GO Enrichment Analysis of Co-expressed Genes with
AT5G62670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 2 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 3 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 4 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 5 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 6 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 7 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 8 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 9 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 10 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 11 | GO:0098586: cellular response to virus | 0.00E+00 |
| 12 | GO:0018298: protein-chromophore linkage | 2.52E-07 |
| 13 | GO:0015979: photosynthesis | 7.53E-07 |
| 14 | GO:0000256: allantoin catabolic process | 8.43E-07 |
| 15 | GO:0009644: response to high light intensity | 1.19E-06 |
| 16 | GO:0010136: ureide catabolic process | 3.17E-06 |
| 17 | GO:0005977: glycogen metabolic process | 3.17E-06 |
| 18 | GO:0006145: purine nucleobase catabolic process | 7.44E-06 |
| 19 | GO:0006021: inositol biosynthetic process | 1.40E-05 |
| 20 | GO:0010021: amylopectin biosynthetic process | 1.40E-05 |
| 21 | GO:0046855: inositol phosphate dephosphorylation | 3.44E-05 |
| 22 | GO:0009645: response to low light intensity stimulus | 6.54E-05 |
| 23 | GO:0019252: starch biosynthetic process | 6.64E-05 |
| 24 | GO:0009642: response to light intensity | 8.48E-05 |
| 25 | GO:0009657: plastid organization | 1.07E-04 |
| 26 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.30E-04 |
| 27 | GO:0033388: putrescine biosynthetic process from arginine | 1.30E-04 |
| 28 | GO:0031426: polycistronic mRNA processing | 1.30E-04 |
| 29 | GO:0071277: cellular response to calcium ion | 1.30E-04 |
| 30 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.30E-04 |
| 31 | GO:1904964: positive regulation of phytol biosynthetic process | 1.30E-04 |
| 32 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.30E-04 |
| 33 | GO:0010028: xanthophyll cycle | 1.30E-04 |
| 34 | GO:0006419: alanyl-tRNA aminoacylation | 1.30E-04 |
| 35 | GO:0010362: negative regulation of anion channel activity by blue light | 1.30E-04 |
| 36 | GO:0015995: chlorophyll biosynthetic process | 1.61E-04 |
| 37 | GO:0007623: circadian rhythm | 2.30E-04 |
| 38 | GO:0006790: sulfur compound metabolic process | 2.53E-04 |
| 39 | GO:0009915: phloem sucrose loading | 2.99E-04 |
| 40 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.99E-04 |
| 41 | GO:0042548: regulation of photosynthesis, light reaction | 2.99E-04 |
| 42 | GO:0009629: response to gravity | 2.99E-04 |
| 43 | GO:0010042: response to manganese ion | 2.99E-04 |
| 44 | GO:0006432: phenylalanyl-tRNA aminoacylation | 2.99E-04 |
| 45 | GO:0009446: putrescine biosynthetic process | 2.99E-04 |
| 46 | GO:0016122: xanthophyll metabolic process | 2.99E-04 |
| 47 | GO:0046741: transport of virus in host, tissue to tissue | 2.99E-04 |
| 48 | GO:0010020: chloroplast fission | 3.27E-04 |
| 49 | GO:0010207: photosystem II assembly | 3.27E-04 |
| 50 | GO:0046854: phosphatidylinositol phosphorylation | 3.67E-04 |
| 51 | GO:0006833: water transport | 4.10E-04 |
| 52 | GO:0090391: granum assembly | 4.92E-04 |
| 53 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.01E-04 |
| 54 | GO:0051016: barbed-end actin filament capping | 7.04E-04 |
| 55 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 7.04E-04 |
| 56 | GO:0043572: plastid fission | 7.04E-04 |
| 57 | GO:0006020: inositol metabolic process | 7.04E-04 |
| 58 | GO:0071484: cellular response to light intensity | 7.04E-04 |
| 59 | GO:0010239: chloroplast mRNA processing | 7.04E-04 |
| 60 | GO:0034220: ion transmembrane transport | 8.26E-04 |
| 61 | GO:0009902: chloroplast relocation | 9.34E-04 |
| 62 | GO:0015994: chlorophyll metabolic process | 9.34E-04 |
| 63 | GO:0016558: protein import into peroxisome matrix | 1.18E-03 |
| 64 | GO:0010117: photoprotection | 1.18E-03 |
| 65 | GO:0009643: photosynthetic acclimation | 1.45E-03 |
| 66 | GO:0042549: photosystem II stabilization | 1.45E-03 |
| 67 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.45E-03 |
| 68 | GO:0010189: vitamin E biosynthetic process | 1.73E-03 |
| 69 | GO:0071470: cellular response to osmotic stress | 1.73E-03 |
| 70 | GO:0010196: nonphotochemical quenching | 2.04E-03 |
| 71 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.04E-03 |
| 72 | GO:0030026: cellular manganese ion homeostasis | 2.04E-03 |
| 73 | GO:0006400: tRNA modification | 2.04E-03 |
| 74 | GO:0009704: de-etiolation | 2.36E-03 |
| 75 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.36E-03 |
| 76 | GO:0016559: peroxisome fission | 2.36E-03 |
| 77 | GO:0048564: photosystem I assembly | 2.36E-03 |
| 78 | GO:0009637: response to blue light | 2.54E-03 |
| 79 | GO:0034599: cellular response to oxidative stress | 2.65E-03 |
| 80 | GO:0017004: cytochrome complex assembly | 2.69E-03 |
| 81 | GO:0009821: alkaloid biosynthetic process | 3.04E-03 |
| 82 | GO:0048507: meristem development | 3.04E-03 |
| 83 | GO:0090333: regulation of stomatal closure | 3.04E-03 |
| 84 | GO:0006783: heme biosynthetic process | 3.04E-03 |
| 85 | GO:0098656: anion transmembrane transport | 3.04E-03 |
| 86 | GO:0010114: response to red light | 3.26E-03 |
| 87 | GO:0009638: phototropism | 3.41E-03 |
| 88 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.41E-03 |
| 89 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.79E-03 |
| 90 | GO:0006259: DNA metabolic process | 3.79E-03 |
| 91 | GO:0055085: transmembrane transport | 3.94E-03 |
| 92 | GO:0009698: phenylpropanoid metabolic process | 4.18E-03 |
| 93 | GO:0009773: photosynthetic electron transport in photosystem I | 4.18E-03 |
| 94 | GO:0006265: DNA topological change | 4.18E-03 |
| 95 | GO:0006415: translational termination | 4.18E-03 |
| 96 | GO:0043085: positive regulation of catalytic activity | 4.18E-03 |
| 97 | GO:0006807: nitrogen compound metabolic process | 5.00E-03 |
| 98 | GO:0006006: glucose metabolic process | 5.00E-03 |
| 99 | GO:0009767: photosynthetic electron transport chain | 5.00E-03 |
| 100 | GO:0005986: sucrose biosynthetic process | 5.00E-03 |
| 101 | GO:0019253: reductive pentose-phosphate cycle | 5.44E-03 |
| 102 | GO:0009266: response to temperature stimulus | 5.44E-03 |
| 103 | GO:0046688: response to copper ion | 5.88E-03 |
| 104 | GO:0019853: L-ascorbic acid biosynthetic process | 5.88E-03 |
| 105 | GO:0006396: RNA processing | 6.40E-03 |
| 106 | GO:0080147: root hair cell development | 6.81E-03 |
| 107 | GO:0006418: tRNA aminoacylation for protein translation | 7.30E-03 |
| 108 | GO:0007017: microtubule-based process | 7.30E-03 |
| 109 | GO:0006825: copper ion transport | 7.30E-03 |
| 110 | GO:0051302: regulation of cell division | 7.30E-03 |
| 111 | GO:0008299: isoprenoid biosynthetic process | 7.30E-03 |
| 112 | GO:0055114: oxidation-reduction process | 7.75E-03 |
| 113 | GO:0009269: response to desiccation | 7.79E-03 |
| 114 | GO:0019748: secondary metabolic process | 8.30E-03 |
| 115 | GO:0006413: translational initiation | 1.00E-02 |
| 116 | GO:0010118: stomatal movement | 1.04E-02 |
| 117 | GO:0006662: glycerol ether metabolic process | 1.10E-02 |
| 118 | GO:0007059: chromosome segregation | 1.16E-02 |
| 119 | GO:0009791: post-embryonic development | 1.22E-02 |
| 120 | GO:0009409: response to cold | 1.26E-02 |
| 121 | GO:0009416: response to light stimulus | 1.26E-02 |
| 122 | GO:0000302: response to reactive oxygen species | 1.28E-02 |
| 123 | GO:0006635: fatty acid beta-oxidation | 1.28E-02 |
| 124 | GO:0007264: small GTPase mediated signal transduction | 1.34E-02 |
| 125 | GO:0046686: response to cadmium ion | 1.56E-02 |
| 126 | GO:0010027: thylakoid membrane organization | 1.66E-02 |
| 127 | GO:0009658: chloroplast organization | 1.67E-02 |
| 128 | GO:0042128: nitrate assimilation | 1.79E-02 |
| 129 | GO:0016311: dephosphorylation | 1.93E-02 |
| 130 | GO:0048481: plant ovule development | 2.00E-02 |
| 131 | GO:0080167: response to karrikin | 2.07E-02 |
| 132 | GO:0000160: phosphorelay signal transduction system | 2.07E-02 |
| 133 | GO:0009813: flavonoid biosynthetic process | 2.07E-02 |
| 134 | GO:0010218: response to far red light | 2.15E-02 |
| 135 | GO:0007568: aging | 2.22E-02 |
| 136 | GO:0009853: photorespiration | 2.37E-02 |
| 137 | GO:0045454: cell redox homeostasis | 2.48E-02 |
| 138 | GO:0006631: fatty acid metabolic process | 2.68E-02 |
| 139 | GO:0009926: auxin polar transport | 2.84E-02 |
| 140 | GO:0008643: carbohydrate transport | 3.00E-02 |
| 141 | GO:0006629: lipid metabolic process | 3.06E-02 |
| 142 | GO:0006979: response to oxidative stress | 3.09E-02 |
| 143 | GO:0006855: drug transmembrane transport | 3.17E-02 |
| 144 | GO:0031347: regulation of defense response | 3.25E-02 |
| 145 | GO:0006812: cation transport | 3.34E-02 |
| 146 | GO:0006364: rRNA processing | 3.51E-02 |
| 147 | GO:0010224: response to UV-B | 3.60E-02 |
| 148 | GO:0006417: regulation of translation | 3.77E-02 |
| 149 | GO:0006096: glycolytic process | 3.95E-02 |
| 150 | GO:0009624: response to nematode | 4.51E-02 |
| 151 | GO:0006810: transport | 4.90E-02 |
| 152 | GO:0009735: response to cytokinin | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 2 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 3 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 4 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 5 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
| 6 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 7 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 8 | GO:0010486: manganese:proton antiporter activity | 0.00E+00 |
| 9 | GO:0050126: N-carbamoylputrescine amidase activity | 0.00E+00 |
| 10 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 11 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 12 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 13 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 14 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 15 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 16 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 17 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 18 | GO:0008934: inositol monophosphate 1-phosphatase activity | 8.43E-07 |
| 19 | GO:0052833: inositol monophosphate 4-phosphatase activity | 8.43E-07 |
| 20 | GO:0019156: isoamylase activity | 8.43E-07 |
| 21 | GO:0052832: inositol monophosphate 3-phosphatase activity | 8.43E-07 |
| 22 | GO:0070402: NADPH binding | 3.17E-06 |
| 23 | GO:0016168: chlorophyll binding | 5.86E-06 |
| 24 | GO:0004556: alpha-amylase activity | 3.44E-05 |
| 25 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 4.86E-05 |
| 26 | GO:0016853: isomerase activity | 5.95E-05 |
| 27 | GO:0004813: alanine-tRNA ligase activity | 1.30E-04 |
| 28 | GO:0004008: copper-exporting ATPase activity | 1.30E-04 |
| 29 | GO:0004830: tryptophan-tRNA ligase activity | 1.30E-04 |
| 30 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.30E-04 |
| 31 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 1.30E-04 |
| 32 | GO:0035671: enone reductase activity | 1.30E-04 |
| 33 | GO:0000049: tRNA binding | 2.53E-04 |
| 34 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 2.99E-04 |
| 35 | GO:0004826: phenylalanine-tRNA ligase activity | 2.99E-04 |
| 36 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.99E-04 |
| 37 | GO:0019172: glyoxalase III activity | 2.99E-04 |
| 38 | GO:0008883: glutamyl-tRNA reductase activity | 2.99E-04 |
| 39 | GO:0031409: pigment binding | 4.10E-04 |
| 40 | GO:0004848: ureidoglycolate hydrolase activity | 4.92E-04 |
| 41 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.92E-04 |
| 42 | GO:0050307: sucrose-phosphate phosphatase activity | 4.92E-04 |
| 43 | GO:0004751: ribose-5-phosphate isomerase activity | 4.92E-04 |
| 44 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 4.92E-04 |
| 45 | GO:0022891: substrate-specific transmembrane transporter activity | 6.54E-04 |
| 46 | GO:0048027: mRNA 5'-UTR binding | 7.04E-04 |
| 47 | GO:0016851: magnesium chelatase activity | 7.04E-04 |
| 48 | GO:0004792: thiosulfate sulfurtransferase activity | 7.04E-04 |
| 49 | GO:0016149: translation release factor activity, codon specific | 7.04E-04 |
| 50 | GO:0009882: blue light photoreceptor activity | 7.04E-04 |
| 51 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 9.34E-04 |
| 52 | GO:0043495: protein anchor | 9.34E-04 |
| 53 | GO:0009011: starch synthase activity | 9.34E-04 |
| 54 | GO:0008453: alanine-glyoxylate transaminase activity | 9.34E-04 |
| 55 | GO:0004462: lactoylglutathione lyase activity | 1.45E-03 |
| 56 | GO:0015250: water channel activity | 1.55E-03 |
| 57 | GO:0019899: enzyme binding | 2.04E-03 |
| 58 | GO:0042802: identical protein binding | 2.20E-03 |
| 59 | GO:0004033: aldo-keto reductase (NADP) activity | 2.36E-03 |
| 60 | GO:0103095: wax ester synthase activity | 2.69E-03 |
| 61 | GO:0005375: copper ion transmembrane transporter activity | 2.69E-03 |
| 62 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.69E-03 |
| 63 | GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity | 2.69E-03 |
| 64 | GO:0050661: NADP binding | 2.88E-03 |
| 65 | GO:0003747: translation release factor activity | 3.04E-03 |
| 66 | GO:0004185: serine-type carboxypeptidase activity | 3.26E-03 |
| 67 | GO:0005384: manganese ion transmembrane transporter activity | 3.41E-03 |
| 68 | GO:0016844: strictosidine synthase activity | 3.41E-03 |
| 69 | GO:0008047: enzyme activator activity | 3.79E-03 |
| 70 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 4.18E-03 |
| 71 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.00E-03 |
| 72 | GO:0008081: phosphoric diester hydrolase activity | 5.00E-03 |
| 73 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.00E-03 |
| 74 | GO:0031072: heat shock protein binding | 5.00E-03 |
| 75 | GO:0000155: phosphorelay sensor kinase activity | 5.00E-03 |
| 76 | GO:0046872: metal ion binding | 5.76E-03 |
| 77 | GO:0003924: GTPase activity | 6.08E-03 |
| 78 | GO:0008324: cation transmembrane transporter activity | 7.30E-03 |
| 79 | GO:0003727: single-stranded RNA binding | 9.35E-03 |
| 80 | GO:0008514: organic anion transmembrane transporter activity | 9.35E-03 |
| 81 | GO:0047134: protein-disulfide reductase activity | 9.90E-03 |
| 82 | GO:0004812: aminoacyl-tRNA ligase activity | 9.90E-03 |
| 83 | GO:0016887: ATPase activity | 1.06E-02 |
| 84 | GO:0010181: FMN binding | 1.16E-02 |
| 85 | GO:0004791: thioredoxin-disulfide reductase activity | 1.16E-02 |
| 86 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.40E-02 |
| 87 | GO:0008237: metallopeptidase activity | 1.53E-02 |
| 88 | GO:0016597: amino acid binding | 1.59E-02 |
| 89 | GO:0015238: drug transmembrane transporter activity | 2.07E-02 |
| 90 | GO:0050897: cobalt ion binding | 2.22E-02 |
| 91 | GO:0030145: manganese ion binding | 2.22E-02 |
| 92 | GO:0052689: carboxylic ester hydrolase activity | 2.29E-02 |
| 93 | GO:0005525: GTP binding | 2.36E-02 |
| 94 | GO:0004364: glutathione transferase activity | 2.76E-02 |
| 95 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.00E-02 |
| 96 | GO:0043621: protein self-association | 3.00E-02 |
| 97 | GO:0051287: NAD binding | 3.25E-02 |
| 98 | GO:0009055: electron carrier activity | 3.28E-02 |
| 99 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.04E-02 |
| 100 | GO:0003779: actin binding | 4.41E-02 |
| 101 | GO:0051082: unfolded protein binding | 4.51E-02 |
| 102 | GO:0016746: transferase activity, transferring acyl groups | 4.60E-02 |
| 103 | GO:0015035: protein disulfide oxidoreductase activity | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.76E-25 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 6.33E-16 |
| 4 | GO:0009941: chloroplast envelope | 4.72E-12 |
| 5 | GO:0009534: chloroplast thylakoid | 6.20E-10 |
| 6 | GO:0009570: chloroplast stroma | 5.52E-09 |
| 7 | GO:0009523: photosystem II | 1.96E-06 |
| 8 | GO:0010287: plastoglobule | 1.20E-04 |
| 9 | GO:0009515: granal stacked thylakoid | 1.30E-04 |
| 10 | GO:0009782: photosystem I antenna complex | 1.30E-04 |
| 11 | GO:0009579: thylakoid | 1.52E-04 |
| 12 | GO:0008290: F-actin capping protein complex | 2.99E-04 |
| 13 | GO:0030076: light-harvesting complex | 3.67E-04 |
| 14 | GO:0010007: magnesium chelatase complex | 4.92E-04 |
| 15 | GO:0042651: thylakoid membrane | 5.01E-04 |
| 16 | GO:0009706: chloroplast inner membrane | 8.26E-04 |
| 17 | GO:0009517: PSII associated light-harvesting complex II | 9.34E-04 |
| 18 | GO:0030286: dynein complex | 9.34E-04 |
| 19 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 9.34E-04 |
| 20 | GO:0005778: peroxisomal membrane | 1.38E-03 |
| 21 | GO:0009707: chloroplast outer membrane | 2.01E-03 |
| 22 | GO:0042644: chloroplast nucleoid | 3.04E-03 |
| 23 | GO:0016020: membrane | 3.91E-03 |
| 24 | GO:0043234: protein complex | 6.34E-03 |
| 25 | GO:0009654: photosystem II oxygen evolving complex | 7.30E-03 |
| 26 | GO:0005759: mitochondrial matrix | 9.79E-03 |
| 27 | GO:0005770: late endosome | 1.10E-02 |
| 28 | GO:0009522: photosystem I | 1.16E-02 |
| 29 | GO:0019898: extrinsic component of membrane | 1.22E-02 |
| 30 | GO:0009295: nucleoid | 1.53E-02 |
| 31 | GO:0010319: stromule | 1.53E-02 |
| 32 | GO:0031969: chloroplast membrane | 2.07E-02 |
| 33 | GO:0031902: late endosome membrane | 2.68E-02 |
| 34 | GO:0031977: thylakoid lumen | 2.68E-02 |
| 35 | GO:0005747: mitochondrial respiratory chain complex I | 4.04E-02 |
| 36 | GO:0005887: integral component of plasma membrane | 4.14E-02 |