Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G62530

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042908: xenobiotic transport0.00E+00
2GO:0006593: ornithine catabolic process0.00E+00
3GO:0043171: peptide catabolic process0.00E+00
4GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport0.00E+00
5GO:0046686: response to cadmium ion2.44E-06
6GO:0009684: indoleacetic acid biosynthetic process1.33E-05
7GO:0019544: arginine catabolic process to glutamate1.97E-05
8GO:0006148: inosine catabolic process1.97E-05
9GO:0000305: response to oxygen radical1.97E-05
10GO:1903409: reactive oxygen species biosynthetic process1.97E-05
11GO:0005975: carbohydrate metabolic process3.64E-05
12GO:0032527: protein exit from endoplasmic reticulum5.10E-05
13GO:0019388: galactose catabolic process5.10E-05
14GO:0045493: xylan catabolic process9.05E-05
15GO:0051646: mitochondrion localization9.05E-05
16GO:0009590: detection of gravity1.36E-04
17GO:1902476: chloride transmembrane transport1.36E-04
18GO:0015700: arsenite transport1.36E-04
19GO:0009816: defense response to bacterium, incompatible interaction1.48E-04
20GO:0006542: glutamine biosynthetic process1.86E-04
21GO:0051781: positive regulation of cell division1.86E-04
22GO:0006749: glutathione metabolic process1.86E-04
23GO:0007029: endoplasmic reticulum organization2.40E-04
24GO:0006561: proline biosynthetic process2.97E-04
25GO:0042732: D-xylose metabolic process2.97E-04
26GO:0006821: chloride transport4.19E-04
27GO:0005978: glycogen biosynthetic process4.84E-04
28GO:0015996: chlorophyll catabolic process5.50E-04
29GO:0046685: response to arsenic-containing substance6.19E-04
30GO:0006098: pentose-phosphate shunt6.19E-04
31GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process6.90E-04
32GO:0048354: mucilage biosynthetic process involved in seed coat development6.90E-04
33GO:0010192: mucilage biosynthetic process7.62E-04
34GO:0048229: gametophyte development8.37E-04
35GO:0071365: cellular response to auxin stimulus9.12E-04
36GO:0010150: leaf senescence9.77E-04
37GO:0006108: malate metabolic process9.90E-04
38GO:0006006: glucose metabolic process9.90E-04
39GO:0009725: response to hormone9.90E-04
40GO:0006094: gluconeogenesis9.90E-04
41GO:0010102: lateral root morphogenesis9.90E-04
42GO:0006807: nitrogen compound metabolic process9.90E-04
43GO:0009833: plant-type primary cell wall biogenesis1.23E-03
44GO:0019762: glucosinolate catabolic process1.23E-03
45GO:0009695: jasmonic acid biosynthetic process1.41E-03
46GO:0031408: oxylipin biosynthetic process1.50E-03
47GO:0019748: secondary metabolic process1.59E-03
48GO:0000271: polysaccharide biosynthetic process1.98E-03
49GO:0010154: fruit development2.08E-03
50GO:0019252: starch biosynthetic process2.29E-03
51GO:0009627: systemic acquired resistance3.31E-03
52GO:0042128: nitrate assimilation3.31E-03
53GO:0008219: cell death3.68E-03
54GO:0009817: defense response to fungus, incompatible interaction3.68E-03
55GO:0030244: cellulose biosynthetic process3.68E-03
56GO:0009813: flavonoid biosynthetic process3.80E-03
57GO:0010311: lateral root formation3.80E-03
58GO:0006099: tricarboxylic acid cycle4.45E-03
59GO:0009926: auxin polar transport5.13E-03
60GO:0009636: response to toxic substance5.56E-03
61GO:0006508: proteolysis5.63E-03
62GO:0006855: drug transmembrane transport5.71E-03
63GO:0055085: transmembrane transport5.96E-03
64GO:0042538: hyperosmotic salinity response6.00E-03
65GO:0009651: response to salt stress6.30E-03
66GO:0006096: glycolytic process7.08E-03
67GO:0009626: plant-type hypersensitive response7.40E-03
68GO:0071555: cell wall organization9.51E-03
69GO:0009058: biosynthetic process9.78E-03
70GO:0055114: oxidation-reduction process9.90E-03
71GO:0010468: regulation of gene expression1.34E-02
72GO:0009617: response to bacterium1.34E-02
73GO:0045454: cell redox homeostasis2.13E-02
74GO:0006886: intracellular protein transport2.18E-02
75GO:0009734: auxin-activated signaling pathway3.16E-02
76GO:0009908: flower development3.47E-02
RankGO TermAdjusted P value
1GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity0.00E+00
2GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
3GO:0009045: xylose isomerase activity0.00E+00
4GO:0032441: pheophorbide a oxygenase activity0.00E+00
5GO:0080109: indole-3-acetonitrile nitrile hydratase activity3.07E-08
6GO:0080061: indole-3-acetonitrile nitrilase activity1.20E-07
7GO:0000257: nitrilase activity2.94E-07
8GO:0008559: xenobiotic-transporting ATPase activity1.33E-05
9GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor1.97E-05
10GO:0016229: steroid dehydrogenase activity1.97E-05
11GO:0004347: glucose-6-phosphate isomerase activity1.97E-05
12GO:0010013: N-1-naphthylphthalamic acid binding1.97E-05
13GO:0001530: lipopolysaccharide binding1.97E-05
14GO:0070401: NADP+ binding1.97E-05
15GO:0015446: ATPase-coupled arsenite transmembrane transporter activity1.97E-05
16GO:0009671: nitrate:proton symporter activity1.97E-05
17GO:0045437: uridine nucleosidase activity1.97E-05
18GO:0070006: metalloaminopeptidase activity1.97E-05
19GO:0004321: fatty-acyl-CoA synthase activity1.97E-05
20GO:0071992: phytochelatin transmembrane transporter activity1.97E-05
21GO:0004362: glutathione-disulfide reductase activity5.10E-05
22GO:0004566: beta-glucuronidase activity5.10E-05
23GO:0047724: inosine nucleosidase activity5.10E-05
24GO:0047517: 1,4-beta-D-xylan synthase activity5.10E-05
25GO:0004614: phosphoglucomutase activity5.10E-05
26GO:0052692: raffinose alpha-galactosidase activity9.05E-05
27GO:0010277: chlorophyllide a oxygenase [overall] activity9.05E-05
28GO:0004557: alpha-galactosidase activity9.05E-05
29GO:0042277: peptide binding1.86E-04
30GO:0080032: methyl jasmonate esterase activity1.86E-04
31GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1.86E-04
32GO:0009044: xylan 1,4-beta-xylosidase activity1.86E-04
33GO:0005253: anion channel activity1.86E-04
34GO:0004356: glutamate-ammonia ligase activity2.40E-04
35GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity2.97E-04
36GO:0016615: malate dehydrogenase activity2.97E-04
37GO:0005247: voltage-gated chloride channel activity2.97E-04
38GO:0080030: methyl indole-3-acetate esterase activity2.97E-04
39GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity2.97E-04
40GO:0030060: L-malate dehydrogenase activity3.57E-04
41GO:0004033: aldo-keto reductase (NADP) activity4.84E-04
42GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity6.19E-04
43GO:0016207: 4-coumarate-CoA ligase activity6.19E-04
44GO:0030170: pyridoxal phosphate binding7.96E-04
45GO:0004177: aminopeptidase activity8.37E-04
46GO:0005507: copper ion binding8.89E-04
47GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.22E-03
48GO:0051536: iron-sulfur cluster binding1.32E-03
49GO:0035251: UDP-glucosyltransferase activity1.50E-03
50GO:0016788: hydrolase activity, acting on ester bonds1.51E-03
51GO:0016760: cellulose synthase (UDP-forming) activity1.68E-03
52GO:0016759: cellulose synthase activity2.73E-03
53GO:0051213: dioxygenase activity3.07E-03
54GO:0016798: hydrolase activity, acting on glycosyl bonds3.43E-03
55GO:0102483: scopolin beta-glucosidase activity3.43E-03
56GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.32E-03
57GO:0008422: beta-glucosidase activity4.58E-03
58GO:0050661: NADP binding4.72E-03
59GO:0004185: serine-type carboxypeptidase activity5.13E-03
60GO:0051537: 2 iron, 2 sulfur cluster binding5.42E-03
61GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds6.20E-03
62GO:0016298: lipase activity6.46E-03
63GO:0005516: calmodulin binding7.06E-03
64GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups7.24E-03
65GO:0016874: ligase activity7.72E-03
66GO:0004252: serine-type endopeptidase activity1.01E-02
67GO:0042802: identical protein binding1.40E-02
68GO:0000287: magnesium ion binding1.59E-02
69GO:0050660: flavin adenine dinucleotide binding1.78E-02
70GO:0052689: carboxylic ester hydrolase activity2.01E-02
71GO:0008270: zinc ion binding2.47E-02
72GO:0008289: lipid binding3.13E-02
73GO:0046872: metal ion binding4.22E-02
74GO:0016740: transferase activity4.29E-02
RankGO TermAdjusted P value
1GO:0005759: mitochondrial matrix5.42E-05
2GO:0000325: plant-type vacuole2.16E-04
3GO:0048046: apoplast2.29E-04
4GO:0005829: cytosol2.65E-04
5GO:0010168: ER body2.97E-04
6GO:0034707: chloride channel complex2.97E-04
7GO:0005773: vacuole4.62E-04
8GO:0031090: organelle membrane6.19E-04
9GO:0005737: cytoplasm6.75E-04
10GO:0005777: peroxisome6.81E-04
11GO:0005765: lysosomal membrane8.37E-04
12GO:0009705: plant-type vacuole membrane9.77E-04
13GO:0005578: proteinaceous extracellular matrix9.90E-04
14GO:0005774: vacuolar membrane1.22E-03
15GO:0010319: stromule2.84E-03
16GO:0005576: extracellular region3.03E-03
17GO:0005783: endoplasmic reticulum3.54E-03
18GO:0019005: SCF ubiquitin ligase complex3.68E-03
19GO:0009706: chloroplast inner membrane8.05E-03
20GO:0005622: intracellular8.34E-03
21GO:0005623: cell9.60E-03
22GO:0009505: plant-type cell wall1.19E-02
23GO:0005615: extracellular space1.28E-02
24GO:0005794: Golgi apparatus1.48E-02
25GO:0009506: plasmodesma3.56E-02
26GO:0022626: cytosolic ribosome3.61E-02
27GO:0005618: cell wall3.78E-02
28GO:0009534: chloroplast thylakoid4.26E-02
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Gene type



Gene DE type