Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G61780

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009560: embryo sac egg cell differentiation0.00E+00
2GO:0010245: radial microtubular system formation0.00E+00
3GO:0034263: positive regulation of autophagy in response to ER overload0.00E+00
4GO:0090352: regulation of nitrate assimilation0.00E+00
5GO:2001142: nicotinate transport0.00E+00
6GO:0042353: fucose biosynthetic process0.00E+00
7GO:0010247: detection of phosphate ion0.00E+00
8GO:0010046: response to mycotoxin0.00E+00
9GO:0019481: L-alanine catabolic process, by transamination0.00E+00
10GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
11GO:0009268: response to pH0.00E+00
12GO:0032499: detection of peptidoglycan0.00E+00
13GO:2001143: N-methylnicotinate transport0.00E+00
14GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
15GO:0009699: phenylpropanoid biosynthetic process7.15E-06
16GO:0006468: protein phosphorylation8.29E-06
17GO:0002679: respiratory burst involved in defense response2.34E-05
18GO:0051131: chaperone-mediated protein complex assembly2.34E-05
19GO:1902347: response to strigolactone4.26E-05
20GO:0010337: regulation of salicylic acid metabolic process9.94E-05
21GO:0046777: protein autophosphorylation1.07E-04
22GO:2000070: regulation of response to water deprivation2.28E-04
23GO:0045010: actin nucleation2.28E-04
24GO:0015853: adenine transport2.48E-04
25GO:0006562: proline catabolic process2.48E-04
26GO:0018920: glyphosate metabolic process2.48E-04
27GO:0015854: guanine transport2.48E-04
28GO:0010113: negative regulation of systemic acquired resistance2.48E-04
29GO:0080157: regulation of plant-type cell wall organization or biogenesis2.48E-04
30GO:0099636: cytoplasmic streaming2.48E-04
31GO:0032491: detection of molecule of fungal origin2.48E-04
32GO:0051014: actin filament severing2.48E-04
33GO:0071277: cellular response to calcium ion2.48E-04
34GO:0034628: 'de novo' NAD biosynthetic process from aspartate2.48E-04
35GO:0009966: regulation of signal transduction2.48E-04
36GO:0051865: protein autoubiquitination3.41E-04
37GO:0019538: protein metabolic process4.74E-04
38GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.75E-04
39GO:0009816: defense response to bacterium, incompatible interaction4.75E-04
40GO:0010015: root morphogenesis5.47E-04
41GO:0006611: protein export from nucleus5.49E-04
42GO:0042754: negative regulation of circadian rhythm5.49E-04
43GO:0010289: homogalacturonan biosynthetic process5.49E-04
44GO:0043255: regulation of carbohydrate biosynthetic process5.49E-04
45GO:2000030: regulation of response to red or far red light5.49E-04
46GO:0046939: nucleotide phosphorylation5.49E-04
47GO:0010155: regulation of proton transport5.49E-04
48GO:0010133: proline catabolic process to glutamate5.49E-04
49GO:0010200: response to chitin5.73E-04
50GO:0009414: response to water deprivation8.26E-04
51GO:0016051: carbohydrate biosynthetic process8.35E-04
52GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation8.92E-04
53GO:0010447: response to acidic pH8.92E-04
54GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'8.92E-04
55GO:0080168: abscisic acid transport8.92E-04
56GO:0070475: rRNA base methylation8.92E-04
57GO:0051176: positive regulation of sulfur metabolic process8.92E-04
58GO:0006081: cellular aldehyde metabolic process8.92E-04
59GO:0000055: ribosomal large subunit export from nucleus8.92E-04
60GO:0009408: response to heat1.07E-03
61GO:0009863: salicylic acid mediated signaling pathway1.09E-03
62GO:0006537: glutamate biosynthetic process1.27E-03
63GO:0033014: tetrapyrrole biosynthetic process1.27E-03
64GO:0030100: regulation of endocytosis1.27E-03
65GO:0071323: cellular response to chitin1.27E-03
66GO:0009399: nitrogen fixation1.27E-03
67GO:0009558: embryo sac cellularization1.27E-03
68GO:0006986: response to unfolded protein1.27E-03
69GO:0061077: chaperone-mediated protein folding1.32E-03
70GO:0009737: response to abscisic acid1.50E-03
71GO:0015743: malate transport1.70E-03
72GO:0033320: UDP-D-xylose biosynthetic process1.70E-03
73GO:0010483: pollen tube reception1.70E-03
74GO:0051764: actin crosslink formation1.70E-03
75GO:0071219: cellular response to molecule of bacterial origin1.70E-03
76GO:0006536: glutamate metabolic process1.70E-03
77GO:0001709: cell fate determination1.70E-03
78GO:0007112: male meiosis cytokinesis1.70E-03
79GO:0009694: jasmonic acid metabolic process1.70E-03
80GO:0009435: NAD biosynthetic process2.17E-03
81GO:0030308: negative regulation of cell growth2.17E-03
82GO:0006090: pyruvate metabolic process2.17E-03
83GO:0030041: actin filament polymerization2.17E-03
84GO:0045487: gibberellin catabolic process2.17E-03
85GO:0007029: endoplasmic reticulum organization2.17E-03
86GO:0048544: recognition of pollen2.31E-03
87GO:0010193: response to ozone2.64E-03
88GO:0010256: endomembrane system organization2.67E-03
89GO:0000470: maturation of LSU-rRNA2.67E-03
90GO:0042732: D-xylose metabolic process2.67E-03
91GO:0048317: seed morphogenesis2.67E-03
92GO:0016070: RNA metabolic process2.67E-03
93GO:0009611: response to wounding3.04E-03
94GO:0035556: intracellular signal transduction3.21E-03
95GO:0009423: chorismate biosynthetic process3.21E-03
96GO:0009861: jasmonic acid and ethylene-dependent systemic resistance3.21E-03
97GO:0010286: heat acclimation3.40E-03
98GO:0006955: immune response3.79E-03
99GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway3.79E-03
100GO:0006744: ubiquinone biosynthetic process3.79E-03
101GO:0051693: actin filament capping3.79E-03
102GO:0010044: response to aluminum ion3.79E-03
103GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.79E-03
104GO:0006401: RNA catabolic process3.79E-03
105GO:0009787: regulation of abscisic acid-activated signaling pathway4.39E-03
106GO:1900150: regulation of defense response to fungus4.39E-03
107GO:0050821: protein stabilization4.39E-03
108GO:0048658: anther wall tapetum development4.39E-03
109GO:0006457: protein folding4.60E-03
110GO:0010208: pollen wall assembly5.03E-03
111GO:0009932: cell tip growth5.03E-03
112GO:0060321: acceptance of pollen5.03E-03
113GO:0030968: endoplasmic reticulum unfolded protein response5.03E-03
114GO:0009808: lignin metabolic process5.03E-03
115GO:0009834: plant-type secondary cell wall biogenesis5.48E-03
116GO:0098656: anion transmembrane transport5.70E-03
117GO:0007338: single fertilization5.70E-03
118GO:0046685: response to arsenic-containing substance5.70E-03
119GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay5.70E-03
120GO:0006783: heme biosynthetic process5.70E-03
121GO:0048589: developmental growth5.70E-03
122GO:0009060: aerobic respiration5.70E-03
123GO:0045087: innate immune response6.30E-03
124GO:0006779: porphyrin-containing compound biosynthetic process6.40E-03
125GO:0090332: stomatal closure6.40E-03
126GO:0030042: actin filament depolymerization6.40E-03
127GO:0008202: steroid metabolic process6.40E-03
128GO:0009870: defense response signaling pathway, resistance gene-dependent7.12E-03
129GO:0006782: protoporphyrinogen IX biosynthetic process7.12E-03
130GO:0048829: root cap development7.12E-03
131GO:0009698: phenylpropanoid metabolic process7.88E-03
132GO:0009073: aromatic amino acid family biosynthetic process7.88E-03
133GO:0048229: gametophyte development7.88E-03
134GO:0006820: anion transport8.66E-03
135GO:0010105: negative regulation of ethylene-activated signaling pathway8.66E-03
136GO:0016925: protein sumoylation8.66E-03
137GO:0071365: cellular response to auxin stimulus8.66E-03
138GO:0006108: malate metabolic process9.47E-03
139GO:0050826: response to freezing9.47E-03
140GO:0018107: peptidyl-threonine phosphorylation9.47E-03
141GO:0055046: microgametogenesis9.47E-03
142GO:0006970: response to osmotic stress9.99E-03
143GO:0007015: actin filament organization1.03E-02
144GO:0006446: regulation of translational initiation1.03E-02
145GO:0009809: lignin biosynthetic process1.10E-02
146GO:0006364: rRNA processing1.10E-02
147GO:0009555: pollen development1.11E-02
148GO:0009969: xyloglucan biosynthetic process1.12E-02
149GO:0009225: nucleotide-sugar metabolic process1.12E-02
150GO:0090351: seedling development1.12E-02
151GO:0046854: phosphatidylinositol phosphorylation1.12E-02
152GO:0080167: response to karrikin1.20E-02
153GO:0006863: purine nucleobase transport1.21E-02
154GO:0009833: plant-type primary cell wall biogenesis1.21E-02
155GO:0051017: actin filament bundle assembly1.30E-02
156GO:0007010: cytoskeleton organization1.30E-02
157GO:0010187: negative regulation of seed germination1.30E-02
158GO:2000377: regulation of reactive oxygen species metabolic process1.30E-02
159GO:0009695: jasmonic acid biosynthetic process1.39E-02
160GO:0006952: defense response1.43E-02
161GO:0009620: response to fungus1.43E-02
162GO:0016998: cell wall macromolecule catabolic process1.49E-02
163GO:0051260: protein homooligomerization1.49E-02
164GO:0009553: embryo sac development1.52E-02
165GO:0006886: intracellular protein transport1.56E-02
166GO:0009624: response to nematode1.57E-02
167GO:0016226: iron-sulfur cluster assembly1.59E-02
168GO:0030433: ubiquitin-dependent ERAD pathway1.59E-02
169GO:0031348: negative regulation of defense response1.59E-02
170GO:0018105: peptidyl-serine phosphorylation1.61E-02
171GO:0009742: brassinosteroid mediated signaling pathway1.66E-02
172GO:0071215: cellular response to abscisic acid stimulus1.69E-02
173GO:0009686: gibberellin biosynthetic process1.69E-02
174GO:0040007: growth1.69E-02
175GO:0016310: phosphorylation1.72E-02
176GO:0006817: phosphate ion transport1.79E-02
177GO:0042631: cellular response to water deprivation2.01E-02
178GO:0010501: RNA secondary structure unwinding2.01E-02
179GO:0009741: response to brassinosteroid2.12E-02
180GO:0009960: endosperm development2.12E-02
181GO:0045489: pectin biosynthetic process2.12E-02
182GO:0007018: microtubule-based movement2.23E-02
183GO:0009791: post-embryonic development2.34E-02
184GO:0010183: pollen tube guidance2.34E-02
185GO:0009749: response to glucose2.34E-02
186GO:0006891: intra-Golgi vesicle-mediated transport2.46E-02
187GO:0006413: translational initiation2.53E-02
188GO:0032502: developmental process2.58E-02
189GO:0010090: trichome morphogenesis2.70E-02
190GO:0009873: ethylene-activated signaling pathway2.70E-02
191GO:1901657: glycosyl compound metabolic process2.70E-02
192GO:0007623: circadian rhythm2.71E-02
193GO:0009639: response to red or far red light2.82E-02
194GO:0006914: autophagy2.82E-02
195GO:0007267: cell-cell signaling2.94E-02
196GO:0000910: cytokinesis3.07E-02
197GO:0007166: cell surface receptor signaling pathway3.10E-02
198GO:0001666: response to hypoxia3.19E-02
199GO:0042742: defense response to bacterium3.19E-02
200GO:0009615: response to virus3.19E-02
201GO:0009627: systemic acquired resistance3.46E-02
202GO:0015995: chlorophyll biosynthetic process3.59E-02
203GO:0048573: photoperiodism, flowering3.59E-02
204GO:0016049: cell growth3.72E-02
205GO:0009738: abscisic acid-activated signaling pathway3.84E-02
206GO:0048481: plant ovule development3.86E-02
207GO:0009817: defense response to fungus, incompatible interaction3.86E-02
208GO:0030244: cellulose biosynthetic process3.86E-02
209GO:0008219: cell death3.86E-02
210GO:0048767: root hair elongation4.00E-02
211GO:0010311: lateral root formation4.00E-02
212GO:0006499: N-terminal protein myristoylation4.14E-02
213GO:0009910: negative regulation of flower development4.28E-02
214GO:0010119: regulation of stomatal movement4.28E-02
215GO:0009637: response to blue light4.56E-02
216GO:0009723: response to ethylene4.83E-02
217GO:0048366: leaf development4.91E-02
RankGO TermAdjusted P value
1GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
2GO:0090416: nicotinate transporter activity0.00E+00
3GO:0010857: calcium-dependent protein kinase activity0.00E+00
4GO:0033721: aldehyde dehydrogenase (NADP+) activity0.00E+00
5GO:0070566: adenylyltransferase activity0.00E+00
6GO:0008987: quinolinate synthetase A activity0.00E+00
7GO:0005522: profilin binding0.00E+00
8GO:0016710: trans-cinnamate 4-monooxygenase activity0.00E+00
9GO:2001080: chitosan binding0.00E+00
10GO:0047734: CDP-glycerol diphosphatase activity0.00E+00
11GO:0090417: N-methylnicotinate transporter activity0.00E+00
12GO:0030621: U4 snRNA binding0.00E+00
13GO:0080123: jasmonate-amino synthetase activity0.00E+00
14GO:0005524: ATP binding1.29E-09
15GO:0016301: kinase activity9.60E-07
16GO:0004674: protein serine/threonine kinase activity2.85E-06
17GO:0004672: protein kinase activity3.66E-05
18GO:0004657: proline dehydrogenase activity2.48E-04
19GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.48E-04
20GO:0030544: Hsp70 protein binding2.48E-04
21GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity2.48E-04
22GO:0090440: abscisic acid transporter activity2.48E-04
23GO:0017151: DEAD/H-box RNA helicase binding2.48E-04
24GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity2.48E-04
25GO:0003779: actin binding3.98E-04
26GO:0051082: unfolded protein binding4.17E-04
27GO:0004103: choline kinase activity5.49E-04
28GO:0008883: glutamyl-tRNA reductase activity5.49E-04
29GO:0046423: allene-oxide cyclase activity8.92E-04
30GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity8.92E-04
31GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity8.92E-04
32GO:0004351: glutamate decarboxylase activity1.27E-03
33GO:0019201: nucleotide kinase activity1.27E-03
34GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.27E-03
35GO:0019789: SUMO transferase activity1.27E-03
36GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.27E-03
37GO:0043023: ribosomal large subunit binding1.27E-03
38GO:0004540: ribonuclease activity1.32E-03
39GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.44E-03
40GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity1.70E-03
41GO:0004470: malic enzyme activity1.70E-03
42GO:0043015: gamma-tubulin binding1.70E-03
43GO:0005253: anion channel activity1.70E-03
44GO:0019199: transmembrane receptor protein kinase activity1.70E-03
45GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor1.70E-03
46GO:0017070: U6 snRNA binding2.17E-03
47GO:0008381: mechanically-gated ion channel activity2.17E-03
48GO:0018685: alkane 1-monooxygenase activity2.17E-03
49GO:0008948: oxaloacetate decarboxylase activity2.17E-03
50GO:0047631: ADP-ribose diphosphatase activity2.17E-03
51GO:0002020: protease binding2.17E-03
52GO:0004356: glutamate-ammonia ligase activity2.17E-03
53GO:0048040: UDP-glucuronate decarboxylase activity2.67E-03
54GO:0004029: aldehyde dehydrogenase (NAD) activity2.67E-03
55GO:0035673: oligopeptide transmembrane transporter activity2.67E-03
56GO:0051015: actin filament binding3.01E-03
57GO:0070403: NAD+ binding3.21E-03
58GO:0004017: adenylate kinase activity3.21E-03
59GO:0004723: calcium-dependent protein serine/threonine phosphatase activity3.21E-03
60GO:0102425: myricetin 3-O-glucosyltransferase activity3.79E-03
61GO:0102360: daphnetin 3-O-glucosyltransferase activity3.79E-03
62GO:0016621: cinnamoyl-CoA reductase activity3.79E-03
63GO:0019899: enzyme binding3.79E-03
64GO:0015140: malate transmembrane transporter activity3.79E-03
65GO:0004143: diacylglycerol kinase activity3.79E-03
66GO:0008375: acetylglucosaminyltransferase activity4.26E-03
67GO:0047893: flavonol 3-O-glucosyltransferase activity4.39E-03
68GO:0016757: transferase activity, transferring glycosyl groups4.58E-03
69GO:0008142: oxysterol binding5.03E-03
70GO:0003951: NAD+ kinase activity5.03E-03
71GO:0004430: 1-phosphatidylinositol 4-kinase activity5.03E-03
72GO:0016207: 4-coumarate-CoA ligase activity5.70E-03
73GO:0016614: oxidoreductase activity, acting on CH-OH group of donors5.75E-03
74GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity6.40E-03
75GO:0004712: protein serine/threonine/tyrosine kinase activity6.88E-03
76GO:0008047: enzyme activator activity7.12E-03
77GO:0004521: endoribonuclease activity8.66E-03
78GO:0015198: oligopeptide transporter activity8.66E-03
79GO:0019888: protein phosphatase regulator activity9.47E-03
80GO:0000175: 3'-5'-exoribonuclease activity9.47E-03
81GO:0005315: inorganic phosphate transmembrane transporter activity9.47E-03
82GO:0008061: chitin binding1.12E-02
83GO:0051087: chaperone binding1.39E-02
84GO:0005345: purine nucleobase transmembrane transporter activity1.39E-02
85GO:0022857: transmembrane transporter activity1.47E-02
86GO:0016874: ligase activity1.47E-02
87GO:0035251: UDP-glucosyltransferase activity1.49E-02
88GO:0008026: ATP-dependent helicase activity1.66E-02
89GO:0022891: substrate-specific transmembrane transporter activity1.69E-02
90GO:0016760: cellulose synthase (UDP-forming) activity1.69E-02
91GO:0004842: ubiquitin-protein transferase activity1.75E-02
92GO:0008514: organic anion transmembrane transporter activity1.79E-02
93GO:0016758: transferase activity, transferring hexosyl groups1.91E-02
94GO:0005516: calmodulin binding2.06E-02
95GO:0008536: Ran GTPase binding2.12E-02
96GO:0050662: coenzyme binding2.23E-02
97GO:0008565: protein transporter activity2.35E-02
98GO:0015144: carbohydrate transmembrane transporter activity2.35E-02
99GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.53E-02
100GO:0005351: sugar:proton symporter activity2.65E-02
101GO:0016759: cellulose synthase activity2.82E-02
102GO:0008017: microtubule binding2.84E-02
103GO:0003743: translation initiation factor activity3.17E-02
104GO:0016887: ATPase activity3.39E-02
105GO:0009931: calcium-dependent protein serine/threonine kinase activity3.46E-02
106GO:0102483: scopolin beta-glucosidase activity3.59E-02
107GO:0004004: ATP-dependent RNA helicase activity3.59E-02
108GO:0030247: polysaccharide binding3.59E-02
109GO:0004683: calmodulin-dependent protein kinase activity3.59E-02
110GO:0015238: drug transmembrane transporter activity4.00E-02
111GO:0050897: cobalt ion binding4.28E-02
112GO:0050660: flavin adenine dinucleotide binding4.83E-02
113GO:0008422: beta-glucosidase activity4.86E-02
RankGO TermAdjusted P value
1GO:0043680: filiform apparatus0.00E+00
2GO:0005886: plasma membrane2.42E-09
3GO:0009506: plasmodesma1.36E-04
4GO:0005768: endosome1.74E-04
5GO:0005911: cell-cell junction2.48E-04
6GO:0030688: preribosome, small subunit precursor2.48E-04
7GO:0005829: cytosol3.97E-04
8GO:0005794: Golgi apparatus4.93E-04
9GO:0016020: membrane5.06E-04
10GO:0005802: trans-Golgi network5.18E-04
11GO:0016021: integral component of membrane1.31E-03
12GO:0000178: exosome (RNase complex)2.17E-03
13GO:0032580: Golgi cisterna membrane3.20E-03
14GO:0030173: integral component of Golgi membrane3.21E-03
15GO:0016363: nuclear matrix3.21E-03
16GO:0046540: U4/U6 x U5 tri-snRNP complex5.03E-03
17GO:0090404: pollen tube tip7.88E-03
18GO:0005884: actin filament7.88E-03
19GO:0019013: viral nucleocapsid9.47E-03
20GO:0005795: Golgi stack1.12E-02
21GO:0010008: endosome membrane1.34E-02
22GO:0016607: nuclear speck1.34E-02
23GO:0030136: clathrin-coated vesicle1.90E-02
24GO:0005871: kinesin complex1.90E-02
25GO:0009524: phragmoplast2.07E-02
26GO:0005770: late endosome2.12E-02
27GO:0005737: cytoplasm2.45E-02
28GO:0000145: exocyst2.58E-02
29GO:0005778: peroxisomal membrane2.94E-02
30GO:0000932: P-body3.19E-02
31GO:0005774: vacuolar membrane3.28E-02
32GO:0005788: endoplasmic reticulum lumen3.32E-02
33GO:0019005: SCF ubiquitin ligase complex3.86E-02
34GO:0005643: nuclear pore3.86E-02
35GO:0005618: cell wall4.19E-02
36GO:0009505: plant-type cell wall4.41E-02
37GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.58E-02
38GO:0000139: Golgi membrane4.93E-02
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Gene type



Gene DE type