co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G60360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018293: protein-FAD linkage	0.00E+00
2	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
3	GO:0032780: negative regulation of ATPase activity	0.00E+00
4	GO:0046294: formaldehyde catabolic process	0.00E+00
5	GO:0010336: gibberellic acid homeostasis	0.00E+00
6	GO:0006721: terpenoid metabolic process	0.00E+00
7	GO:0042908: xenobiotic transport	0.00E+00
8	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
9	GO:0006099: tricarboxylic acid cycle	8.44E-07
10	GO:0055114: oxidation-reduction process	4.01E-06
11	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	5.87E-05
12	GO:0015991: ATP hydrolysis coupled proton transport	6.07E-05
13	GO:0050790: regulation of catalytic activity	7.88E-05
14	GO:0005975: carbohydrate metabolic process	8.58E-05
15	GO:0006835: dicarboxylic acid transport	1.46E-04
16	GO:0016487: farnesol metabolic process	1.46E-04
17	GO:0031539: positive regulation of anthocyanin metabolic process	1.46E-04
18	GO:0031468: nuclear envelope reassembly	1.46E-04
19	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	1.46E-04
20	GO:0006148: inosine catabolic process	1.46E-04
21	GO:0080026: response to indolebutyric acid	3.33E-04
22	GO:0043255: regulation of carbohydrate biosynthetic process	3.33E-04
23	GO:0019388: galactose catabolic process	3.33E-04
24	GO:1902000: homogentisate catabolic process	3.33E-04
25	GO:0080183: response to photooxidative stress	3.33E-04
26	GO:0043100: pyrimidine nucleobase salvage	3.33E-04
27	GO:0009072: aromatic amino acid family metabolic process	5.47E-04
28	GO:1901562: response to paraquat	5.47E-04
29	GO:0051603: proteolysis involved in cellular protein catabolic process	6.80E-04
30	GO:1902476: chloride transmembrane transport	7.83E-04
31	GO:0009399: nitrogen fixation	7.83E-04
32	GO:0009963: positive regulation of flavonoid biosynthetic process	7.83E-04
33	GO:0006516: glycoprotein catabolic process	7.83E-04
34	GO:0015700: arsenite transport	7.83E-04
35	GO:0032981: mitochondrial respiratory chain complex I assembly	7.83E-04
36	GO:0009590: detection of gravity	7.83E-04
37	GO:0080024: indolebutyric acid metabolic process	7.83E-04
38	GO:0006572: tyrosine catabolic process	7.83E-04
39	GO:0015743: malate transport	1.04E-03
40	GO:0006221: pyrimidine nucleotide biosynthetic process	1.04E-03
41	GO:0032366: intracellular sterol transport	1.04E-03
42	GO:0015846: polyamine transport	1.04E-03
43	GO:0044205: 'de novo' UMP biosynthetic process	1.04E-03
44	GO:0006542: glutamine biosynthetic process	1.04E-03
45	GO:0006646: phosphatidylethanolamine biosynthetic process	1.04E-03
46	GO:0006555: methionine metabolic process	1.61E-03
47	GO:0042732: D-xylose metabolic process	1.61E-03
48	GO:0007035: vacuolar acidification	1.61E-03
49	GO:0009117: nucleotide metabolic process	1.61E-03
50	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.61E-03
51	GO:0006508: proteolysis	1.89E-03
52	GO:0019509: L-methionine salvage from methylthioadenosine	1.93E-03
53	GO:1901001: negative regulation of response to salt stress	1.93E-03
54	GO:0010189: vitamin E biosynthetic process	1.93E-03
55	GO:0042128: nitrate assimilation	2.02E-03
56	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	2.27E-03
57	GO:0006821: chloride transport	2.27E-03
58	GO:0005978: glycogen biosynthetic process	2.63E-03
59	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.63E-03
60	GO:0030091: protein repair	2.63E-03
61	GO:0007568: aging	2.72E-03
62	GO:0010099: regulation of photomorphogenesis	3.00E-03
63	GO:0015996: chlorophyll catabolic process	3.00E-03
64	GO:0046685: response to arsenic-containing substance	3.40E-03
65	GO:0006098: pentose-phosphate shunt	3.40E-03
66	GO:0009821: alkaloid biosynthetic process	3.40E-03
67	GO:0051453: regulation of intracellular pH	3.81E-03
68	GO:0045036: protein targeting to chloroplast	4.23E-03
69	GO:0009773: photosynthetic electron transport in photosystem I	4.67E-03
70	GO:0048229: gametophyte development	4.67E-03
71	GO:0002213: defense response to insect	5.13E-03
72	GO:0009809: lignin biosynthetic process	5.15E-03
73	GO:0009691: cytokinin biosynthetic process	5.60E-03
74	GO:0006108: malate metabolic process	5.60E-03
75	GO:0006006: glucose metabolic process	5.60E-03
76	GO:0050826: response to freezing	5.60E-03
77	GO:0009225: nucleotide-sugar metabolic process	6.59E-03
78	GO:0007030: Golgi organization	6.59E-03
79	GO:0019853: L-ascorbic acid biosynthetic process	6.59E-03
80	GO:0042753: positive regulation of circadian rhythm	7.10E-03
81	GO:0009651: response to salt stress	7.19E-03
82	GO:0019748: secondary metabolic process	9.30E-03
83	GO:0010017: red or far-red light signaling pathway	9.30E-03
84	GO:0009058: biosynthetic process	9.67E-03
85	GO:0006012: galactose metabolic process	9.89E-03
86	GO:0042391: regulation of membrane potential	1.17E-02
87	GO:0080022: primary root development	1.17E-02
88	GO:0010268: brassinosteroid homeostasis	1.24E-02
89	GO:0009958: positive gravitropism	1.24E-02
90	GO:0006520: cellular amino acid metabolic process	1.24E-02
91	GO:0010150: leaf senescence	1.27E-02
92	GO:0061025: membrane fusion	1.30E-02
93	GO:0006814: sodium ion transport	1.30E-02
94	GO:0019252: starch biosynthetic process	1.37E-02
95	GO:0008654: phospholipid biosynthetic process	1.37E-02
96	GO:0016132: brassinosteroid biosynthetic process	1.43E-02
97	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.43E-02
98	GO:1901657: glycosyl compound metabolic process	1.57E-02
99	GO:0016125: sterol metabolic process	1.64E-02
100	GO:0006464: cellular protein modification process	1.64E-02
101	GO:0009615: response to virus	1.86E-02
102	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.94E-02
103	GO:0010411: xyloglucan metabolic process	2.09E-02
104	GO:0055085: transmembrane transport	2.10E-02
105	GO:0006970: response to osmotic stress	2.12E-02
106	GO:0008219: cell death	2.25E-02
107	GO:0048767: root hair elongation	2.33E-02
108	GO:0009407: toxin catabolic process	2.41E-02
109	GO:0010218: response to far red light	2.41E-02
110	GO:0080167: response to karrikin	2.44E-02
111	GO:0048527: lateral root development	2.49E-02
112	GO:0044550: secondary metabolite biosynthetic process	2.65E-02
113	GO:0009853: photorespiration	2.66E-02
114	GO:0006631: fatty acid metabolic process	3.01E-02
115	GO:0009640: photomorphogenesis	3.19E-02
116	GO:0010114: response to red light	3.19E-02
117	GO:0009636: response to toxic substance	3.47E-02
118	GO:0006855: drug transmembrane transport	3.56E-02
119	GO:0042538: hyperosmotic salinity response	3.75E-02
120	GO:0009585: red, far-red light phototransduction	3.94E-02
121	GO:0010224: response to UV-B	4.04E-02
122	GO:0006857: oligopeptide transport	4.14E-02
123	GO:0009626: plant-type hypersensitive response	4.65E-02
124	GO:0009620: response to fungus	4.75E-02
125	GO:0009740: gibberellic acid mediated signaling pathway	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0050342: tocopherol O-methyltransferase activity	0.00E+00
2	GO:0047918: GDP-mannose 3,5-epimerase activity	0.00E+00
3	GO:0009045: xylose isomerase activity	0.00E+00
4	GO:0015205: nucleobase transmembrane transporter activity	0.00E+00
5	GO:0004334: fumarylacetoacetase activity	0.00E+00
6	GO:0004151: dihydroorotase activity	0.00E+00
7	GO:0017153: sodium:dicarboxylate symporter activity	0.00E+00
8	GO:0047504: (-)-menthol dehydrogenase activity	0.00E+00
9	GO:0033961: cis-stilbene-oxide hydrolase activity	0.00E+00
10	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
11	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
12	GO:0015391: nucleobase:cation symporter activity	0.00E+00
13	GO:0047886: farnesol dehydrogenase activity	0.00E+00
14	GO:0047501: (+)-neomenthol dehydrogenase activity	0.00E+00
15	GO:0042030: ATPase inhibitor activity	0.00E+00
16	GO:0016491: oxidoreductase activity	9.20E-07
17	GO:0004557: alpha-galactosidase activity	3.92E-06
18	GO:0008106: alcohol dehydrogenase (NADP+) activity	9.15E-06
19	GO:0004301: epoxide hydrolase activity	1.71E-05
20	GO:0008234: cysteine-type peptidase activity	7.52E-05
21	GO:0004197: cysteine-type endopeptidase activity	1.04E-04
22	GO:0016784: 3-mercaptopyruvate sulfurtransferase activity	1.46E-04
23	GO:0046480: galactolipid galactosyltransferase activity	1.46E-04
24	GO:0080079: cellobiose glucosidase activity	1.46E-04
25	GO:0004560: alpha-L-fucosidase activity	1.46E-04
26	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	1.46E-04
27	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.46E-04
28	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	1.46E-04
29	GO:0009671: nitrate:proton symporter activity	1.46E-04
30	GO:0045437: uridine nucleosidase activity	1.46E-04
31	GO:0016783: sulfurtransferase activity	1.46E-04
32	GO:0071992: phytochelatin transmembrane transporter activity	1.46E-04
33	GO:0004307: ethanolaminephosphotransferase activity	1.46E-04
34	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	1.46E-04
35	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	1.46E-04
36	GO:0045153: electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity	1.46E-04
37	GO:0046961: proton-transporting ATPase activity, rotational mechanism	2.59E-04
38	GO:0047724: inosine nucleosidase activity	3.33E-04
39	GO:0030572: phosphatidyltransferase activity	3.33E-04
40	GO:0004142: diacylglycerol cholinephosphotransferase activity	3.33E-04
41	GO:0004614: phosphoglucomutase activity	3.33E-04
42	GO:0015179: L-amino acid transmembrane transporter activity	3.33E-04
43	GO:0052692: raffinose alpha-galactosidase activity	5.47E-04
44	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	5.47E-04
45	GO:0010277: chlorophyllide a oxygenase [overall] activity	5.47E-04
46	GO:0015203: polyamine transmembrane transporter activity	7.83E-04
47	GO:0035529: NADH pyrophosphatase activity	7.83E-04
48	GO:0004792: thiosulfate sulfurtransferase activity	7.83E-04
49	GO:0016656: monodehydroascorbate reductase (NADH) activity	7.83E-04
50	GO:0005253: anion channel activity	1.04E-03
51	GO:0016853: isomerase activity	1.11E-03
52	GO:0050662: coenzyme binding	1.11E-03
53	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.31E-03
54	GO:0004356: glutamate-ammonia ligase activity	1.31E-03
55	GO:0051117: ATPase binding	1.61E-03
56	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.61E-03
57	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	1.61E-03
58	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.61E-03
59	GO:0016615: malate dehydrogenase activity	1.61E-03
60	GO:0005247: voltage-gated chloride channel activity	1.61E-03
61	GO:0070300: phosphatidic acid binding	1.93E-03
62	GO:0030060: L-malate dehydrogenase activity	1.93E-03
63	GO:0005261: cation channel activity	1.93E-03
64	GO:0008236: serine-type peptidase activity	2.24E-03
65	GO:0016621: cinnamoyl-CoA reductase activity	2.27E-03
66	GO:0015140: malate transmembrane transporter activity	2.27E-03
67	GO:0004034: aldose 1-epimerase activity	2.63E-03
68	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.63E-03
69	GO:0016787: hydrolase activity	2.98E-03
70	GO:0015078: hydrogen ion transmembrane transporter activity	3.00E-03
71	GO:0003824: catalytic activity	3.12E-03
72	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	3.40E-03
73	GO:0016788: hydrolase activity, acting on ester bonds	3.56E-03
74	GO:0015174: basic amino acid transmembrane transporter activity	3.81E-03
75	GO:0016844: strictosidine synthase activity	3.81E-03
76	GO:0004185: serine-type carboxypeptidase activity	3.83E-03
77	GO:0004129: cytochrome-c oxidase activity	4.67E-03
78	GO:0008559: xenobiotic-transporting ATPase activity	4.67E-03
79	GO:0008378: galactosyltransferase activity	5.13E-03
80	GO:0004022: alcohol dehydrogenase (NAD) activity	5.60E-03
81	GO:0030552: cAMP binding	6.59E-03
82	GO:0030553: cGMP binding	6.59E-03
83	GO:0043130: ubiquitin binding	7.63E-03
84	GO:0005216: ion channel activity	8.18E-03
85	GO:0008324: cation transmembrane transporter activity	8.18E-03
86	GO:0035251: UDP-glucosyltransferase activity	8.73E-03
87	GO:0022891: substrate-specific transmembrane transporter activity	9.89E-03
88	GO:0005506: iron ion binding	1.00E-02
89	GO:0030551: cyclic nucleotide binding	1.17E-02
90	GO:0005249: voltage-gated potassium channel activity	1.17E-02
91	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.43E-02
92	GO:0016413: O-acetyltransferase activity	1.79E-02
93	GO:0020037: heme binding	2.04E-02
94	GO:0050660: flavin adenine dinucleotide binding	2.28E-02
95	GO:0005507: copper ion binding	2.42E-02
96	GO:0019825: oxygen binding	2.42E-02
97	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.66E-02
98	GO:0052689: carboxylic ester hydrolase activity	2.70E-02
99	GO:0008422: beta-glucosidase activity	2.83E-02
100	GO:0042803: protein homodimerization activity	3.06E-02
101	GO:0004364: glutathione transferase activity	3.10E-02
102	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.16E-02
103	GO:0051537: 2 iron, 2 sulfur cluster binding	3.37E-02
104	GO:0015293: symporter activity	3.47E-02
105	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.56E-02
106	GO:0051287: NAD binding	3.65E-02
107	GO:0016298: lipase activity	4.04E-02
108	GO:0003690: double-stranded DNA binding	4.04E-02
109	GO:0045735: nutrient reservoir activity	4.44E-02
110	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.54E-02
111	GO:0022857: transmembrane transporter activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0000221: vacuolar proton-transporting V-type ATPase, V1 domain	0.00E+00
2	GO:0097708: intracellular vesicle	0.00E+00
3	GO:0005773: vacuole	4.56E-13
4	GO:0005764: lysosome	1.85E-07
5	GO:0045273: respiratory chain complex II	1.31E-06
6	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	1.31E-06
7	GO:0005829: cytosol	6.77E-06
8	GO:0005774: vacuolar membrane	5.01E-05
9	GO:0005747: mitochondrial respiratory chain complex I	8.99E-05
10	GO:0048046: apoplast	2.52E-04
11	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.04E-03
12	GO:0009526: plastid envelope	1.04E-03
13	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	1.31E-03
14	GO:0005746: mitochondrial respiratory chain	1.31E-03
15	GO:0034707: chloride channel complex	1.61E-03
16	GO:0010319: stromule	1.62E-03
17	GO:0005759: mitochondrial matrix	1.77E-03
18	GO:0031359: integral component of chloroplast outer membrane	2.27E-03
19	GO:0005615: extracellular space	2.30E-03
20	GO:0009501: amyloplast	2.63E-03
21	GO:0000325: plant-type vacuole	2.72E-03
22	GO:0009507: chloroplast	3.39E-03
23	GO:0010494: cytoplasmic stress granule	3.40E-03
24	GO:0005783: endoplasmic reticulum	4.06E-03
25	GO:0005750: mitochondrial respiratory chain complex III	6.09E-03
26	GO:0005758: mitochondrial intermembrane space	7.63E-03
27	GO:0045271: respiratory chain complex I	8.18E-03
28	GO:0009536: plastid	1.40E-02
29	GO:0005778: peroxisomal membrane	1.72E-02
30	GO:0000932: P-body	1.86E-02
31	GO:0009707: chloroplast outer membrane	2.25E-02
32	GO:0031969: chloroplast membrane	2.44E-02
33	GO:0031966: mitochondrial membrane	3.75E-02
34	GO:0009941: chloroplast envelope	3.79E-02
35	GO:0005887: integral component of plasma membrane	4.86E-02
36	GO:0009505: plant-type cell wall	4.94E-02