Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G59790

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903086: negative regulation of sinapate ester biosynthetic process0.00E+00
2GO:0006862: nucleotide transport0.00E+00
3GO:0080050: regulation of seed development0.00E+00
4GO:0042353: fucose biosynthetic process0.00E+00
5GO:0032497: detection of lipopolysaccharide0.00E+00
6GO:0010046: response to mycotoxin0.00E+00
7GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
8GO:0071289: cellular response to nickel ion0.00E+00
9GO:0010200: response to chitin7.66E-10
10GO:0002679: respiratory burst involved in defense response1.53E-05
11GO:0006952: defense response1.97E-05
12GO:0006468: protein phosphorylation2.24E-05
13GO:0010337: regulation of salicylic acid metabolic process6.73E-05
14GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.24E-04
15GO:0006955: immune response1.24E-04
16GO:0048544: recognition of pollen1.39E-04
17GO:2000070: regulation of response to water deprivation1.59E-04
18GO:0046938: phytochelatin biosynthetic process1.95E-04
19GO:0051180: vitamin transport1.95E-04
20GO:0030974: thiamine pyrophosphate transport1.95E-04
21GO:0090421: embryonic meristem initiation1.95E-04
22GO:0051865: protein autoubiquitination2.40E-04
23GO:0052544: defense response by callose deposition in cell wall3.91E-04
24GO:2000030: regulation of response to red or far red light4.38E-04
25GO:0006898: receptor-mediated endocytosis4.38E-04
26GO:0015893: drug transport4.38E-04
27GO:0052542: defense response by callose deposition4.38E-04
28GO:0042754: negative regulation of circadian rhythm4.38E-04
29GO:0010289: homogalacturonan biosynthetic process4.38E-04
30GO:0070588: calcium ion transmembrane transport6.42E-04
31GO:0007166: cell surface receptor signaling pathway7.00E-04
32GO:0080168: abscisic acid transport7.14E-04
33GO:0042344: indole glucosinolate catabolic process7.14E-04
34GO:0016045: detection of bacterium7.14E-04
35GO:0010359: regulation of anion channel activity7.14E-04
36GO:0010253: UDP-rhamnose biosynthetic process7.14E-04
37GO:0045793: positive regulation of cell size7.14E-04
38GO:0009863: salicylic acid mediated signaling pathway7.89E-04
39GO:0009873: ethylene-activated signaling pathway9.12E-04
40GO:0016310: phosphorylation9.15E-04
41GO:0030100: regulation of endocytosis1.02E-03
42GO:0015700: arsenite transport1.02E-03
43GO:0015696: ammonium transport1.02E-03
44GO:0034219: carbohydrate transmembrane transport1.02E-03
45GO:0010224: response to UV-B1.13E-03
46GO:0072488: ammonium transmembrane transport1.35E-03
47GO:1902347: response to strigolactone1.35E-03
48GO:0009694: jasmonic acid metabolic process1.35E-03
49GO:0009823: cytokinin catabolic process1.72E-03
50GO:2000762: regulation of phenylpropanoid metabolic process1.72E-03
51GO:0006751: glutathione catabolic process2.12E-03
52GO:0010256: endomembrane system organization2.12E-03
53GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.54E-03
54GO:0080113: regulation of seed growth2.54E-03
55GO:0009861: jasmonic acid and ethylene-dependent systemic resistance2.54E-03
56GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway3.00E-03
57GO:0048573: photoperiodism, flowering3.19E-03
58GO:1900150: regulation of defense response to fungus3.47E-03
59GO:0009690: cytokinin metabolic process3.47E-03
60GO:0045010: actin nucleation3.47E-03
61GO:0007155: cell adhesion3.47E-03
62GO:0008219: cell death3.53E-03
63GO:0009880: embryonic pattern specification3.97E-03
64GO:0009699: phenylpropanoid biosynthetic process3.97E-03
65GO:0009932: cell tip growth3.97E-03
66GO:0001708: cell fate specification4.49E-03
67GO:0098656: anion transmembrane transport4.49E-03
68GO:0046685: response to arsenic-containing substance4.49E-03
69GO:2000280: regulation of root development5.04E-03
70GO:0006839: mitochondrial transport5.09E-03
71GO:0019538: protein metabolic process5.61E-03
72GO:0010192: mucilage biosynthetic process5.61E-03
73GO:0010015: root morphogenesis6.20E-03
74GO:0006855: drug transmembrane transport6.71E-03
75GO:0010105: negative regulation of ethylene-activated signaling pathway6.81E-03
76GO:0071365: cellular response to auxin stimulus6.81E-03
77GO:0009611: response to wounding6.81E-03
78GO:0055046: microgametogenesis7.44E-03
79GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.04E-03
80GO:0071732: cellular response to nitric oxide8.77E-03
81GO:0006351: transcription, DNA-templated8.77E-03
82GO:0009969: xyloglucan biosynthetic process8.77E-03
83GO:0009626: plant-type hypersensitive response9.78E-03
84GO:2000377: regulation of reactive oxygen species metabolic process1.02E-02
85GO:0009624: response to nematode1.11E-02
86GO:0016998: cell wall macromolecule catabolic process1.17E-02
87GO:0010017: red or far-red light signaling pathway1.24E-02
88GO:0035428: hexose transmembrane transport1.24E-02
89GO:0030433: ubiquitin-dependent ERAD pathway1.24E-02
90GO:0031348: negative regulation of defense response1.24E-02
91GO:0030245: cellulose catabolic process1.24E-02
92GO:0071215: cellular response to abscisic acid stimulus1.32E-02
93GO:0071369: cellular response to ethylene stimulus1.32E-02
94GO:0016567: protein ubiquitination1.33E-02
95GO:0045492: xylan biosynthetic process1.40E-02
96GO:0019722: calcium-mediated signaling1.40E-02
97GO:0006817: phosphate ion transport1.40E-02
98GO:0010091: trichome branching1.40E-02
99GO:0010089: xylem development1.40E-02
100GO:0010214: seed coat development1.40E-02
101GO:0042631: cellular response to water deprivation1.57E-02
102GO:0009960: endosperm development1.65E-02
103GO:0046323: glucose import1.65E-02
104GO:0009749: response to glucose1.83E-02
105GO:0042742: defense response to bacterium1.91E-02
106GO:0010193: response to ozone1.92E-02
107GO:0007623: circadian rhythm1.92E-02
108GO:0009737: response to abscisic acid2.02E-02
109GO:0071281: cellular response to iron ion2.11E-02
110GO:1901657: glycosyl compound metabolic process2.11E-02
111GO:0006904: vesicle docking involved in exocytosis2.30E-02
112GO:0007267: cell-cell signaling2.30E-02
113GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.60E-02
114GO:0009627: systemic acquired resistance2.70E-02
115GO:0009813: flavonoid biosynthetic process3.12E-02
116GO:0006970: response to osmotic stress3.20E-02
117GO:0010119: regulation of stomatal movement3.34E-02
118GO:0006810: transport3.36E-02
119GO:0045087: innate immune response3.57E-02
120GO:0009637: response to blue light3.57E-02
121GO:0046777: protein autophosphorylation3.93E-02
122GO:0006631: fatty acid metabolic process4.03E-02
123GO:0006887: exocytosis4.03E-02
124GO:0006897: endocytosis4.03E-02
125GO:0009640: photomorphogenesis4.27E-02
126GO:0045892: negative regulation of transcription, DNA-templated4.46E-02
127GO:0008643: carbohydrate transport4.52E-02
RankGO TermAdjusted P value
1GO:0070566: adenylyltransferase activity0.00E+00
2GO:0005522: profilin binding0.00E+00
3GO:0080123: jasmonate-amino synthetase activity0.00E+00
4GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
5GO:0010857: calcium-dependent protein kinase activity0.00E+00
6GO:0015215: nucleotide transmembrane transporter activity0.00E+00
7GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.53E-05
8GO:0016301: kinase activity2.25E-05
9GO:0015085: calcium ion transmembrane transporter activity1.95E-04
10GO:0046870: cadmium ion binding1.95E-04
11GO:0015446: ATPase-coupled arsenite transmembrane transporter activity1.95E-04
12GO:0090440: abscisic acid transporter activity1.95E-04
13GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity1.95E-04
14GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity1.95E-04
15GO:0071992: phytochelatin transmembrane transporter activity1.95E-04
16GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity1.95E-04
17GO:0090422: thiamine pyrophosphate transporter activity1.95E-04
18GO:0050377: UDP-glucose 4,6-dehydratase activity4.38E-04
19GO:0043141: ATP-dependent 5'-3' DNA helicase activity4.38E-04
20GO:0004103: choline kinase activity4.38E-04
21GO:0008460: dTDP-glucose 4,6-dehydratase activity4.38E-04
22GO:0010280: UDP-L-rhamnose synthase activity4.38E-04
23GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.84E-04
24GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.13E-04
25GO:0004674: protein serine/threonine kinase activity6.06E-04
26GO:0043565: sequence-specific DNA binding6.75E-04
27GO:0003840: gamma-glutamyltransferase activity7.14E-04
28GO:0036374: glutathione hydrolase activity7.14E-04
29GO:0005524: ATP binding7.45E-04
30GO:0008514: organic anion transmembrane transporter activity1.22E-03
31GO:0009922: fatty acid elongase activity1.72E-03
32GO:0019139: cytokinin dehydrogenase activity1.72E-03
33GO:0018685: alkane 1-monooxygenase activity1.72E-03
34GO:0045431: flavonol synthase activity1.72E-03
35GO:0008519: ammonium transmembrane transporter activity2.12E-03
36GO:0051020: GTPase binding2.54E-03
37GO:0030246: carbohydrate binding2.68E-03
38GO:0016621: cinnamoyl-CoA reductase activity3.00E-03
39GO:0019899: enzyme binding3.00E-03
40GO:0008143: poly(A) binding3.00E-03
41GO:0004143: diacylglycerol kinase activity3.00E-03
42GO:0005516: calmodulin binding3.26E-03
43GO:0015238: drug transmembrane transporter activity3.71E-03
44GO:0003951: NAD+ kinase activity3.97E-03
45GO:0003678: DNA helicase activity4.49E-03
46GO:0004713: protein tyrosine kinase activity5.61E-03
47GO:0050660: flavin adenine dinucleotide binding7.05E-03
48GO:0005388: calcium-transporting ATPase activity7.44E-03
49GO:0005315: inorganic phosphate transmembrane transporter activity7.44E-03
50GO:0005262: calcium channel activity7.44E-03
51GO:0008131: primary amine oxidase activity8.10E-03
52GO:0031625: ubiquitin protein ligase binding8.59E-03
53GO:0051119: sugar transmembrane transporter activity8.77E-03
54GO:0102336: 3-oxo-arachidoyl-CoA synthase activity9.46E-03
55GO:0102337: 3-oxo-cerotoyl-CoA synthase activity9.46E-03
56GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity9.46E-03
57GO:0004672: protein kinase activity1.07E-02
58GO:0003779: actin binding1.07E-02
59GO:0051087: chaperone binding1.09E-02
60GO:0015144: carbohydrate transmembrane transporter activity1.66E-02
61GO:0005355: glucose transmembrane transporter activity1.74E-02
62GO:0050662: coenzyme binding1.74E-02
63GO:0015297: antiporter activity1.83E-02
64GO:0005351: sugar:proton symporter activity1.87E-02
65GO:0051015: actin filament binding2.11E-02
66GO:0016722: oxidoreductase activity, oxidizing metal ions2.30E-02
67GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.30E-02
68GO:0009931: calcium-dependent protein serine/threonine kinase activity2.70E-02
69GO:0102483: scopolin beta-glucosidase activity2.80E-02
70GO:0030247: polysaccharide binding2.80E-02
71GO:0004683: calmodulin-dependent protein kinase activity2.80E-02
72GO:0008168: methyltransferase activity2.86E-02
73GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.91E-02
74GO:0003700: transcription factor activity, sequence-specific DNA binding2.91E-02
75GO:0008422: beta-glucosidase activity3.80E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.87E-05
2GO:0016021: integral component of membrane2.71E-05
3GO:0005768: endosome6.23E-05
4GO:0005911: cell-cell junction1.95E-04
5GO:0005802: trans-Golgi network9.49E-04
6GO:0030173: integral component of Golgi membrane2.54E-03
7GO:0010494: cytoplasmic stress granule4.49E-03
8GO:0016604: nuclear body5.04E-03
9GO:0031902: late endosome membrane5.31E-03
10GO:0010008: endosome membrane9.47E-03
11GO:0005743: mitochondrial inner membrane1.15E-02
12GO:0030136: clathrin-coated vesicle1.48E-02
13GO:0005770: late endosome1.65E-02
14GO:0000145: exocyst2.01E-02
15GO:0032580: Golgi cisterna membrane2.20E-02
16GO:0005778: peroxisomal membrane2.30E-02
17GO:0046658: anchored component of plasma membrane2.54E-02
18GO:0005794: Golgi apparatus4.18E-02
19GO:0009506: plasmodesma4.46E-02
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Gene type



Gene DE type