GO Enrichment Analysis of Co-expressed Genes with
AT5G59290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033587: shikimate biosynthetic process | 0.00E+00 |
| 2 | GO:0006413: translational initiation | 9.65E-08 |
| 3 | GO:0009423: chorismate biosynthetic process | 4.64E-07 |
| 4 | GO:0009073: aromatic amino acid family biosynthetic process | 2.86E-06 |
| 5 | GO:0019632: shikimate metabolic process | 2.00E-05 |
| 6 | GO:0006085: acetyl-CoA biosynthetic process | 7.90E-05 |
| 7 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.30E-04 |
| 8 | GO:0000054: ribosomal subunit export from nucleus | 1.59E-04 |
| 9 | GO:1900057: positive regulation of leaf senescence | 1.88E-04 |
| 10 | GO:0006098: pentose-phosphate shunt | 2.85E-04 |
| 11 | GO:0006352: DNA-templated transcription, initiation | 3.90E-04 |
| 12 | GO:0006415: translational termination | 3.90E-04 |
| 13 | GO:0006108: malate metabolic process | 4.64E-04 |
| 14 | GO:0000162: tryptophan biosynthetic process | 5.80E-04 |
| 15 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.45E-04 |
| 16 | GO:0009793: embryo development ending in seed dormancy | 8.59E-04 |
| 17 | GO:0010029: regulation of seed germination | 1.45E-03 |
| 18 | GO:0048767: root hair elongation | 1.72E-03 |
| 19 | GO:0006099: tricarboxylic acid cycle | 2.01E-03 |
| 20 | GO:0006839: mitochondrial transport | 2.13E-03 |
| 21 | GO:0009640: photomorphogenesis | 2.31E-03 |
| 22 | GO:0009809: lignin biosynthetic process | 2.82E-03 |
| 23 | GO:0006810: transport | 4.24E-03 |
| 24 | GO:0005975: carbohydrate metabolic process | 4.38E-03 |
| 25 | GO:0006633: fatty acid biosynthetic process | 4.88E-03 |
| 26 | GO:0040008: regulation of growth | 5.04E-03 |
| 27 | GO:0009651: response to salt stress | 9.66E-03 |
| 28 | GO:0009734: auxin-activated signaling pathway | 1.37E-02 |
| 29 | GO:0009908: flower development | 1.50E-02 |
| 30 | GO:0009735: response to cytokinin | 1.51E-02 |
| 31 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.01E-02 |
| 32 | GO:0009733: response to auxin | 2.90E-02 |
| 33 | GO:0009409: response to cold | 3.31E-02 |
| 34 | GO:0046686: response to cadmium ion | 3.66E-02 |
| 35 | GO:0007275: multicellular organism development | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 2 | GO:0003855: 3-dehydroquinate dehydratase activity | 0.00E+00 |
| 3 | GO:0004764: shikimate 3-dehydrogenase (NADP+) activity | 0.00E+00 |
| 4 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 5 | GO:0003743: translation initiation factor activity | 1.61E-07 |
| 6 | GO:0008746: NAD(P)+ transhydrogenase activity | 7.41E-06 |
| 7 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 7.41E-06 |
| 8 | GO:0030371: translation repressor activity | 7.41E-06 |
| 9 | GO:0043024: ribosomal small subunit binding | 2.00E-05 |
| 10 | GO:0003878: ATP citrate synthase activity | 5.65E-05 |
| 11 | GO:0004834: tryptophan synthase activity | 7.90E-05 |
| 12 | GO:0036402: proteasome-activating ATPase activity | 1.30E-04 |
| 13 | GO:0016615: malate dehydrogenase activity | 1.30E-04 |
| 14 | GO:0030060: L-malate dehydrogenase activity | 1.59E-04 |
| 15 | GO:0008135: translation factor activity, RNA binding | 2.52E-04 |
| 16 | GO:0015114: phosphate ion transmembrane transporter activity | 4.64E-04 |
| 17 | GO:0017025: TBP-class protein binding | 5.40E-04 |
| 18 | GO:0010181: FMN binding | 1.01E-03 |
| 19 | GO:0016887: ATPase activity | 1.28E-03 |
| 20 | GO:0050661: NADP binding | 2.13E-03 |
| 21 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.13E-03 |
| 22 | GO:0008026: ATP-dependent helicase activity | 3.73E-03 |
| 23 | GO:0030170: pyridoxal phosphate binding | 4.49E-03 |
| 24 | GO:0042803: protein homodimerization activity | 9.58E-03 |
| 25 | GO:0003924: GTPase activity | 1.07E-02 |
| 26 | GO:0000166: nucleotide binding | 1.61E-02 |
| 27 | GO:0005525: GTP binding | 2.30E-02 |
| 28 | GO:0005524: ATP binding | 2.31E-02 |
| 29 | GO:0005506: iron ion binding | 2.64E-02 |
| 30 | GO:0005215: transporter activity | 2.87E-02 |
| 31 | GO:0003729: mRNA binding | 3.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031597: cytosolic proteasome complex | 4.64E-07 |
| 2 | GO:0005852: eukaryotic translation initiation factor 3 complex | 2.86E-06 |
| 3 | GO:0005829: cytosol | 2.05E-05 |
| 4 | GO:0009346: citrate lyase complex | 5.65E-05 |
| 5 | GO:0005774: vacuolar membrane | 1.77E-04 |
| 6 | GO:0031595: nuclear proteasome complex | 1.88E-04 |
| 7 | GO:0008180: COP9 signalosome | 2.85E-04 |
| 8 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.19E-04 |
| 9 | GO:0009536: plastid | 3.88E-04 |
| 10 | GO:0009570: chloroplast stroma | 4.93E-04 |
| 11 | GO:0009532: plastid stroma | 7.02E-04 |
| 12 | GO:0010319: stromule | 1.30E-03 |
| 13 | GO:0000502: proteasome complex | 2.82E-03 |
| 14 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 7.50E-03 |
| 15 | GO:0005743: mitochondrial inner membrane | 1.02E-02 |
| 16 | GO:0048046: apoplast | 1.05E-02 |
| 17 | GO:0005618: cell wall | 1.14E-02 |
| 18 | GO:0016020: membrane | 1.17E-02 |
| 19 | GO:0009507: chloroplast | 2.51E-02 |
| 20 | GO:0005737: cytoplasm | 2.80E-02 |
| 21 | GO:0009505: plant-type cell wall | 3.13E-02 |
| 22 | GO:0005730: nucleolus | 3.88E-02 |
| 23 | GO:0005739: mitochondrion | 4.88E-02 |