GO Enrichment Analysis of Co-expressed Genes with
AT5G58640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 2 | GO:0007530: sex determination | 0.00E+00 |
| 3 | GO:0006412: translation | 2.85E-68 |
| 4 | GO:0042254: ribosome biogenesis | 9.52E-27 |
| 5 | GO:0000027: ribosomal large subunit assembly | 1.72E-07 |
| 6 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.56E-05 |
| 7 | GO:0009735: response to cytokinin | 2.15E-05 |
| 8 | GO:0051603: proteolysis involved in cellular protein catabolic process | 8.09E-05 |
| 9 | GO:0043248: proteasome assembly | 1.82E-04 |
| 10 | GO:0046686: response to cadmium ion | 3.09E-04 |
| 11 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 3.19E-04 |
| 12 | GO:2001006: regulation of cellulose biosynthetic process | 3.63E-04 |
| 13 | GO:0000413: protein peptidyl-prolyl isomerization | 3.84E-04 |
| 14 | GO:0000028: ribosomal small subunit assembly | 4.01E-04 |
| 15 | GO:0009245: lipid A biosynthetic process | 5.89E-04 |
| 16 | GO:0006432: phenylalanyl-tRNA aminoacylation | 7.89E-04 |
| 17 | GO:0045905: positive regulation of translational termination | 7.89E-04 |
| 18 | GO:0071668: plant-type cell wall assembly | 7.89E-04 |
| 19 | GO:0045901: positive regulation of translational elongation | 7.89E-04 |
| 20 | GO:0006452: translational frameshifting | 7.89E-04 |
| 21 | GO:0051788: response to misfolded protein | 7.89E-04 |
| 22 | GO:0006626: protein targeting to mitochondrion | 1.20E-03 |
| 23 | GO:0002181: cytoplasmic translation | 1.28E-03 |
| 24 | GO:0045793: positive regulation of cell size | 1.28E-03 |
| 25 | GO:1902626: assembly of large subunit precursor of preribosome | 1.28E-03 |
| 26 | GO:0009853: photorespiration | 1.67E-03 |
| 27 | GO:0006168: adenine salvage | 1.84E-03 |
| 28 | GO:0032877: positive regulation of DNA endoreduplication | 1.84E-03 |
| 29 | GO:0006166: purine ribonucleoside salvage | 1.84E-03 |
| 30 | GO:0070301: cellular response to hydrogen peroxide | 1.84E-03 |
| 31 | GO:0006107: oxaloacetate metabolic process | 1.84E-03 |
| 32 | GO:0006241: CTP biosynthetic process | 1.84E-03 |
| 33 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.84E-03 |
| 34 | GO:0006165: nucleoside diphosphate phosphorylation | 1.84E-03 |
| 35 | GO:0006228: UTP biosynthetic process | 1.84E-03 |
| 36 | GO:0009647: skotomorphogenesis | 1.84E-03 |
| 37 | GO:0006487: protein N-linked glycosylation | 1.87E-03 |
| 38 | GO:0015992: proton transport | 2.27E-03 |
| 39 | GO:0061077: chaperone-mediated protein folding | 2.27E-03 |
| 40 | GO:0051781: positive regulation of cell division | 2.47E-03 |
| 41 | GO:0006183: GTP biosynthetic process | 2.47E-03 |
| 42 | GO:0010363: regulation of plant-type hypersensitive response | 2.47E-03 |
| 43 | GO:0032366: intracellular sterol transport | 2.47E-03 |
| 44 | GO:0009651: response to salt stress | 2.68E-03 |
| 45 | GO:0044209: AMP salvage | 3.16E-03 |
| 46 | GO:0015991: ATP hydrolysis coupled proton transport | 3.46E-03 |
| 47 | GO:0045040: protein import into mitochondrial outer membrane | 3.91E-03 |
| 48 | GO:0009955: adaxial/abaxial pattern specification | 4.71E-03 |
| 49 | GO:1901001: negative regulation of response to salt stress | 4.71E-03 |
| 50 | GO:0032880: regulation of protein localization | 5.56E-03 |
| 51 | GO:0048528: post-embryonic root development | 5.56E-03 |
| 52 | GO:1900056: negative regulation of leaf senescence | 5.56E-03 |
| 53 | GO:0000398: mRNA splicing, via spliceosome | 6.34E-03 |
| 54 | GO:0009690: cytokinin metabolic process | 6.46E-03 |
| 55 | GO:0031540: regulation of anthocyanin biosynthetic process | 6.46E-03 |
| 56 | GO:0009231: riboflavin biosynthetic process | 6.46E-03 |
| 57 | GO:0009808: lignin metabolic process | 7.41E-03 |
| 58 | GO:0022900: electron transport chain | 7.41E-03 |
| 59 | GO:0048589: developmental growth | 8.41E-03 |
| 60 | GO:0098656: anion transmembrane transport | 8.41E-03 |
| 61 | GO:0000387: spliceosomal snRNP assembly | 9.46E-03 |
| 62 | GO:0006413: translational initiation | 9.71E-03 |
| 63 | GO:0043069: negative regulation of programmed cell death | 1.05E-02 |
| 64 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.23E-02 |
| 65 | GO:0016925: protein sumoylation | 1.29E-02 |
| 66 | GO:0008361: regulation of cell size | 1.29E-02 |
| 67 | GO:0006820: anion transport | 1.29E-02 |
| 68 | GO:0010628: positive regulation of gene expression | 1.41E-02 |
| 69 | GO:0006108: malate metabolic process | 1.41E-02 |
| 70 | GO:0010102: lateral root morphogenesis | 1.41E-02 |
| 71 | GO:0006807: nitrogen compound metabolic process | 1.41E-02 |
| 72 | GO:0006446: regulation of translational initiation | 1.53E-02 |
| 73 | GO:0009644: response to high light intensity | 1.55E-02 |
| 74 | GO:0006071: glycerol metabolic process | 1.80E-02 |
| 75 | GO:0006406: mRNA export from nucleus | 1.93E-02 |
| 76 | GO:0006289: nucleotide-excision repair | 1.93E-02 |
| 77 | GO:0009116: nucleoside metabolic process | 1.93E-02 |
| 78 | GO:0030150: protein import into mitochondrial matrix | 1.93E-02 |
| 79 | GO:0007005: mitochondrion organization | 2.37E-02 |
| 80 | GO:0010089: xylem development | 2.67E-02 |
| 81 | GO:0045454: cell redox homeostasis | 3.04E-02 |
| 82 | GO:0006662: glycerol ether metabolic process | 3.16E-02 |
| 83 | GO:0015986: ATP synthesis coupled proton transport | 3.32E-02 |
| 84 | GO:0048825: cotyledon development | 3.49E-02 |
| 85 | GO:0010183: pollen tube guidance | 3.49E-02 |
| 86 | GO:0000302: response to reactive oxygen species | 3.67E-02 |
| 87 | GO:0080156: mitochondrial mRNA modification | 3.67E-02 |
| 88 | GO:0010193: response to ozone | 3.67E-02 |
| 89 | GO:0006457: protein folding | 3.76E-02 |
| 90 | GO:0009630: gravitropism | 3.84E-02 |
| 91 | GO:0030163: protein catabolic process | 4.02E-02 |
| 92 | GO:0006633: fatty acid biosynthetic process | 4.31E-02 |
| 93 | GO:0009409: response to cold | 4.32E-02 |
| 94 | GO:0010286: heat acclimation | 4.39E-02 |
| 95 | GO:0000910: cytokinesis | 4.57E-02 |
| 96 | GO:0006414: translational elongation | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050152: omega-amidase activity | 0.00E+00 |
| 2 | GO:0004746: riboflavin synthase activity | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 4.93E-83 |
| 4 | GO:0003729: mRNA binding | 5.18E-18 |
| 5 | GO:0004298: threonine-type endopeptidase activity | 1.21E-12 |
| 6 | GO:0008233: peptidase activity | 4.83E-08 |
| 7 | GO:0019843: rRNA binding | 2.63E-06 |
| 8 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.99E-06 |
| 9 | GO:0004576: oligosaccharyl transferase activity | 8.11E-05 |
| 10 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.27E-04 |
| 11 | GO:0031177: phosphopantetheine binding | 1.82E-04 |
| 12 | GO:0000035: acyl binding | 2.46E-04 |
| 13 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 3.19E-04 |
| 14 | GO:0035614: snRNA stem-loop binding | 3.63E-04 |
| 15 | GO:0043022: ribosome binding | 4.01E-04 |
| 16 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 4.01E-04 |
| 17 | GO:0030619: U1 snRNA binding | 7.89E-04 |
| 18 | GO:0004826: phenylalanine-tRNA ligase activity | 7.89E-04 |
| 19 | GO:0004089: carbonate dehydratase activity | 1.20E-03 |
| 20 | GO:0008430: selenium binding | 1.28E-03 |
| 21 | GO:0050897: cobalt ion binding | 1.48E-03 |
| 22 | GO:0004550: nucleoside diphosphate kinase activity | 1.84E-03 |
| 23 | GO:0008097: 5S rRNA binding | 1.84E-03 |
| 24 | GO:0003999: adenine phosphoribosyltransferase activity | 1.84E-03 |
| 25 | GO:0005528: FK506 binding | 1.87E-03 |
| 26 | GO:0010011: auxin binding | 2.47E-03 |
| 27 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.47E-03 |
| 28 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 2.47E-03 |
| 29 | GO:0070628: proteasome binding | 2.47E-03 |
| 30 | GO:0031386: protein tag | 3.16E-03 |
| 31 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 3.72E-03 |
| 32 | GO:0031593: polyubiquitin binding | 3.91E-03 |
| 33 | GO:0051920: peroxiredoxin activity | 4.71E-03 |
| 34 | GO:0003723: RNA binding | 5.41E-03 |
| 35 | GO:0042162: telomeric DNA binding | 5.56E-03 |
| 36 | GO:0015288: porin activity | 6.46E-03 |
| 37 | GO:0016209: antioxidant activity | 6.46E-03 |
| 38 | GO:0008308: voltage-gated anion channel activity | 7.41E-03 |
| 39 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 8.41E-03 |
| 40 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.69E-03 |
| 41 | GO:0001055: RNA polymerase II activity | 9.46E-03 |
| 42 | GO:0003746: translation elongation factor activity | 1.10E-02 |
| 43 | GO:0003697: single-stranded DNA binding | 1.10E-02 |
| 44 | GO:0003993: acid phosphatase activity | 1.16E-02 |
| 45 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 1.17E-02 |
| 46 | GO:0001054: RNA polymerase I activity | 1.17E-02 |
| 47 | GO:0044183: protein binding involved in protein folding | 1.17E-02 |
| 48 | GO:0004129: cytochrome-c oxidase activity | 1.17E-02 |
| 49 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.17E-02 |
| 50 | GO:0001056: RNA polymerase III activity | 1.29E-02 |
| 51 | GO:0000049: tRNA binding | 1.29E-02 |
| 52 | GO:0003743: translation initiation factor activity | 1.30E-02 |
| 53 | GO:0015266: protein channel activity | 1.41E-02 |
| 54 | GO:0051536: iron-sulfur cluster binding | 1.93E-02 |
| 55 | GO:0043130: ubiquitin binding | 1.93E-02 |
| 56 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.93E-02 |
| 57 | GO:0047134: protein-disulfide reductase activity | 2.83E-02 |
| 58 | GO:0015035: protein disulfide oxidoreductase activity | 2.83E-02 |
| 59 | GO:0004791: thioredoxin-disulfide reductase activity | 3.32E-02 |
| 60 | GO:0004872: receptor activity | 3.49E-02 |
| 61 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 3.67E-02 |
| 62 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 4.02E-02 |
| 63 | GO:0003684: damaged DNA binding | 4.20E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016469: proton-transporting two-sector ATPase complex | 0.00E+00 |
| 2 | GO:0005840: ribosome | 5.37E-65 |
| 3 | GO:0022626: cytosolic ribosome | 3.17E-55 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 5.03E-51 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 3.47E-36 |
| 6 | GO:0005829: cytosol | 4.22E-23 |
| 7 | GO:0005737: cytoplasm | 4.54E-19 |
| 8 | GO:0005730: nucleolus | 2.23E-17 |
| 9 | GO:0005774: vacuolar membrane | 6.99E-15 |
| 10 | GO:0000502: proteasome complex | 1.85E-14 |
| 11 | GO:0005839: proteasome core complex | 1.21E-12 |
| 12 | GO:0015934: large ribosomal subunit | 2.87E-11 |
| 13 | GO:0005773: vacuole | 2.63E-10 |
| 14 | GO:0009506: plasmodesma | 4.31E-10 |
| 15 | GO:0005750: mitochondrial respiratory chain complex III | 3.42E-06 |
| 16 | GO:0016020: membrane | 3.97E-06 |
| 17 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 4.45E-06 |
| 18 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.82E-05 |
| 19 | GO:0005618: cell wall | 2.08E-05 |
| 20 | GO:0008250: oligosaccharyltransferase complex | 1.27E-04 |
| 21 | GO:0045271: respiratory chain complex I | 1.89E-04 |
| 22 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.89E-04 |
| 23 | GO:0015935: small ribosomal subunit | 2.17E-04 |
| 24 | GO:0005747: mitochondrial respiratory chain complex I | 7.73E-04 |
| 25 | GO:0035145: exon-exon junction complex | 7.89E-04 |
| 26 | GO:0005697: telomerase holoenzyme complex | 7.89E-04 |
| 27 | GO:0008541: proteasome regulatory particle, lid subcomplex | 9.32E-04 |
| 28 | GO:0005788: endoplasmic reticulum lumen | 9.51E-04 |
| 29 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.06E-03 |
| 30 | GO:0009507: chloroplast | 1.24E-03 |
| 31 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.28E-03 |
| 32 | GO:0000419: DNA-directed RNA polymerase V complex | 1.69E-03 |
| 33 | GO:0033180: proton-transporting V-type ATPase, V1 domain | 1.84E-03 |
| 34 | GO:1990726: Lsm1-7-Pat1 complex | 1.84E-03 |
| 35 | GO:0070469: respiratory chain | 2.07E-03 |
| 36 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 2.47E-03 |
| 37 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 2.47E-03 |
| 38 | GO:0031966: mitochondrial membrane | 3.08E-03 |
| 39 | GO:0005746: mitochondrial respiratory chain | 3.16E-03 |
| 40 | GO:0016272: prefoldin complex | 4.71E-03 |
| 41 | GO:0045273: respiratory chain complex II | 6.46E-03 |
| 42 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 6.46E-03 |
| 43 | GO:0005688: U6 snRNP | 6.46E-03 |
| 44 | GO:0046930: pore complex | 7.41E-03 |
| 45 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 7.41E-03 |
| 46 | GO:0005742: mitochondrial outer membrane translocase complex | 7.41E-03 |
| 47 | GO:0005736: DNA-directed RNA polymerase I complex | 8.41E-03 |
| 48 | GO:0005685: U1 snRNP | 8.41E-03 |
| 49 | GO:0005759: mitochondrial matrix | 9.42E-03 |
| 50 | GO:0005666: DNA-directed RNA polymerase III complex | 9.46E-03 |
| 51 | GO:0071011: precatalytic spliceosome | 9.46E-03 |
| 52 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.05E-02 |
| 53 | GO:0071013: catalytic step 2 spliceosome | 1.17E-02 |
| 54 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.17E-02 |
| 55 | GO:0031307: integral component of mitochondrial outer membrane | 1.29E-02 |
| 56 | GO:0009508: plastid chromosome | 1.41E-02 |
| 57 | GO:0019013: viral nucleocapsid | 1.41E-02 |
| 58 | GO:0005886: plasma membrane | 1.83E-02 |
| 59 | GO:0005758: mitochondrial intermembrane space | 1.93E-02 |
| 60 | GO:0005741: mitochondrial outer membrane | 2.22E-02 |
| 61 | GO:0005681: spliceosomal complex | 2.28E-02 |
| 62 | GO:0009536: plastid | 3.68E-02 |
| 63 | GO:0005739: mitochondrion | 3.81E-02 |
| 64 | GO:0005783: endoplasmic reticulum | 3.97E-02 |
| 65 | GO:0009295: nucleoid | 4.39E-02 |
| 66 | GO:0000932: P-body | 4.76E-02 |