GO Enrichment Analysis of Co-expressed Genes with
AT5G58480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042493: response to drug | 0.00E+00 |
| 2 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 4 | GO:0009451: RNA modification | 1.00E-05 |
| 5 | GO:0010480: microsporocyte differentiation | 1.02E-04 |
| 6 | GO:0042371: vitamin K biosynthetic process | 1.02E-04 |
| 7 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.40E-04 |
| 8 | GO:0001578: microtubule bundle formation | 3.99E-04 |
| 9 | GO:0090391: granum assembly | 3.99E-04 |
| 10 | GO:0009102: biotin biosynthetic process | 5.73E-04 |
| 11 | GO:0009650: UV protection | 5.73E-04 |
| 12 | GO:0071483: cellular response to blue light | 7.62E-04 |
| 13 | GO:0051322: anaphase | 7.62E-04 |
| 14 | GO:0007020: microtubule nucleation | 7.62E-04 |
| 15 | GO:0016123: xanthophyll biosynthetic process | 9.62E-04 |
| 16 | GO:0009616: virus induced gene silencing | 9.62E-04 |
| 17 | GO:0046785: microtubule polymerization | 9.62E-04 |
| 18 | GO:0016558: protein import into peroxisome matrix | 9.62E-04 |
| 19 | GO:0035194: posttranscriptional gene silencing by RNA | 1.17E-03 |
| 20 | GO:0010190: cytochrome b6f complex assembly | 1.17E-03 |
| 21 | GO:1901259: chloroplast rRNA processing | 1.40E-03 |
| 22 | GO:0017148: negative regulation of translation | 1.40E-03 |
| 23 | GO:0048528: post-embryonic root development | 1.65E-03 |
| 24 | GO:0048437: floral organ development | 1.65E-03 |
| 25 | GO:0048564: photosystem I assembly | 1.90E-03 |
| 26 | GO:0042255: ribosome assembly | 1.90E-03 |
| 27 | GO:0006353: DNA-templated transcription, termination | 1.90E-03 |
| 28 | GO:0071482: cellular response to light stimulus | 2.17E-03 |
| 29 | GO:0000373: Group II intron splicing | 2.45E-03 |
| 30 | GO:0015979: photosynthesis | 2.92E-03 |
| 31 | GO:0006949: syncytium formation | 3.05E-03 |
| 32 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 3.05E-03 |
| 33 | GO:0006352: DNA-templated transcription, initiation | 3.36E-03 |
| 34 | GO:0048229: gametophyte development | 3.36E-03 |
| 35 | GO:0009773: photosynthetic electron transport in photosystem I | 3.36E-03 |
| 36 | GO:0010628: positive regulation of gene expression | 4.02E-03 |
| 37 | GO:0010075: regulation of meristem growth | 4.02E-03 |
| 38 | GO:0009725: response to hormone | 4.02E-03 |
| 39 | GO:0009934: regulation of meristem structural organization | 4.37E-03 |
| 40 | GO:0090351: seedling development | 4.72E-03 |
| 41 | GO:0009793: embryo development ending in seed dormancy | 4.89E-03 |
| 42 | GO:0006863: purine nucleobase transport | 5.09E-03 |
| 43 | GO:0080147: root hair cell development | 5.46E-03 |
| 44 | GO:0043622: cortical microtubule organization | 5.85E-03 |
| 45 | GO:0007017: microtubule-based process | 5.85E-03 |
| 46 | GO:0080092: regulation of pollen tube growth | 6.64E-03 |
| 47 | GO:0009411: response to UV | 7.06E-03 |
| 48 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 7.06E-03 |
| 49 | GO:0008033: tRNA processing | 8.35E-03 |
| 50 | GO:0000413: protein peptidyl-prolyl isomerization | 8.35E-03 |
| 51 | GO:0048653: anther development | 8.35E-03 |
| 52 | GO:0048868: pollen tube development | 8.80E-03 |
| 53 | GO:0007166: cell surface receptor signaling pathway | 8.93E-03 |
| 54 | GO:0007018: microtubule-based movement | 9.26E-03 |
| 55 | GO:0006814: sodium ion transport | 9.26E-03 |
| 56 | GO:0006635: fatty acid beta-oxidation | 1.02E-02 |
| 57 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.02E-02 |
| 58 | GO:0071554: cell wall organization or biogenesis | 1.02E-02 |
| 59 | GO:0010193: response to ozone | 1.02E-02 |
| 60 | GO:0032502: developmental process | 1.07E-02 |
| 61 | GO:0016032: viral process | 1.07E-02 |
| 62 | GO:0009828: plant-type cell wall loosening | 1.17E-02 |
| 63 | GO:0009658: chloroplast organization | 1.21E-02 |
| 64 | GO:0000910: cytokinesis | 1.27E-02 |
| 65 | GO:0015995: chlorophyll biosynthetic process | 1.48E-02 |
| 66 | GO:0010411: xyloglucan metabolic process | 1.48E-02 |
| 67 | GO:0080167: response to karrikin | 1.50E-02 |
| 68 | GO:0055114: oxidation-reduction process | 1.70E-02 |
| 69 | GO:0009744: response to sucrose | 2.26E-02 |
| 70 | GO:0008283: cell proliferation | 2.26E-02 |
| 71 | GO:0042546: cell wall biogenesis | 2.33E-02 |
| 72 | GO:0009664: plant-type cell wall organization | 2.66E-02 |
| 73 | GO:0010224: response to UV-B | 2.86E-02 |
| 74 | GO:0006810: transport | 3.31E-02 |
| 75 | GO:0009553: embryo sac development | 3.52E-02 |
| 76 | GO:0009742: brassinosteroid mediated signaling pathway | 3.75E-02 |
| 77 | GO:0042744: hydrogen peroxide catabolic process | 4.62E-02 |
| 78 | GO:0009790: embryo development | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 2 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 3 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 4 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
| 5 | GO:0004519: endonuclease activity | 1.23E-04 |
| 6 | GO:0003723: RNA binding | 1.49E-04 |
| 7 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.56E-04 |
| 8 | GO:0016630: protochlorophyllide reductase activity | 2.40E-04 |
| 9 | GO:0043023: ribosomal large subunit binding | 5.73E-04 |
| 10 | GO:0008508: bile acid:sodium symporter activity | 5.73E-04 |
| 11 | GO:0019843: rRNA binding | 7.34E-04 |
| 12 | GO:0001053: plastid sigma factor activity | 7.62E-04 |
| 13 | GO:0016987: sigma factor activity | 7.62E-04 |
| 14 | GO:0003959: NADPH dehydrogenase activity | 9.62E-04 |
| 15 | GO:0042578: phosphoric ester hydrolase activity | 1.17E-03 |
| 16 | GO:0008195: phosphatidate phosphatase activity | 1.40E-03 |
| 17 | GO:0003724: RNA helicase activity | 2.17E-03 |
| 18 | GO:0003690: double-stranded DNA binding | 3.30E-03 |
| 19 | GO:0008081: phosphoric diester hydrolase activity | 4.02E-03 |
| 20 | GO:0008131: primary amine oxidase activity | 4.37E-03 |
| 21 | GO:0008146: sulfotransferase activity | 4.72E-03 |
| 22 | GO:0043424: protein histidine kinase binding | 5.85E-03 |
| 23 | GO:0005345: purine nucleobase transmembrane transporter activity | 5.85E-03 |
| 24 | GO:0033612: receptor serine/threonine kinase binding | 6.24E-03 |
| 25 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 7.28E-03 |
| 26 | GO:0016491: oxidoreductase activity | 7.45E-03 |
| 27 | GO:0003727: single-stranded RNA binding | 7.48E-03 |
| 28 | GO:0008017: microtubule binding | 8.17E-03 |
| 29 | GO:0004872: receptor activity | 9.73E-03 |
| 30 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.02E-02 |
| 31 | GO:0016413: O-acetyltransferase activity | 1.27E-02 |
| 32 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.48E-02 |
| 33 | GO:0003993: acid phosphatase activity | 1.95E-02 |
| 34 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.07E-02 |
| 35 | GO:0005215: transporter activity | 2.33E-02 |
| 36 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.39E-02 |
| 37 | GO:0043621: protein self-association | 2.39E-02 |
| 38 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.52E-02 |
| 39 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.80E-02 |
| 40 | GO:0003777: microtubule motor activity | 3.01E-02 |
| 41 | GO:0022857: transmembrane transporter activity | 3.44E-02 |
| 42 | GO:0016887: ATPase activity | 3.44E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.16E-12 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.04E-07 |
| 3 | GO:0009543: chloroplast thylakoid lumen | 4.19E-06 |
| 4 | GO:0009579: thylakoid | 7.03E-05 |
| 5 | GO:0031977: thylakoid lumen | 2.12E-04 |
| 6 | GO:0030095: chloroplast photosystem II | 2.37E-04 |
| 7 | GO:0009654: photosystem II oxygen evolving complex | 3.67E-04 |
| 8 | GO:0042646: plastid nucleoid | 5.73E-04 |
| 9 | GO:0019898: extrinsic component of membrane | 7.51E-04 |
| 10 | GO:0030286: dynein complex | 7.62E-04 |
| 11 | GO:0072686: mitotic spindle | 9.62E-04 |
| 12 | GO:0010005: cortical microtubule, transverse to long axis | 1.40E-03 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 1.65E-03 |
| 14 | GO:0009538: photosystem I reaction center | 1.90E-03 |
| 15 | GO:0042644: chloroplast nucleoid | 2.45E-03 |
| 16 | GO:0055028: cortical microtubule | 3.05E-03 |
| 17 | GO:0016324: apical plasma membrane | 3.05E-03 |
| 18 | GO:0009574: preprophase band | 4.02E-03 |
| 19 | GO:0005938: cell cortex | 4.02E-03 |
| 20 | GO:0043231: intracellular membrane-bounded organelle | 4.58E-03 |
| 21 | GO:0042651: thylakoid membrane | 5.85E-03 |
| 22 | GO:0009505: plant-type cell wall | 6.91E-03 |
| 23 | GO:0005871: kinesin complex | 7.91E-03 |
| 24 | GO:0009570: chloroplast stroma | 1.02E-02 |
| 25 | GO:0009534: chloroplast thylakoid | 1.07E-02 |
| 26 | GO:0005778: peroxisomal membrane | 1.22E-02 |
| 27 | GO:0016020: membrane | 1.44E-02 |
| 28 | GO:0005874: microtubule | 1.45E-02 |
| 29 | GO:0009941: chloroplast envelope | 1.67E-02 |
| 30 | GO:0015934: large ribosomal subunit | 1.77E-02 |
| 31 | GO:0005819: spindle | 2.01E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 3.59E-02 |
| 33 | GO:0010287: plastoglobule | 4.06E-02 |
| 34 | GO:0009524: phragmoplast | 4.38E-02 |