GO Enrichment Analysis of Co-expressed Genes with
AT5G58290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006858: extracellular transport | 0.00E+00 |
| 2 | GO:0006511: ubiquitin-dependent protein catabolic process | 5.05E-19 |
| 3 | GO:0030163: protein catabolic process | 1.13E-10 |
| 4 | GO:0030433: ubiquitin-dependent ERAD pathway | 5.72E-07 |
| 5 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.99E-06 |
| 6 | GO:0042176: regulation of protein catabolic process | 1.99E-06 |
| 7 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.50E-06 |
| 8 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 2.30E-05 |
| 9 | GO:0006144: purine nucleobase metabolic process | 2.30E-05 |
| 10 | GO:0006434: seryl-tRNA aminoacylation | 2.30E-05 |
| 11 | GO:0019628: urate catabolic process | 2.30E-05 |
| 12 | GO:0001676: long-chain fatty acid metabolic process | 1.55E-04 |
| 13 | GO:0033320: UDP-D-xylose biosynthetic process | 2.12E-04 |
| 14 | GO:0042732: D-xylose metabolic process | 3.37E-04 |
| 15 | GO:0000209: protein polyubiquitination | 3.85E-04 |
| 16 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 4.47E-04 |
| 17 | GO:0000338: protein deneddylation | 4.74E-04 |
| 18 | GO:0051603: proteolysis involved in cellular protein catabolic process | 5.12E-04 |
| 19 | GO:0030968: endoplasmic reticulum unfolded protein response | 6.21E-04 |
| 20 | GO:0043067: regulation of programmed cell death | 7.77E-04 |
| 21 | GO:0010102: lateral root morphogenesis | 1.12E-03 |
| 22 | GO:0009225: nucleotide-sugar metabolic process | 1.30E-03 |
| 23 | GO:0007031: peroxisome organization | 1.30E-03 |
| 24 | GO:0034976: response to endoplasmic reticulum stress | 1.39E-03 |
| 25 | GO:0015992: proton transport | 1.70E-03 |
| 26 | GO:0015991: ATP hydrolysis coupled proton transport | 2.24E-03 |
| 27 | GO:0045454: cell redox homeostasis | 2.62E-03 |
| 28 | GO:0010193: response to ozone | 2.72E-03 |
| 29 | GO:0046686: response to cadmium ion | 3.04E-03 |
| 30 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 3.62E-03 |
| 31 | GO:0007275: multicellular organism development | 4.08E-03 |
| 32 | GO:0010043: response to zinc ion | 4.60E-03 |
| 33 | GO:0045087: innate immune response | 4.90E-03 |
| 34 | GO:0006897: endocytosis | 5.52E-03 |
| 35 | GO:0006631: fatty acid metabolic process | 5.52E-03 |
| 36 | GO:0009640: photomorphogenesis | 5.84E-03 |
| 37 | GO:0009965: leaf morphogenesis | 6.33E-03 |
| 38 | GO:0009585: red, far-red light phototransduction | 7.18E-03 |
| 39 | GO:0009651: response to salt stress | 8.03E-03 |
| 40 | GO:0006096: glycolytic process | 8.06E-03 |
| 41 | GO:0048316: seed development | 8.24E-03 |
| 42 | GO:0009790: embryo development | 1.20E-02 |
| 43 | GO:0015031: protein transport | 1.46E-02 |
| 44 | GO:0007049: cell cycle | 1.99E-02 |
| 45 | GO:0045892: negative regulation of transcription, DNA-templated | 2.46E-02 |
| 46 | GO:0009793: embryo development ending in seed dormancy | 2.67E-02 |
| 47 | GO:0009735: response to cytokinin | 3.99E-02 |
| 48 | GO:0009738: abscisic acid-activated signaling pathway | 4.15E-02 |
| 49 | GO:0051301: cell division | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0055105: ubiquitin-protein transferase inhibitor activity | 0.00E+00 |
| 2 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 3 | GO:0004298: threonine-type endopeptidase activity | 4.83E-07 |
| 4 | GO:0036402: proteasome-activating ATPase activity | 1.99E-06 |
| 5 | GO:0030234: enzyme regulator activity | 1.39E-05 |
| 6 | GO:0004828: serine-tRNA ligase activity | 2.30E-05 |
| 7 | GO:1990381: ubiquitin-specific protease binding | 2.30E-05 |
| 8 | GO:0017025: TBP-class protein binding | 3.12E-05 |
| 9 | GO:0016887: ATPase activity | 5.60E-05 |
| 10 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.04E-04 |
| 11 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 2.12E-04 |
| 12 | GO:0004523: RNA-DNA hybrid ribonuclease activity | 2.73E-04 |
| 13 | GO:0048040: UDP-glucuronate decarboxylase activity | 3.37E-04 |
| 14 | GO:0070403: NAD+ binding | 4.04E-04 |
| 15 | GO:0102391: decanoate--CoA ligase activity | 4.04E-04 |
| 16 | GO:0004467: long-chain fatty acid-CoA ligase activity | 4.74E-04 |
| 17 | GO:0015078: hydrogen ion transmembrane transporter activity | 6.21E-04 |
| 18 | GO:0030955: potassium ion binding | 7.77E-04 |
| 19 | GO:0004743: pyruvate kinase activity | 7.77E-04 |
| 20 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 9.42E-04 |
| 21 | GO:0004175: endopeptidase activity | 1.20E-03 |
| 22 | GO:0003714: transcription corepressor activity | 1.49E-03 |
| 23 | GO:0003756: protein disulfide isomerase activity | 2.02E-03 |
| 24 | GO:0008233: peptidase activity | 2.16E-03 |
| 25 | GO:0005524: ATP binding | 3.61E-03 |
| 26 | GO:0050897: cobalt ion binding | 4.60E-03 |
| 27 | GO:0005515: protein binding | 7.14E-03 |
| 28 | GO:0051082: unfolded protein binding | 9.17E-03 |
| 29 | GO:0008026: ATP-dependent helicase activity | 9.56E-03 |
| 30 | GO:0003743: translation initiation factor activity | 1.50E-02 |
| 31 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.60E-02 |
| 32 | GO:0000287: magnesium ion binding | 1.81E-02 |
| 33 | GO:0050660: flavin adenine dinucleotide binding | 2.04E-02 |
| 34 | GO:0061630: ubiquitin protein ligase activity | 2.22E-02 |
| 35 | GO:0008270: zinc ion binding | 3.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 2 | GO:0000502: proteasome complex | 2.63E-27 |
| 3 | GO:0008541: proteasome regulatory particle, lid subcomplex | 9.61E-16 |
| 4 | GO:0005829: cytosol | 3.04E-11 |
| 5 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.23E-10 |
| 6 | GO:0031595: nuclear proteasome complex | 1.04E-08 |
| 7 | GO:0005838: proteasome regulatory particle | 1.55E-07 |
| 8 | GO:0005839: proteasome core complex | 4.83E-07 |
| 9 | GO:0031597: cytosolic proteasome complex | 2.93E-06 |
| 10 | GO:0000836: Hrd1p ubiquitin ligase complex | 2.30E-05 |
| 11 | GO:0044322: endoplasmic reticulum quality control compartment | 2.30E-05 |
| 12 | GO:0036513: Derlin-1 retrotranslocation complex | 1.55E-04 |
| 13 | GO:0005737: cytoplasm | 1.77E-04 |
| 14 | GO:0033179: proton-transporting V-type ATPase, V0 domain | 2.12E-04 |
| 15 | GO:0000813: ESCRT I complex | 2.73E-04 |
| 16 | GO:0000326: protein storage vacuole | 6.21E-04 |
| 17 | GO:0019773: proteasome core complex, alpha-subunit complex | 6.21E-04 |
| 18 | GO:0008180: COP9 signalosome | 6.98E-04 |
| 19 | GO:0016592: mediator complex | 2.84E-03 |
| 20 | GO:0005788: endoplasmic reticulum lumen | 3.62E-03 |
| 21 | GO:0005856: cytoskeleton | 6.33E-03 |
| 22 | GO:0005777: peroxisome | 6.51E-03 |
| 23 | GO:0005747: mitochondrial respiratory chain complex I | 8.24E-03 |
| 24 | GO:0005634: nucleus | 1.09E-02 |
| 25 | GO:0009524: phragmoplast | 1.11E-02 |
| 26 | GO:0009506: plasmodesma | 1.25E-02 |
| 27 | GO:0005759: mitochondrial matrix | 1.26E-02 |
| 28 | GO:0009505: plant-type cell wall | 1.44E-02 |
| 29 | GO:0005774: vacuolar membrane | 3.99E-02 |
| 30 | GO:0022626: cytosolic ribosome | 4.12E-02 |
| 31 | GO:0005618: cell wall | 4.55E-02 |
| 32 | GO:0009579: thylakoid | 4.83E-02 |