GO Enrichment Analysis of Co-expressed Genes with
AT5G58240
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 2 | GO:1900088: regulation of inositol biosynthetic process | 0.00E+00 |
| 3 | GO:1900091: regulation of raffinose biosynthetic process | 0.00E+00 |
| 4 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 5 | GO:0009661: chromoplast organization | 0.00E+00 |
| 6 | GO:0033365: protein localization to organelle | 1.38E-05 |
| 7 | GO:0071461: cellular response to redox state | 7.39E-05 |
| 8 | GO:0032956: regulation of actin cytoskeleton organization | 7.39E-05 |
| 9 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 7.39E-05 |
| 10 | GO:0016031: tRNA import into mitochondrion | 7.39E-05 |
| 11 | GO:0006285: base-excision repair, AP site formation | 7.39E-05 |
| 12 | GO:0016122: xanthophyll metabolic process | 1.77E-04 |
| 13 | GO:2000071: regulation of defense response by callose deposition | 1.77E-04 |
| 14 | GO:0080005: photosystem stoichiometry adjustment | 1.77E-04 |
| 15 | GO:0048571: long-day photoperiodism | 1.77E-04 |
| 16 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.77E-04 |
| 17 | GO:0016226: iron-sulfur cluster assembly | 2.87E-04 |
| 18 | GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion | 2.99E-04 |
| 19 | GO:0009150: purine ribonucleotide metabolic process | 2.99E-04 |
| 20 | GO:0031929: TOR signaling | 2.99E-04 |
| 21 | GO:0006696: ergosterol biosynthetic process | 2.99E-04 |
| 22 | GO:0009399: nitrogen fixation | 4.32E-04 |
| 23 | GO:0009963: positive regulation of flavonoid biosynthetic process | 4.32E-04 |
| 24 | GO:0009647: skotomorphogenesis | 4.32E-04 |
| 25 | GO:2001141: regulation of RNA biosynthetic process | 4.32E-04 |
| 26 | GO:0006542: glutamine biosynthetic process | 5.75E-04 |
| 27 | GO:0070534: protein K63-linked ubiquitination | 5.75E-04 |
| 28 | GO:0009649: entrainment of circadian clock | 5.75E-04 |
| 29 | GO:0034613: cellular protein localization | 5.75E-04 |
| 30 | GO:0016120: carotene biosynthetic process | 7.29E-04 |
| 31 | GO:0010117: photoprotection | 7.29E-04 |
| 32 | GO:0046283: anthocyanin-containing compound metabolic process | 7.29E-04 |
| 33 | GO:0006301: postreplication repair | 8.91E-04 |
| 34 | GO:0006555: methionine metabolic process | 8.91E-04 |
| 35 | GO:0010190: cytochrome b6f complex assembly | 8.91E-04 |
| 36 | GO:0019509: L-methionine salvage from methylthioadenosine | 1.06E-03 |
| 37 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 1.06E-03 |
| 38 | GO:0009658: chloroplast organization | 1.09E-03 |
| 39 | GO:0009853: photorespiration | 1.22E-03 |
| 40 | GO:0010161: red light signaling pathway | 1.24E-03 |
| 41 | GO:0009396: folic acid-containing compound biosynthetic process | 1.24E-03 |
| 42 | GO:0009231: riboflavin biosynthetic process | 1.43E-03 |
| 43 | GO:0048564: photosystem I assembly | 1.43E-03 |
| 44 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.43E-03 |
| 45 | GO:0050821: protein stabilization | 1.43E-03 |
| 46 | GO:0071482: cellular response to light stimulus | 1.63E-03 |
| 47 | GO:0035999: tetrahydrofolate interconversion | 2.05E-03 |
| 48 | GO:1900865: chloroplast RNA modification | 2.05E-03 |
| 49 | GO:0009641: shade avoidance | 2.28E-03 |
| 50 | GO:0006535: cysteine biosynthetic process from serine | 2.28E-03 |
| 51 | GO:0000103: sulfate assimilation | 2.28E-03 |
| 52 | GO:0009688: abscisic acid biosynthetic process | 2.28E-03 |
| 53 | GO:0009682: induced systemic resistance | 2.51E-03 |
| 54 | GO:0006352: DNA-templated transcription, initiation | 2.51E-03 |
| 55 | GO:0006790: sulfur compound metabolic process | 2.75E-03 |
| 56 | GO:0009785: blue light signaling pathway | 3.00E-03 |
| 57 | GO:0019344: cysteine biosynthetic process | 4.06E-03 |
| 58 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 4.93E-03 |
| 59 | GO:0007005: mitochondrion organization | 4.93E-03 |
| 60 | GO:0006284: base-excision repair | 5.54E-03 |
| 61 | GO:0055114: oxidation-reduction process | 5.54E-03 |
| 62 | GO:0016117: carotenoid biosynthetic process | 5.86E-03 |
| 63 | GO:0010118: stomatal movement | 6.18E-03 |
| 64 | GO:0006662: glycerol ether metabolic process | 6.51E-03 |
| 65 | GO:0002229: defense response to oomycetes | 7.53E-03 |
| 66 | GO:0030163: protein catabolic process | 8.25E-03 |
| 67 | GO:0016126: sterol biosynthetic process | 9.74E-03 |
| 68 | GO:0042128: nitrate assimilation | 1.05E-02 |
| 69 | GO:0048573: photoperiodism, flowering | 1.09E-02 |
| 70 | GO:0010043: response to zinc ion | 1.30E-02 |
| 71 | GO:0007568: aging | 1.30E-02 |
| 72 | GO:0010119: regulation of stomatal movement | 1.30E-02 |
| 73 | GO:0009867: jasmonic acid mediated signaling pathway | 1.39E-02 |
| 74 | GO:0034599: cellular response to oxidative stress | 1.43E-02 |
| 75 | GO:0008152: metabolic process | 1.58E-02 |
| 76 | GO:0015031: protein transport | 1.60E-02 |
| 77 | GO:0009640: photomorphogenesis | 1.66E-02 |
| 78 | GO:0031347: regulation of defense response | 1.90E-02 |
| 79 | GO:0009809: lignin biosynthetic process | 2.05E-02 |
| 80 | GO:0009585: red, far-red light phototransduction | 2.05E-02 |
| 81 | GO:0010224: response to UV-B | 2.10E-02 |
| 82 | GO:0009620: response to fungus | 2.47E-02 |
| 83 | GO:0006457: protein folding | 3.30E-02 |
| 84 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.22E-02 |
| 85 | GO:0006508: proteolysis | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 2 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 3 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 4 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 7.39E-05 |
| 5 | GO:0051996: squalene synthase activity | 7.39E-05 |
| 6 | GO:0016783: sulfurtransferase activity | 7.39E-05 |
| 7 | GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity | 7.39E-05 |
| 8 | GO:0015266: protein channel activity | 1.31E-04 |
| 9 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 1.77E-04 |
| 10 | GO:0004046: aminoacylase activity | 1.77E-04 |
| 11 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.77E-04 |
| 12 | GO:0008265: Mo-molybdopterin cofactor sulfurase activity | 2.99E-04 |
| 13 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 2.99E-04 |
| 14 | GO:0032947: protein complex scaffold | 2.99E-04 |
| 15 | GO:0004848: ureidoglycolate hydrolase activity | 2.99E-04 |
| 16 | GO:0003935: GTP cyclohydrolase II activity | 2.99E-04 |
| 17 | GO:0047627: adenylylsulfatase activity | 4.32E-04 |
| 18 | GO:0009001: serine O-acetyltransferase activity | 4.32E-04 |
| 19 | GO:0000254: C-4 methylsterol oxidase activity | 4.32E-04 |
| 20 | GO:0004792: thiosulfate sulfurtransferase activity | 4.32E-04 |
| 21 | GO:0001053: plastid sigma factor activity | 5.75E-04 |
| 22 | GO:0019104: DNA N-glycosylase activity | 5.75E-04 |
| 23 | GO:0016987: sigma factor activity | 5.75E-04 |
| 24 | GO:0003824: catalytic activity | 6.16E-04 |
| 25 | GO:0004356: glutamate-ammonia ligase activity | 7.29E-04 |
| 26 | GO:0030151: molybdenum ion binding | 7.29E-04 |
| 27 | GO:0016407: acetyltransferase activity | 7.29E-04 |
| 28 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.73E-04 |
| 29 | GO:0016621: cinnamoyl-CoA reductase activity | 1.24E-03 |
| 30 | GO:0008233: peptidase activity | 1.40E-03 |
| 31 | GO:0005198: structural molecule activity | 1.74E-03 |
| 32 | GO:0071949: FAD binding | 1.83E-03 |
| 33 | GO:0004129: cytochrome-c oxidase activity | 2.51E-03 |
| 34 | GO:0051082: unfolded protein binding | 2.95E-03 |
| 35 | GO:0031072: heat shock protein binding | 3.00E-03 |
| 36 | GO:0016491: oxidoreductase activity | 3.83E-03 |
| 37 | GO:0051536: iron-sulfur cluster binding | 4.06E-03 |
| 38 | GO:0005528: FK506 binding | 4.06E-03 |
| 39 | GO:0047134: protein-disulfide reductase activity | 5.86E-03 |
| 40 | GO:0004791: thioredoxin-disulfide reductase activity | 6.84E-03 |
| 41 | GO:0050662: coenzyme binding | 6.84E-03 |
| 42 | GO:0005515: protein binding | 6.97E-03 |
| 43 | GO:0048038: quinone binding | 7.53E-03 |
| 44 | GO:0016787: hydrolase activity | 8.02E-03 |
| 45 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.25E-03 |
| 46 | GO:0061630: ubiquitin protein ligase activity | 1.02E-02 |
| 47 | GO:0005506: iron ion binding | 1.16E-02 |
| 48 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.39E-02 |
| 49 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.76E-02 |
| 50 | GO:0043621: protein self-association | 1.76E-02 |
| 51 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.85E-02 |
| 52 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.05E-02 |
| 53 | GO:0031625: ubiquitin protein ligase binding | 2.21E-02 |
| 54 | GO:0015035: protein disulfide oxidoreductase activity | 2.69E-02 |
| 55 | GO:0004386: helicase activity | 2.81E-02 |
| 56 | GO:0030170: pyridoxal phosphate binding | 3.33E-02 |
| 57 | GO:0005525: GTP binding | 4.19E-02 |
| 58 | GO:0042802: identical protein binding | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.29E-10 |
| 2 | GO:0000152: nuclear ubiquitin ligase complex | 7.39E-05 |
| 3 | GO:0031932: TORC2 complex | 7.39E-05 |
| 4 | GO:0005747: mitochondrial respiratory chain complex I | 2.59E-04 |
| 5 | GO:0031931: TORC1 complex | 2.99E-04 |
| 6 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.42E-04 |
| 7 | GO:0009527: plastid outer membrane | 5.75E-04 |
| 8 | GO:0031372: UBC13-MMS2 complex | 5.75E-04 |
| 9 | GO:0009517: PSII associated light-harvesting complex II | 5.75E-04 |
| 10 | GO:0009570: chloroplast stroma | 1.27E-03 |
| 11 | GO:0031969: chloroplast membrane | 1.43E-03 |
| 12 | GO:0042644: chloroplast nucleoid | 1.83E-03 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.83E-03 |
| 14 | GO:0016604: nuclear body | 2.05E-03 |
| 15 | GO:0045271: respiratory chain complex I | 4.34E-03 |
| 16 | GO:0009535: chloroplast thylakoid membrane | 8.57E-03 |
| 17 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 8.58E-03 |
| 18 | GO:0031977: thylakoid lumen | 1.57E-02 |
| 19 | GO:0005739: mitochondrion | 1.68E-02 |
| 20 | GO:0031966: mitochondrial membrane | 1.95E-02 |
| 21 | GO:0016607: nuclear speck | 2.37E-02 |
| 22 | GO:0009941: chloroplast envelope | 2.60E-02 |
| 23 | GO:0005777: peroxisome | 2.93E-02 |
| 24 | GO:0010287: plastoglobule | 2.98E-02 |
| 25 | GO:0009543: chloroplast thylakoid lumen | 3.10E-02 |
| 26 | GO:0005759: mitochondrial matrix | 3.64E-02 |