GO Enrichment Analysis of Co-expressed Genes with
AT5G58220
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046890: regulation of lipid biosynthetic process | 0.00E+00 |
| 2 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 3 | GO:0046292: formaldehyde metabolic process | 0.00E+00 |
| 4 | GO:0030970: retrograde protein transport, ER to cytosol | 0.00E+00 |
| 5 | GO:0006721: terpenoid metabolic process | 0.00E+00 |
| 6 | GO:0010513: positive regulation of phosphatidylinositol biosynthetic process | 0.00E+00 |
| 7 | GO:0006069: ethanol oxidation | 0.00E+00 |
| 8 | GO:0006489: dolichyl diphosphate biosynthetic process | 0.00E+00 |
| 9 | GO:0001881: receptor recycling | 0.00E+00 |
| 10 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 11 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.72E-14 |
| 12 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.74E-06 |
| 13 | GO:0046686: response to cadmium ion | 1.64E-05 |
| 14 | GO:0006487: protein N-linked glycosylation | 2.32E-05 |
| 15 | GO:0043248: proteasome assembly | 4.28E-05 |
| 16 | GO:0016487: farnesol metabolic process | 1.48E-04 |
| 17 | GO:0009240: isopentenyl diphosphate biosynthetic process | 1.48E-04 |
| 18 | GO:0010265: SCF complex assembly | 1.48E-04 |
| 19 | GO:0010043: response to zinc ion | 2.92E-04 |
| 20 | GO:0009853: photorespiration | 3.29E-04 |
| 21 | GO:0055088: lipid homeostasis | 3.38E-04 |
| 22 | GO:0051788: response to misfolded protein | 3.38E-04 |
| 23 | GO:0006432: phenylalanyl-tRNA aminoacylation | 3.38E-04 |
| 24 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 3.38E-04 |
| 25 | GO:0071494: cellular response to UV-C | 5.54E-04 |
| 26 | GO:0008333: endosome to lysosome transport | 5.54E-04 |
| 27 | GO:0046417: chorismate metabolic process | 5.54E-04 |
| 28 | GO:0045793: positive regulation of cell size | 5.54E-04 |
| 29 | GO:0006760: folic acid-containing compound metabolic process | 5.54E-04 |
| 30 | GO:0006012: galactose metabolic process | 7.78E-04 |
| 31 | GO:0006107: oxaloacetate metabolic process | 7.93E-04 |
| 32 | GO:0009647: skotomorphogenesis | 7.93E-04 |
| 33 | GO:1901332: negative regulation of lateral root development | 7.93E-04 |
| 34 | GO:0006168: adenine salvage | 7.93E-04 |
| 35 | GO:1902290: positive regulation of defense response to oomycetes | 7.93E-04 |
| 36 | GO:0001676: long-chain fatty acid metabolic process | 7.93E-04 |
| 37 | GO:0032877: positive regulation of DNA endoreduplication | 7.93E-04 |
| 38 | GO:0006166: purine ribonucleoside salvage | 7.93E-04 |
| 39 | GO:0000413: protein peptidyl-prolyl isomerization | 9.81E-04 |
| 40 | GO:0051781: positive regulation of cell division | 1.05E-03 |
| 41 | GO:0010363: regulation of plant-type hypersensitive response | 1.05E-03 |
| 42 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.05E-03 |
| 43 | GO:0032366: intracellular sterol transport | 1.05E-03 |
| 44 | GO:0044205: 'de novo' UMP biosynthetic process | 1.05E-03 |
| 45 | GO:0006662: glycerol ether metabolic process | 1.05E-03 |
| 46 | GO:0015986: ATP synthesis coupled proton transport | 1.13E-03 |
| 47 | GO:0044209: AMP salvage | 1.33E-03 |
| 48 | GO:0036065: fucosylation | 1.33E-03 |
| 49 | GO:0030163: protein catabolic process | 1.46E-03 |
| 50 | GO:0009612: response to mechanical stimulus | 1.96E-03 |
| 51 | GO:0048528: post-embryonic root development | 2.30E-03 |
| 52 | GO:0071446: cellular response to salicylic acid stimulus | 2.30E-03 |
| 53 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 2.30E-03 |
| 54 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.36E-03 |
| 55 | GO:1900150: regulation of defense response to fungus | 2.66E-03 |
| 56 | GO:0006506: GPI anchor biosynthetic process | 2.66E-03 |
| 57 | GO:0009690: cytokinin metabolic process | 2.66E-03 |
| 58 | GO:0000028: ribosomal small subunit assembly | 2.66E-03 |
| 59 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.66E-03 |
| 60 | GO:0006526: arginine biosynthetic process | 3.04E-03 |
| 61 | GO:0034599: cellular response to oxidative stress | 3.17E-03 |
| 62 | GO:0009733: response to auxin | 3.36E-03 |
| 63 | GO:0046685: response to arsenic-containing substance | 3.44E-03 |
| 64 | GO:0009821: alkaloid biosynthetic process | 3.44E-03 |
| 65 | GO:0009926: auxin polar transport | 3.90E-03 |
| 66 | GO:0000103: sulfate assimilation | 4.29E-03 |
| 67 | GO:0043069: negative regulation of programmed cell death | 4.29E-03 |
| 68 | GO:0010015: root morphogenesis | 4.73E-03 |
| 69 | GO:0009073: aromatic amino acid family biosynthetic process | 4.73E-03 |
| 70 | GO:0016925: protein sumoylation | 5.20E-03 |
| 71 | GO:0006486: protein glycosylation | 5.25E-03 |
| 72 | GO:0006807: nitrogen compound metabolic process | 5.68E-03 |
| 73 | GO:0006108: malate metabolic process | 5.68E-03 |
| 74 | GO:2000028: regulation of photoperiodism, flowering | 5.68E-03 |
| 75 | GO:0045454: cell redox homeostasis | 5.88E-03 |
| 76 | GO:0002237: response to molecule of bacterial origin | 6.17E-03 |
| 77 | GO:0007034: vacuolar transport | 6.17E-03 |
| 78 | GO:0009969: xyloglucan biosynthetic process | 6.67E-03 |
| 79 | GO:0009620: response to fungus | 6.82E-03 |
| 80 | GO:0006071: glycerol metabolic process | 7.20E-03 |
| 81 | GO:0009751: response to salicylic acid | 7.53E-03 |
| 82 | GO:0009116: nucleoside metabolic process | 7.74E-03 |
| 83 | GO:0009863: salicylic acid mediated signaling pathway | 7.74E-03 |
| 84 | GO:0006406: mRNA export from nucleus | 7.74E-03 |
| 85 | GO:0019953: sexual reproduction | 8.29E-03 |
| 86 | GO:0008299: isoprenoid biosynthetic process | 8.29E-03 |
| 87 | GO:0010431: seed maturation | 8.85E-03 |
| 88 | GO:0061077: chaperone-mediated protein folding | 8.85E-03 |
| 89 | GO:0015992: proton transport | 8.85E-03 |
| 90 | GO:0030433: ubiquitin-dependent ERAD pathway | 9.43E-03 |
| 91 | GO:0019748: secondary metabolic process | 9.43E-03 |
| 92 | GO:0042147: retrograde transport, endosome to Golgi | 1.13E-02 |
| 93 | GO:0015991: ATP hydrolysis coupled proton transport | 1.19E-02 |
| 94 | GO:0034220: ion transmembrane transport | 1.19E-02 |
| 95 | GO:0010051: xylem and phloem pattern formation | 1.19E-02 |
| 96 | GO:0007623: circadian rhythm | 1.29E-02 |
| 97 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.35E-02 |
| 98 | GO:0006623: protein targeting to vacuole | 1.39E-02 |
| 99 | GO:0048825: cotyledon development | 1.39E-02 |
| 100 | GO:0080156: mitochondrial mRNA modification | 1.45E-02 |
| 101 | GO:0010193: response to ozone | 1.45E-02 |
| 102 | GO:0009828: plant-type cell wall loosening | 1.67E-02 |
| 103 | GO:0010286: heat acclimation | 1.74E-02 |
| 104 | GO:0000910: cytokinesis | 1.81E-02 |
| 105 | GO:0009615: response to virus | 1.89E-02 |
| 106 | GO:0009826: unidimensional cell growth | 1.93E-02 |
| 107 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.97E-02 |
| 108 | GO:0009627: systemic acquired resistance | 2.04E-02 |
| 109 | GO:0015995: chlorophyll biosynthetic process | 2.12E-02 |
| 110 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.12E-02 |
| 111 | GO:0009651: response to salt stress | 2.24E-02 |
| 112 | GO:0009817: defense response to fungus, incompatible interaction | 2.28E-02 |
| 113 | GO:0008219: cell death | 2.28E-02 |
| 114 | GO:0010311: lateral root formation | 2.36E-02 |
| 115 | GO:0009832: plant-type cell wall biogenesis | 2.36E-02 |
| 116 | GO:0006499: N-terminal protein myristoylation | 2.45E-02 |
| 117 | GO:0000724: double-strand break repair via homologous recombination | 2.61E-02 |
| 118 | GO:0045087: innate immune response | 2.70E-02 |
| 119 | GO:0006631: fatty acid metabolic process | 3.05E-02 |
| 120 | GO:0006629: lipid metabolic process | 3.67E-02 |
| 121 | GO:0009736: cytokinin-activated signaling pathway | 4.00E-02 |
| 122 | GO:0048316: seed development | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050152: omega-amidase activity | 0.00E+00 |
| 2 | GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity | 0.00E+00 |
| 3 | GO:0004151: dihydroorotase activity | 0.00E+00 |
| 4 | GO:0047886: farnesol dehydrogenase activity | 0.00E+00 |
| 5 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 6 | GO:0080007: S-nitrosoglutathione reductase activity | 0.00E+00 |
| 7 | GO:0004298: threonine-type endopeptidase activity | 1.30E-29 |
| 8 | GO:0008233: peptidase activity | 1.99E-18 |
| 9 | GO:0004576: oligosaccharyl transferase activity | 1.75E-05 |
| 10 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 2.86E-05 |
| 11 | GO:0004034: aldose 1-epimerase activity | 1.04E-04 |
| 12 | GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity | 1.48E-04 |
| 13 | GO:0004452: isopentenyl-diphosphate delta-isomerase activity | 1.48E-04 |
| 14 | GO:0004129: cytochrome-c oxidase activity | 2.65E-04 |
| 15 | GO:0004826: phenylalanine-tRNA ligase activity | 3.38E-04 |
| 16 | GO:0004106: chorismate mutase activity | 3.38E-04 |
| 17 | GO:0019172: glyoxalase III activity | 3.38E-04 |
| 18 | GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity | 3.38E-04 |
| 19 | GO:0008430: selenium binding | 5.54E-04 |
| 20 | GO:0004557: alpha-galactosidase activity | 5.54E-04 |
| 21 | GO:0052692: raffinose alpha-galactosidase activity | 5.54E-04 |
| 22 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.57E-04 |
| 23 | GO:0003999: adenine phosphoribosyltransferase activity | 7.93E-04 |
| 24 | GO:0047134: protein-disulfide reductase activity | 9.10E-04 |
| 25 | GO:0010011: auxin binding | 1.05E-03 |
| 26 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.05E-03 |
| 27 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.05E-03 |
| 28 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.05E-03 |
| 29 | GO:0015035: protein disulfide oxidoreductase activity | 1.07E-03 |
| 30 | GO:0004791: thioredoxin-disulfide reductase activity | 1.13E-03 |
| 31 | GO:0004040: amidase activity | 1.33E-03 |
| 32 | GO:0031386: protein tag | 1.33E-03 |
| 33 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.46E-03 |
| 34 | GO:0102391: decanoate--CoA ligase activity | 1.96E-03 |
| 35 | GO:0004602: glutathione peroxidase activity | 1.96E-03 |
| 36 | GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity | 2.30E-03 |
| 37 | GO:0042162: telomeric DNA binding | 2.30E-03 |
| 38 | GO:0008143: poly(A) binding | 2.30E-03 |
| 39 | GO:0008320: protein transmembrane transporter activity | 2.30E-03 |
| 40 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.30E-03 |
| 41 | GO:0050897: cobalt ion binding | 2.77E-03 |
| 42 | GO:0003697: single-stranded DNA binding | 3.03E-03 |
| 43 | GO:0008417: fucosyltransferase activity | 3.44E-03 |
| 44 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 3.44E-03 |
| 45 | GO:0045309: protein phosphorylated amino acid binding | 3.86E-03 |
| 46 | GO:0016844: strictosidine synthase activity | 3.86E-03 |
| 47 | GO:0043621: protein self-association | 4.22E-03 |
| 48 | GO:0008794: arsenate reductase (glutaredoxin) activity | 4.73E-03 |
| 49 | GO:0019904: protein domain specific binding | 4.73E-03 |
| 50 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 4.73E-03 |
| 51 | GO:0000049: tRNA binding | 5.20E-03 |
| 52 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.68E-03 |
| 53 | GO:0004089: carbonate dehydratase activity | 5.68E-03 |
| 54 | GO:0030246: carbohydrate binding | 5.69E-03 |
| 55 | GO:0004175: endopeptidase activity | 6.17E-03 |
| 56 | GO:0008266: poly(U) RNA binding | 6.17E-03 |
| 57 | GO:0005507: copper ion binding | 6.20E-03 |
| 58 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 6.40E-03 |
| 59 | GO:0005528: FK506 binding | 7.74E-03 |
| 60 | GO:0004540: ribonuclease activity | 8.85E-03 |
| 61 | GO:0016853: isomerase activity | 1.32E-02 |
| 62 | GO:0050662: coenzyme binding | 1.32E-02 |
| 63 | GO:0004872: receptor activity | 1.39E-02 |
| 64 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 1.45E-02 |
| 65 | GO:0008237: metallopeptidase activity | 1.74E-02 |
| 66 | GO:0015250: water channel activity | 1.89E-02 |
| 67 | GO:0016788: hydrolase activity, acting on ester bonds | 2.04E-02 |
| 68 | GO:0003993: acid phosphatase activity | 2.79E-02 |
| 69 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.96E-02 |
| 70 | GO:0004185: serine-type carboxypeptidase activity | 3.23E-02 |
| 71 | GO:0004722: protein serine/threonine phosphatase activity | 3.27E-02 |
| 72 | GO:0008234: cysteine-type peptidase activity | 4.30E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 7.77E-30 |
| 2 | GO:0005839: proteasome core complex | 1.30E-29 |
| 3 | GO:0019773: proteasome core complex, alpha-subunit complex | 9.42E-19 |
| 4 | GO:0005829: cytosol | 6.09E-12 |
| 5 | GO:0005773: vacuole | 3.99E-08 |
| 6 | GO:0005783: endoplasmic reticulum | 1.47E-06 |
| 7 | GO:0005747: mitochondrial respiratory chain complex I | 5.72E-06 |
| 8 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 1.62E-05 |
| 9 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 1.75E-05 |
| 10 | GO:0045271: respiratory chain complex I | 2.74E-05 |
| 11 | GO:0008250: oligosaccharyltransferase complex | 2.86E-05 |
| 12 | GO:0022626: cytosolic ribosome | 1.40E-04 |
| 13 | GO:0019774: proteasome core complex, beta-subunit complex | 1.48E-04 |
| 14 | GO:0005788: endoplasmic reticulum lumen | 1.79E-04 |
| 15 | GO:0005774: vacuolar membrane | 2.32E-04 |
| 16 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.65E-04 |
| 17 | GO:0009507: chloroplast | 3.26E-04 |
| 18 | GO:0005697: telomerase holoenzyme complex | 3.38E-04 |
| 19 | GO:0005789: endoplasmic reticulum membrane | 4.24E-04 |
| 20 | GO:0046861: glyoxysomal membrane | 5.54E-04 |
| 21 | GO:0031966: mitochondrial membrane | 6.11E-04 |
| 22 | GO:0033180: proton-transporting V-type ATPase, V1 domain | 7.93E-04 |
| 23 | GO:0005746: mitochondrial respiratory chain | 1.33E-03 |
| 24 | GO:0032580: Golgi cisterna membrane | 1.56E-03 |
| 25 | GO:0030904: retromer complex | 1.63E-03 |
| 26 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 1.63E-03 |
| 27 | GO:0005771: multivesicular body | 1.63E-03 |
| 28 | GO:0032588: trans-Golgi network membrane | 1.63E-03 |
| 29 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 2.30E-03 |
| 30 | GO:0005794: Golgi apparatus | 2.87E-03 |
| 31 | GO:0009514: glyoxysome | 3.04E-03 |
| 32 | GO:0031090: organelle membrane | 3.44E-03 |
| 33 | GO:0005763: mitochondrial small ribosomal subunit | 3.44E-03 |
| 34 | GO:0009508: plastid chromosome | 5.68E-03 |
| 35 | GO:0005618: cell wall | 1.03E-02 |
| 36 | GO:0016020: membrane | 1.52E-02 |
| 37 | GO:0009295: nucleoid | 1.74E-02 |
| 38 | GO:0005730: nucleolus | 2.32E-02 |
| 39 | GO:0005737: cytoplasm | 2.51E-02 |
| 40 | GO:0015934: large ribosomal subunit | 2.53E-02 |
| 41 | GO:0048046: apoplast | 2.56E-02 |
| 42 | GO:0005819: spindle | 2.87E-02 |
| 43 | GO:0031902: late endosome membrane | 3.05E-02 |
| 44 | GO:0005739: mitochondrion | 3.81E-02 |
| 45 | GO:0005635: nuclear envelope | 4.20E-02 |
| 46 | GO:0016607: nuclear speck | 4.61E-02 |