co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G57710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001142: nicotinate transport	0.00E+00
2	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
3	GO:0006005: L-fucose biosynthetic process	0.00E+00
4	GO:0032499: detection of peptidoglycan	0.00E+00
5	GO:2001143: N-methylnicotinate transport	0.00E+00
6	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
7	GO:0009699: phenylpropanoid biosynthetic process	1.19E-06
8	GO:0002679: respiratory burst involved in defense response	6.48E-06
9	GO:0051131: chaperone-mediated protein complex assembly	6.48E-06
10	GO:0045010: actin nucleation	7.49E-05
11	GO:0006468: protein phosphorylation	7.72E-05
12	GO:0051865: protein autoubiquitination	1.17E-04
13	GO:0042350: GDP-L-fucose biosynthetic process	1.20E-04
14	GO:0051014: actin filament severing	1.20E-04
15	GO:0071277: cellular response to calcium ion	1.20E-04
16	GO:0018920: glyphosate metabolic process	1.20E-04
17	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.20E-04
18	GO:0099636: cytoplasmic streaming	1.20E-04
19	GO:0032491: detection of molecule of fungal origin	1.20E-04
20	GO:0046167: glycerol-3-phosphate biosynthetic process	1.20E-04
21	GO:0009698: phenylpropanoid metabolic process	1.96E-04
22	GO:0007166: cell surface receptor signaling pathway	2.39E-04
23	GO:0009805: coumarin biosynthetic process	2.77E-04
24	GO:0006641: triglyceride metabolic process	2.77E-04
25	GO:0010372: positive regulation of gibberellin biosynthetic process	2.77E-04
26	GO:0046939: nucleotide phosphorylation	2.77E-04
27	GO:0010155: regulation of proton transport	2.77E-04
28	GO:0009225: nucleotide-sugar metabolic process	3.30E-04
29	GO:0070475: rRNA base methylation	4.58E-04
30	GO:0006556: S-adenosylmethionine biosynthetic process	4.58E-04
31	GO:0019563: glycerol catabolic process	4.58E-04
32	GO:0010165: response to X-ray	4.58E-04
33	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	4.58E-04
34	GO:0010200: response to chitin	5.73E-04
35	GO:0006072: glycerol-3-phosphate metabolic process	6.57E-04
36	GO:0030100: regulation of endocytosis	6.57E-04
37	GO:0071323: cellular response to chitin	6.57E-04
38	GO:0045227: capsule polysaccharide biosynthetic process	8.72E-04
39	GO:0033320: UDP-D-xylose biosynthetic process	8.72E-04
40	GO:0051764: actin crosslink formation	8.72E-04
41	GO:0033358: UDP-L-arabinose biosynthetic process	8.72E-04
42	GO:0071219: cellular response to molecule of bacterial origin	8.72E-04
43	GO:0010188: response to microbial phytotoxin	8.72E-04
44	GO:0043484: regulation of RNA splicing	1.10E-03
45	GO:0030041: actin filament polymerization	1.10E-03
46	GO:0000470: maturation of LSU-rRNA	1.35E-03
47	GO:0042732: D-xylose metabolic process	1.35E-03
48	GO:0048317: seed morphogenesis	1.35E-03
49	GO:0006796: phosphate-containing compound metabolic process	1.35E-03
50	GO:0033365: protein localization to organelle	1.35E-03
51	GO:0009423: chorismate biosynthetic process	1.61E-03
52	GO:0006744: ubiquinone biosynthetic process	1.89E-03
53	GO:0051693: actin filament capping	1.89E-03
54	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.89E-03
55	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.19E-03
56	GO:1900150: regulation of defense response to fungus	2.19E-03
57	GO:0006402: mRNA catabolic process	2.19E-03
58	GO:0050821: protein stabilization	2.19E-03
59	GO:0048658: anther wall tapetum development	2.19E-03
60	GO:0016310: phosphorylation	2.26E-03
61	GO:0045087: innate immune response	2.28E-03
62	GO:0009932: cell tip growth	2.50E-03
63	GO:0009808: lignin metabolic process	2.50E-03
64	GO:0007062: sister chromatid cohesion	2.82E-03
65	GO:0090332: stomatal closure	3.16E-03
66	GO:0030042: actin filament depolymerization	3.16E-03
67	GO:0008202: steroid metabolic process	3.16E-03
68	GO:0080167: response to karrikin	3.23E-03
69	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.37E-03
70	GO:0006032: chitin catabolic process	3.51E-03
71	GO:0010015: root morphogenesis	3.88E-03
72	GO:0009073: aromatic amino acid family biosynthetic process	3.88E-03
73	GO:0009809: lignin biosynthetic process	3.93E-03
74	GO:0000266: mitochondrial fission	4.26E-03
75	GO:0006302: double-strand break repair	5.04E-03
76	GO:0034605: cellular response to heat	5.04E-03
77	GO:0002237: response to molecule of bacterial origin	5.04E-03
78	GO:0007015: actin filament organization	5.04E-03
79	GO:0009620: response to fungus	5.10E-03
80	GO:0009408: response to heat	5.29E-03
81	GO:0006396: RNA processing	5.75E-03
82	GO:0009742: brassinosteroid mediated signaling pathway	5.91E-03
83	GO:0009863: salicylic acid mediated signaling pathway	6.32E-03
84	GO:0007010: cytoskeleton organization	6.32E-03
85	GO:0010187: negative regulation of seed germination	6.32E-03
86	GO:0080147: root hair cell development	6.32E-03
87	GO:0051017: actin filament bundle assembly	6.32E-03
88	GO:0042742: defense response to bacterium	6.77E-03
89	GO:0061077: chaperone-mediated protein folding	7.22E-03
90	GO:0003333: amino acid transmembrane transport	7.22E-03
91	GO:0016998: cell wall macromolecule catabolic process	7.22E-03
92	GO:0006730: one-carbon metabolic process	7.69E-03
93	GO:0071215: cellular response to abscisic acid stimulus	8.18E-03
94	GO:0009686: gibberellin biosynthetic process	8.18E-03
95	GO:0009411: response to UV	8.18E-03
96	GO:0040007: growth	8.18E-03
97	GO:0006012: galactose metabolic process	8.18E-03
98	GO:0006817: phosphate ion transport	8.66E-03
99	GO:0009306: protein secretion	8.66E-03
100	GO:0042631: cellular response to water deprivation	9.68E-03
101	GO:0006606: protein import into nucleus	9.68E-03
102	GO:0009960: endosperm development	1.02E-02
103	GO:0006885: regulation of pH	1.02E-02
104	GO:0048544: recognition of pollen	1.07E-02
105	GO:0007059: chromosome segregation	1.07E-02
106	GO:0006952: defense response	1.12E-02
107	GO:0009611: response to wounding	1.13E-02
108	GO:0002229: defense response to oomycetes	1.18E-02
109	GO:0006891: intra-Golgi vesicle-mediated transport	1.18E-02
110	GO:0031047: gene silencing by RNA	1.24E-02
111	GO:0032502: developmental process	1.24E-02
112	GO:0010090: trichome morphogenesis	1.30E-02
113	GO:1901657: glycosyl compound metabolic process	1.30E-02
114	GO:0010286: heat acclimation	1.41E-02
115	GO:0006904: vesicle docking involved in exocytosis	1.41E-02
116	GO:0016579: protein deubiquitination	1.47E-02
117	GO:0006457: protein folding	1.52E-02
118	GO:0001666: response to hypoxia	1.54E-02
119	GO:0009615: response to virus	1.54E-02
120	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.60E-02
121	GO:0009816: defense response to bacterium, incompatible interaction	1.60E-02
122	GO:0048573: photoperiodism, flowering	1.72E-02
123	GO:0048366: leaf development	1.76E-02
124	GO:0016049: cell growth	1.79E-02
125	GO:0009817: defense response to fungus, incompatible interaction	1.85E-02
126	GO:0008219: cell death	1.85E-02
127	GO:0048767: root hair elongation	1.92E-02
128	GO:0009813: flavonoid biosynthetic process	1.92E-02
129	GO:0006865: amino acid transport	2.12E-02
130	GO:0000724: double-strand break repair via homologous recombination	2.12E-02
131	GO:0006839: mitochondrial transport	2.41E-02
132	GO:0006887: exocytosis	2.48E-02
133	GO:0006897: endocytosis	2.48E-02
134	GO:0009414: response to water deprivation	2.59E-02
135	GO:0008283: cell proliferation	2.63E-02
136	GO:0009965: leaf morphogenesis	2.85E-02
137	GO:0006397: mRNA processing	2.86E-02
138	GO:0008152: metabolic process	3.02E-02
139	GO:0006812: cation transport	3.09E-02
140	GO:0006486: protein glycosylation	3.25E-02
141	GO:0006813: potassium ion transport	3.25E-02
142	GO:0006857: oligopeptide transport	3.41E-02
143	GO:0016567: protein ubiquitination	3.57E-02
144	GO:0043086: negative regulation of catalytic activity	3.66E-02
145	GO:0016569: covalent chromatin modification	4.00E-02
146	GO:0005975: carbohydrate metabolic process	4.47E-02
147	GO:0046686: response to cadmium ion	4.61E-02
148	GO:0009555: pollen development	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0090416: nicotinate transporter activity	0.00E+00
2	GO:0005522: profilin binding	0.00E+00
3	GO:0016710: trans-cinnamate 4-monooxygenase activity	0.00E+00
4	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
5	GO:0046409: p-coumarate 3-hydroxylase activity	0.00E+00
6	GO:0004370: glycerol kinase activity	0.00E+00
7	GO:2001080: chitosan binding	0.00E+00
8	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
9	GO:0005524: ATP binding	3.28E-08
10	GO:0016301: kinase activity	6.70E-06
11	GO:0016207: 4-coumarate-CoA ligase activity	1.17E-04
12	GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity	1.20E-04
13	GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity	1.20E-04
14	GO:0050577: GDP-L-fucose synthase activity	1.20E-04
15	GO:0003729: mRNA binding	1.96E-04
16	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.97E-04
17	GO:0004674: protein serine/threonine kinase activity	2.70E-04
18	GO:0019200: carbohydrate kinase activity	2.77E-04
19	GO:0004478: methionine adenosyltransferase activity	4.58E-04
20	GO:0019201: nucleotide kinase activity	6.57E-04
21	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	6.57E-04
22	GO:0003779: actin binding	6.95E-04
23	GO:0019199: transmembrane receptor protein kinase activity	8.72E-04
24	GO:0050373: UDP-arabinose 4-epimerase activity	8.72E-04
25	GO:0047631: ADP-ribose diphosphatase activity	1.10E-03
26	GO:0002020: protease binding	1.10E-03
27	GO:0051015: actin filament binding	1.11E-03
28	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.30E-03
29	GO:0048040: UDP-glucuronate decarboxylase activity	1.35E-03
30	GO:0035673: oligopeptide transmembrane transporter activity	1.35E-03
31	GO:0016462: pyrophosphatase activity	1.35E-03
32	GO:0070403: NAD+ binding	1.61E-03
33	GO:0003978: UDP-glucose 4-epimerase activity	1.61E-03
34	GO:0004017: adenylate kinase activity	1.61E-03
35	GO:0004656: procollagen-proline 4-dioxygenase activity	1.61E-03
36	GO:0004427: inorganic diphosphatase activity	1.89E-03
37	GO:0008143: poly(A) binding	1.89E-03
38	GO:0004143: diacylglycerol kinase activity	1.89E-03
39	GO:0004525: ribonuclease III activity	2.19E-03
40	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.19E-03
41	GO:0008142: oxysterol binding	2.50E-03
42	GO:0003951: NAD+ kinase activity	2.50E-03
43	GO:0050660: flavin adenine dinucleotide binding	2.96E-03
44	GO:0004672: protein kinase activity	3.21E-03
45	GO:0004568: chitinase activity	3.51E-03
46	GO:0008378: galactosyltransferase activity	4.26E-03
47	GO:0015198: oligopeptide transporter activity	4.26E-03
48	GO:0008139: nuclear localization sequence binding	4.64E-03
49	GO:0016874: ligase activity	5.26E-03
50	GO:0008061: chitin binding	5.46E-03
51	GO:0051082: unfolded protein binding	5.58E-03
52	GO:0009055: electron carrier activity	5.78E-03
53	GO:0031418: L-ascorbic acid binding	6.32E-03
54	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	7.22E-03
55	GO:0033612: receptor serine/threonine kinase binding	7.22E-03
56	GO:0019706: protein-cysteine S-palmitoyltransferase activity	7.22E-03
57	GO:0022891: substrate-specific transmembrane transporter activity	8.18E-03
58	GO:0008565: protein transporter activity	8.35E-03
59	GO:0005451: monovalent cation:proton antiporter activity	9.68E-03
60	GO:0008536: Ran GTPase binding	1.02E-02
61	GO:0016853: isomerase activity	1.07E-02
62	GO:0015299: solute:proton antiporter activity	1.07E-02
63	GO:0050662: coenzyme binding	1.07E-02
64	GO:0004842: ubiquitin-protein transferase activity	1.11E-02
65	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.18E-02
66	GO:0042802: identical protein binding	1.23E-02
67	GO:0004518: nuclease activity	1.24E-02
68	GO:0015385: sodium:proton antiporter activity	1.30E-02
69	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.41E-02
70	GO:0102483: scopolin beta-glucosidase activity	1.72E-02
71	GO:0030247: polysaccharide binding	1.72E-02
72	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.19E-02
73	GO:0008422: beta-glucosidase activity	2.33E-02
74	GO:0005506: iron ion binding	2.62E-02
75	GO:0035091: phosphatidylinositol binding	2.78E-02
76	GO:0005515: protein binding	2.92E-02
77	GO:0015171: amino acid transmembrane transporter activity	3.49E-02
78	GO:0022857: transmembrane transporter activity	4.00E-02
79	GO:0008026: ATP-dependent helicase activity	4.35E-02
80	GO:0016758: transferase activity, transferring hexosyl groups	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.98E-09
2	GO:0016021: integral component of membrane	4.41E-06
3	GO:0010494: cytoplasmic stress granule	1.17E-04
4	GO:0005911: cell-cell junction	1.20E-04
5	GO:0016442: RISC complex	1.20E-04
6	GO:0030915: Smc5-Smc6 complex	1.10E-03
7	GO:0032580: Golgi cisterna membrane	1.17E-03
8	GO:0016363: nuclear matrix	1.61E-03
9	GO:0009506: plasmodesma	3.60E-03
10	GO:0005884: actin filament	3.88E-03
11	GO:0048471: perinuclear region of cytoplasm	3.88E-03
12	GO:0010008: endosome membrane	4.79E-03
13	GO:0005795: Golgi stack	5.46E-03
14	GO:0005768: endosome	5.77E-03
15	GO:0043234: protein complex	5.88E-03
16	GO:0005783: endoplasmic reticulum	6.15E-03
17	GO:0005741: mitochondrial outer membrane	7.22E-03
18	GO:0005794: Golgi apparatus	7.74E-03
19	GO:0005829: cytosol	8.01E-03
20	GO:0009505: plant-type cell wall	9.54E-03
21	GO:0031965: nuclear membrane	1.13E-02
22	GO:0000145: exocyst	1.24E-02
23	GO:0005789: endoplasmic reticulum membrane	1.29E-02
24	GO:0005774: vacuolar membrane	1.43E-02
25	GO:0000932: P-body	1.54E-02
26	GO:0005788: endoplasmic reticulum lumen	1.60E-02
27	GO:0005618: cell wall	1.80E-02
28	GO:0090406: pollen tube	2.63E-02
29	GO:0005856: cytoskeleton	2.85E-02
30	GO:0031966: mitochondrial membrane	3.09E-02
31	GO:0005635: nuclear envelope	3.41E-02
32	GO:0005834: heterotrimeric G-protein complex	3.83E-02
33	GO:0000139: Golgi membrane	3.89E-02
34	GO:0005623: cell	4.99E-02