Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G57480

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080053: response to phenylalanine0.00E+00
2GO:0033587: shikimate biosynthetic process0.00E+00
3GO:0045730: respiratory burst0.00E+00
4GO:0016102: diterpenoid biosynthetic process0.00E+00
5GO:1902325: negative regulation of chlorophyll biosynthetic process0.00E+00
6GO:0010055: atrichoblast differentiation0.00E+00
7GO:0043201: response to leucine0.00E+00
8GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
9GO:0080052: response to histidine0.00E+00
10GO:0009423: chorismate biosynthetic process1.76E-05
11GO:0009753: response to jasmonic acid3.76E-05
12GO:0032491: detection of molecule of fungal origin6.91E-05
13GO:0009968: negative regulation of signal transduction6.91E-05
14GO:0032107: regulation of response to nutrient levels6.91E-05
15GO:0009820: alkaloid metabolic process6.91E-05
16GO:0010365: positive regulation of ethylene biosynthetic process6.91E-05
17GO:0043547: positive regulation of GTPase activity6.91E-05
18GO:0009073: aromatic amino acid family biosynthetic process8.80E-05
19GO:0009611: response to wounding1.18E-04
20GO:0042939: tripeptide transport1.66E-04
21GO:0071497: cellular response to freezing1.66E-04
22GO:0015802: basic amino acid transport1.66E-04
23GO:0019632: shikimate metabolic process1.66E-04
24GO:0002240: response to molecule of oomycetes origin1.66E-04
25GO:0006874: cellular calcium ion homeostasis2.16E-04
26GO:0016998: cell wall macromolecule catabolic process2.38E-04
27GO:0009737: response to abscisic acid3.83E-04
28GO:0009413: response to flooding4.06E-04
29GO:0010116: positive regulation of abscisic acid biosynthetic process4.06E-04
30GO:0042938: dipeptide transport5.42E-04
31GO:0051365: cellular response to potassium ion starvation5.42E-04
32GO:0033356: UDP-L-arabinose metabolic process5.42E-04
33GO:0000304: response to singlet oxygen6.87E-04
34GO:0006564: L-serine biosynthetic process6.87E-04
35GO:0009164: nucleoside catabolic process6.87E-04
36GO:0002238: response to molecule of fungal origin8.40E-04
37GO:0010019: chloroplast-nucleus signaling pathway9.99E-04
38GO:1900057: positive regulation of leaf senescence1.17E-03
39GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.17E-03
40GO:1902074: response to salt1.17E-03
41GO:0080027: response to herbivore1.17E-03
42GO:0098869: cellular oxidant detoxification1.17E-03
43GO:0043090: amino acid import1.17E-03
44GO:0071669: plant-type cell wall organization or biogenesis1.17E-03
45GO:0050829: defense response to Gram-negative bacterium1.17E-03
46GO:0009850: auxin metabolic process1.34E-03
47GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.34E-03
48GO:0051707: response to other organism1.42E-03
49GO:0010204: defense response signaling pathway, resistance gene-independent1.53E-03
50GO:0009808: lignin metabolic process1.53E-03
51GO:0022900: electron transport chain1.53E-03
52GO:0007186: G-protein coupled receptor signaling pathway1.53E-03
53GO:0010497: plasmodesmata-mediated intercellular transport1.53E-03
54GO:0006754: ATP biosynthetic process1.73E-03
55GO:0006098: pentose-phosphate shunt1.73E-03
56GO:0009664: plant-type cell wall organization1.78E-03
57GO:2000280: regulation of root development1.93E-03
58GO:0009751: response to salicylic acid2.04E-03
59GO:0006857: oligopeptide transport2.04E-03
60GO:0006032: chitin catabolic process2.14E-03
61GO:0008152: metabolic process2.35E-03
62GO:0000272: polysaccharide catabolic process2.36E-03
63GO:0006913: nucleocytoplasmic transport2.36E-03
64GO:0009682: induced systemic resistance2.36E-03
65GO:0052544: defense response by callose deposition in cell wall2.36E-03
66GO:0009620: response to fungus2.46E-03
67GO:0009887: animal organ morphogenesis3.06E-03
68GO:0002237: response to molecule of bacterial origin3.06E-03
69GO:0000162: tryptophan biosynthetic process3.56E-03
70GO:0080147: root hair cell development3.81E-03
71GO:0003333: amino acid transmembrane transport4.35E-03
72GO:0048511: rhythmic process4.35E-03
73GO:0010150: leaf senescence4.62E-03
74GO:0010017: red or far-red light signaling pathway4.63E-03
75GO:0042127: regulation of cell proliferation5.20E-03
76GO:0008284: positive regulation of cell proliferation5.50E-03
77GO:0009617: response to bacterium5.51E-03
78GO:0015991: ATP hydrolysis coupled proton transport5.80E-03
79GO:0010182: sugar mediated signaling pathway6.11E-03
80GO:0009749: response to glucose6.74E-03
81GO:0009851: auxin biosynthetic process6.74E-03
82GO:0071554: cell wall organization or biogenesis7.07E-03
83GO:0009630: gravitropism7.40E-03
84GO:0019760: glucosinolate metabolic process8.08E-03
85GO:0051607: defense response to virus8.77E-03
86GO:0006952: defense response8.84E-03
87GO:0010029: regulation of seed germination9.50E-03
88GO:0042742: defense response to bacterium1.05E-02
89GO:0030244: cellulose biosynthetic process1.10E-02
90GO:0009832: plant-type cell wall biogenesis1.14E-02
91GO:0050832: defense response to fungus1.14E-02
92GO:0009407: toxin catabolic process1.18E-02
93GO:0048527: lateral root development1.22E-02
94GO:0006865: amino acid transport1.26E-02
95GO:0008283: cell proliferation1.56E-02
96GO:0009636: response to toxic substance1.69E-02
97GO:0042538: hyperosmotic salinity response1.83E-02
98GO:0009809: lignin biosynthetic process1.92E-02
99GO:0009735: response to cytokinin2.13E-02
100GO:0009416: response to light stimulus2.33E-02
101GO:0042545: cell wall modification2.42E-02
102GO:0007275: multicellular organism development2.46E-02
103GO:0009058: biosynthetic process3.01E-02
104GO:0042744: hydrogen peroxide catabolic process3.18E-02
105GO:0016310: phosphorylation3.25E-02
106GO:0040008: regulation of growth3.53E-02
107GO:0045490: pectin catabolic process3.65E-02
108GO:0006470: protein dephosphorylation4.01E-02
109GO:0007166: cell surface receptor signaling pathway4.01E-02
110GO:0006508: proteolysis4.28E-02
111GO:0009414: response to water deprivation4.58E-02
112GO:0006468: protein phosphorylation4.68E-02
113GO:0006979: response to oxidative stress4.73E-02
114GO:0009651: response to salt stress4.76E-02
RankGO TermAdjusted P value
1GO:0003855: 3-dehydroquinate dehydratase activity0.00E+00
2GO:0003856: 3-dehydroquinate synthase activity0.00E+00
3GO:0004764: shikimate 3-dehydrogenase (NADP+) activity0.00E+00
4GO:0080013: (E,E)-geranyllinalool synthase activity0.00E+00
5GO:0004930: G-protein coupled receptor activity4.77E-06
6GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H6.91E-05
7GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity6.91E-05
8GO:0046906: tetrapyrrole binding6.91E-05
9GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity6.91E-05
10GO:0033984: indole-3-glycerol-phosphate lyase activity6.91E-05
11GO:0008083: growth factor activity1.36E-04
12GO:0005217: intracellular ligand-gated ion channel activity1.54E-04
13GO:0004970: ionotropic glutamate receptor activity1.54E-04
14GO:0042937: tripeptide transporter activity1.66E-04
15GO:0052691: UDP-arabinopyranose mutase activity1.66E-04
16GO:0010178: IAA-amino acid conjugate hydrolase activity4.06E-04
17GO:0004834: tryptophan synthase activity5.42E-04
18GO:0042936: dipeptide transporter activity5.42E-04
19GO:0016866: intramolecular transferase activity5.42E-04
20GO:0008194: UDP-glycosyltransferase activity6.55E-04
21GO:0004656: procollagen-proline 4-dioxygenase activity9.99E-04
22GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides9.99E-04
23GO:0102425: myricetin 3-O-glucosyltransferase activity1.17E-03
24GO:0102360: daphnetin 3-O-glucosyltransferase activity1.17E-03
25GO:0047893: flavonol 3-O-glucosyltransferase activity1.34E-03
26GO:0015293: symporter activity1.59E-03
27GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism1.73E-03
28GO:0015171: amino acid transmembrane transporter activity2.10E-03
29GO:0004568: chitinase activity2.14E-03
30GO:0015198: oligopeptide transporter activity2.58E-03
31GO:0004022: alcohol dehydrogenase (NAD) activity2.82E-03
32GO:0016758: transferase activity, transferring hexosyl groups3.27E-03
33GO:0008061: chitin binding3.30E-03
34GO:0004867: serine-type endopeptidase inhibitor activity3.30E-03
35GO:0001046: core promoter sequence-specific DNA binding3.81E-03
36GO:0010333: terpene synthase activity4.35E-03
37GO:0035251: UDP-glucosyltransferase activity4.35E-03
38GO:0016760: cellulose synthase (UDP-forming) activity4.91E-03
39GO:0005199: structural constituent of cell wall6.11E-03
40GO:0000287: magnesium ion binding7.00E-03
41GO:0016788: hydrolase activity, acting on ester bonds7.27E-03
42GO:0016301: kinase activity7.97E-03
43GO:0008237: metallopeptidase activity8.42E-03
44GO:0016413: O-acetyltransferase activity8.77E-03
45GO:0004721: phosphoprotein phosphatase activity1.02E-02
46GO:0005096: GTPase activator activity1.14E-02
47GO:0030145: manganese ion binding1.22E-02
48GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.30E-02
49GO:0004712: protein serine/threonine/tyrosine kinase activity1.38E-02
50GO:0050661: NADP binding1.43E-02
51GO:0004364: glutathione transferase activity1.51E-02
52GO:0045330: aspartyl esterase activity2.07E-02
53GO:0045735: nutrient reservoir activity2.17E-02
54GO:0080043: quercetin 3-O-glucosyltransferase activity2.32E-02
55GO:0080044: quercetin 7-O-glucosyltransferase activity2.32E-02
56GO:0030599: pectinesterase activity2.37E-02
57GO:0022857: transmembrane transporter activity2.37E-02
58GO:0043565: sequence-specific DNA binding2.57E-02
59GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.96E-02
60GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.47E-02
61GO:0046910: pectinesterase inhibitor activity3.47E-02
62GO:0046872: metal ion binding4.00E-02
63GO:0004601: peroxidase activity4.97E-02
RankGO TermAdjusted P value
1GO:0000138: Golgi trans cisterna6.91E-05
2GO:0005794: Golgi apparatus9.81E-05
3GO:0009530: primary cell wall2.81E-04
4GO:0031965: nuclear membrane4.53E-04
5GO:0005576: extracellular region5.11E-04
6GO:0005886: plasma membrane1.42E-03
7GO:0005802: trans-Golgi network1.54E-03
8GO:0016021: integral component of membrane1.84E-03
9GO:0005768: endosome1.87E-03
10GO:0031307: integral component of mitochondrial outer membrane2.58E-03
11GO:0031012: extracellular matrix2.82E-03
12GO:0009505: plant-type cell wall3.09E-03
13GO:0030176: integral component of endoplasmic reticulum membrane3.30E-03
14GO:0005795: Golgi stack3.30E-03
15GO:0005741: mitochondrial outer membrane4.35E-03
16GO:0005618: cell wall4.92E-03
17GO:0071944: cell periphery7.73E-03
18GO:0009707: chloroplast outer membrane1.10E-02
19GO:0009570: chloroplast stroma1.18E-02
20GO:0009506: plasmodesma1.40E-02
21GO:0031902: late endosome membrane1.47E-02
22GO:0048046: apoplast1.55E-02
23GO:0016020: membrane1.73E-02
24GO:0005635: nuclear envelope2.02E-02
25GO:0016607: nuclear speck2.22E-02
26GO:0010008: endosome membrane2.22E-02
27GO:0009543: chloroplast thylakoid lumen2.90E-02
28GO:0005615: extracellular space3.95E-02
29GO:0046658: anchored component of plasma membrane4.45E-02
30GO:0005774: vacuolar membrane4.95E-02
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Gene type



Gene DE type