co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G57170

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090706: specification of plant organ position	0.00E+00
2	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
3	GO:0007638: mechanosensory behavior	0.00E+00
4	GO:0080127: fruit septum development	0.00E+00
5	GO:0042493: response to drug	0.00E+00
6	GO:0006399: tRNA metabolic process	0.00E+00
7	GO:0010027: thylakoid membrane organization	8.61E-05
8	GO:0010450: inflorescence meristem growth	1.06E-04
9	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.06E-04
10	GO:0000476: maturation of 4.5S rRNA	1.06E-04
11	GO:0000967: rRNA 5'-end processing	1.06E-04
12	GO:0015671: oxygen transport	1.06E-04
13	GO:0046167: glycerol-3-phosphate biosynthetic process	1.06E-04
14	GO:0043007: maintenance of rDNA	1.06E-04
15	GO:0034470: ncRNA processing	2.48E-04
16	GO:0006650: glycerophospholipid metabolic process	2.48E-04
17	GO:0018026: peptidyl-lysine monomethylation	2.48E-04
18	GO:0046168: glycerol-3-phosphate catabolic process	4.12E-04
19	GO:0009405: pathogenesis	4.12E-04
20	GO:0005977: glycogen metabolic process	4.12E-04
21	GO:0045165: cell fate commitment	4.12E-04
22	GO:0015979: photosynthesis	5.20E-04
23	GO:0007231: osmosensory signaling pathway	5.92E-04
24	GO:0006072: glycerol-3-phosphate metabolic process	5.92E-04
25	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	5.92E-04
26	GO:0009650: UV protection	5.92E-04
27	GO:0046739: transport of virus in multicellular host	5.92E-04
28	GO:2001141: regulation of RNA biosynthetic process	5.92E-04
29	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	5.92E-04
30	GO:0022622: root system development	7.86E-04
31	GO:0033500: carbohydrate homeostasis	7.86E-04
32	GO:0010021: amylopectin biosynthetic process	7.86E-04
33	GO:0032502: developmental process	8.94E-04
34	GO:0010158: abaxial cell fate specification	9.92E-04
35	GO:1902183: regulation of shoot apical meristem development	9.92E-04
36	GO:0042793: transcription from plastid promoter	1.21E-03
37	GO:0010190: cytochrome b6f complex assembly	1.21E-03
38	GO:0003006: developmental process involved in reproduction	1.21E-03
39	GO:0042549: photosystem II stabilization	1.21E-03
40	GO:1901259: chloroplast rRNA processing	1.45E-03
41	GO:0032880: regulation of protein localization	1.70E-03
42	GO:0009642: response to light intensity	1.97E-03
43	GO:0006605: protein targeting	1.97E-03
44	GO:0000105: histidine biosynthetic process	1.97E-03
45	GO:0009231: riboflavin biosynthetic process	1.97E-03
46	GO:0009658: chloroplast organization	2.00E-03
47	GO:0071482: cellular response to light stimulus	2.24E-03
48	GO:0010497: plasmodesmata-mediated intercellular transport	2.24E-03
49	GO:0017004: cytochrome complex assembly	2.24E-03
50	GO:0010093: specification of floral organ identity	2.24E-03
51	GO:0019432: triglyceride biosynthetic process	2.53E-03
52	GO:0048507: meristem development	2.53E-03
53	GO:2000024: regulation of leaf development	2.53E-03
54	GO:0010205: photoinhibition	2.84E-03
55	GO:0006816: calcium ion transport	3.47E-03
56	GO:0019684: photosynthesis, light reaction	3.47E-03
57	GO:0009089: lysine biosynthetic process via diaminopimelate	3.47E-03
58	GO:1903507: negative regulation of nucleic acid-templated transcription	3.47E-03
59	GO:0006352: DNA-templated transcription, initiation	3.47E-03
60	GO:0010582: floral meristem determinacy	3.81E-03
61	GO:2000012: regulation of auxin polar transport	4.16E-03
62	GO:0006281: DNA repair	4.31E-03
63	GO:0048467: gynoecium development	4.52E-03
64	GO:0009933: meristem structural organization	4.52E-03
65	GO:0019853: L-ascorbic acid biosynthetic process	4.88E-03
66	GO:0010030: positive regulation of seed germination	4.88E-03
67	GO:0070588: calcium ion transmembrane transport	4.88E-03
68	GO:0000162: tryptophan biosynthetic process	5.26E-03
69	GO:0009944: polarity specification of adaxial/abaxial axis	5.65E-03
70	GO:0019953: sexual reproduction	6.05E-03
71	GO:0019915: lipid storage	6.46E-03
72	GO:0048511: rhythmic process	6.46E-03
73	GO:2000022: regulation of jasmonic acid mediated signaling pathway	6.87E-03
74	GO:0006012: galactose metabolic process	7.30E-03
75	GO:0009411: response to UV	7.30E-03
76	GO:0071369: cellular response to ethylene stimulus	7.30E-03
77	GO:0006284: base-excision repair	7.74E-03
78	GO:0009306: protein secretion	7.74E-03
79	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.19E-03
80	GO:0008284: positive regulation of cell proliferation	8.19E-03
81	GO:0042631: cellular response to water deprivation	8.64E-03
82	GO:0010154: fruit development	9.10E-03
83	GO:0009958: positive gravitropism	9.10E-03
84	GO:0006520: cellular amino acid metabolic process	9.10E-03
85	GO:0042752: regulation of circadian rhythm	9.58E-03
86	GO:0005975: carbohydrate metabolic process	9.95E-03
87	GO:0019252: starch biosynthetic process	1.01E-02
88	GO:0008654: phospholipid biosynthetic process	1.01E-02
89	GO:0002229: defense response to oomycetes	1.06E-02
90	GO:0016311: dephosphorylation	1.59E-02
91	GO:0009817: defense response to fungus, incompatible interaction	1.65E-02
92	GO:0048527: lateral root development	1.83E-02
93	GO:0009867: jasmonic acid mediated signaling pathway	1.95E-02
94	GO:0009637: response to blue light	1.95E-02
95	GO:0006631: fatty acid metabolic process	2.21E-02
96	GO:0010114: response to red light	2.34E-02
97	GO:0031347: regulation of defense response	2.68E-02
98	GO:0009664: plant-type cell wall organization	2.75E-02
99	GO:0006364: rRNA processing	2.89E-02
100	GO:0009909: regulation of flower development	3.11E-02
101	GO:0009416: response to light stimulus	4.13E-02
102	GO:0009790: embryo development	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity	0.00E+00
2	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
3	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
4	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
5	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
6	GO:0080030: methyl indole-3-acetate esterase activity	2.49E-05
7	GO:0005344: oxygen transporter activity	1.06E-04
8	GO:0019156: isoamylase activity	2.48E-04
9	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	2.48E-04
10	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.11E-04
11	GO:0005528: FK506 binding	3.49E-04
12	GO:0090729: toxin activity	4.12E-04
13	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	4.12E-04
14	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	7.86E-04
15	GO:0004045: aminoacyl-tRNA hydrolase activity	7.86E-04
16	GO:0080032: methyl jasmonate esterase activity	7.86E-04
17	GO:0016987: sigma factor activity	7.86E-04
18	GO:0016279: protein-lysine N-methyltransferase activity	7.86E-04
19	GO:0001053: plastid sigma factor activity	7.86E-04
20	GO:0008725: DNA-3-methyladenine glycosylase activity	9.92E-04
21	GO:0042578: phosphoric ester hydrolase activity	1.21E-03
22	GO:0004556: alpha-amylase activity	1.21E-03
23	GO:0004462: lactoylglutathione lyase activity	1.21E-03
24	GO:0008195: phosphatidate phosphatase activity	1.45E-03
25	GO:0004033: aldo-keto reductase (NADP) activity	1.97E-03
26	GO:0003993: acid phosphatase activity	2.03E-03
27	GO:0016788: hydrolase activity, acting on ester bonds	2.05E-03
28	GO:0015020: glucuronosyltransferase activity	3.15E-03
29	GO:0005262: calcium channel activity	4.16E-03
30	GO:0008083: growth factor activity	4.52E-03
31	GO:0003714: transcription corepressor activity	5.65E-03
32	GO:0048038: quinone binding	1.06E-02
33	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.65E-02
34	GO:0005096: GTPase activator activity	1.71E-02
35	GO:0030145: manganese ion binding	1.83E-02
36	GO:0043621: protein self-association	2.47E-02
37	GO:0051287: NAD binding	2.68E-02
38	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.89E-02
39	GO:0045735: nutrient reservoir activity	3.26E-02
40	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.49E-02
41	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.49E-02
42	GO:0051082: unfolded protein binding	3.72E-02
43	GO:0008026: ATP-dependent helicase activity	3.88E-02
44	GO:0016758: transferase activity, transferring hexosyl groups	4.28E-02
45	GO:0016829: lyase activity	4.61E-02
46	GO:0004252: serine-type endopeptidase activity	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009349: riboflavin synthase complex	0.00E+00
3	GO:0009507: chloroplast	5.52E-13
4	GO:0000427: plastid-encoded plastid RNA polymerase complex	5.86E-07
5	GO:0042646: plastid nucleoid	5.26E-06
6	GO:0009535: chloroplast thylakoid membrane	1.12E-05
7	GO:0009543: chloroplast thylakoid lumen	8.15E-05
8	GO:0042644: chloroplast nucleoid	9.74E-05
9	GO:0009331: glycerol-3-phosphate dehydrogenase complex	5.92E-04
10	GO:0009531: secondary cell wall	5.92E-04
11	GO:0009570: chloroplast stroma	1.21E-03
12	GO:0016272: prefoldin complex	1.45E-03
13	GO:0009533: chloroplast stromal thylakoid	1.70E-03
14	GO:0009538: photosystem I reaction center	1.97E-03
15	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.53E-03
16	GO:0055028: cortical microtubule	3.15E-03
17	GO:0012511: monolayer-surrounded lipid storage body	3.47E-03
18	GO:0009508: plastid chromosome	4.16E-03
19	GO:0030095: chloroplast photosystem II	4.52E-03
20	GO:0009654: photosystem II oxygen evolving complex	6.05E-03
21	GO:0009523: photosystem II	1.01E-02
22	GO:0019898: extrinsic component of membrane	1.01E-02
23	GO:0016592: mediator complex	1.11E-02
24	GO:0009579: thylakoid	1.12E-02
25	GO:0009534: chloroplast thylakoid	1.13E-02
26	GO:0009295: nucleoid	1.26E-02
27	GO:0030529: intracellular ribonucleoprotein complex	1.37E-02
28	GO:0005887: integral component of plasma membrane	3.17E-02
29	GO:0009706: chloroplast inner membrane	3.72E-02
30	GO:0010287: plastoglobule	4.20E-02