GO Enrichment Analysis of Co-expressed Genes with
AT5G56660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009236: cobalamin biosynthetic process | 0.00E+00 |
| 2 | GO:0001881: receptor recycling | 0.00E+00 |
| 3 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 4 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 5 | GO:0006721: terpenoid metabolic process | 0.00E+00 |
| 6 | GO:0019354: siroheme biosynthetic process | 3.25E-05 |
| 7 | GO:0016487: farnesol metabolic process | 3.25E-05 |
| 8 | GO:0006432: phenylalanyl-tRNA aminoacylation | 8.18E-05 |
| 9 | GO:0097054: L-glutamate biosynthetic process | 8.18E-05 |
| 10 | GO:0015940: pantothenate biosynthetic process | 1.42E-04 |
| 11 | GO:0045793: positive regulation of cell size | 1.42E-04 |
| 12 | GO:0006760: folic acid-containing compound metabolic process | 1.42E-04 |
| 13 | GO:0008333: endosome to lysosome transport | 1.42E-04 |
| 14 | GO:0006537: glutamate biosynthetic process | 2.11E-04 |
| 15 | GO:1901332: negative regulation of lateral root development | 2.11E-04 |
| 16 | GO:0032877: positive regulation of DNA endoreduplication | 2.11E-04 |
| 17 | GO:0006624: vacuolar protein processing | 2.11E-04 |
| 18 | GO:0006107: oxaloacetate metabolic process | 2.11E-04 |
| 19 | GO:0044205: 'de novo' UMP biosynthetic process | 2.85E-04 |
| 20 | GO:0019676: ammonia assimilation cycle | 2.85E-04 |
| 21 | GO:0015976: carbon utilization | 2.85E-04 |
| 22 | GO:0051781: positive regulation of cell division | 2.85E-04 |
| 23 | GO:0006221: pyrimidine nucleotide biosynthetic process | 2.85E-04 |
| 24 | GO:0006749: glutathione metabolic process | 2.85E-04 |
| 25 | GO:0036065: fucosylation | 3.65E-04 |
| 26 | GO:0006796: phosphate-containing compound metabolic process | 4.48E-04 |
| 27 | GO:0006014: D-ribose metabolic process | 4.48E-04 |
| 28 | GO:0009751: response to salicylic acid | 6.04E-04 |
| 29 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 6.27E-04 |
| 30 | GO:0000028: ribosomal small subunit assembly | 7.22E-04 |
| 31 | GO:0006526: arginine biosynthetic process | 8.20E-04 |
| 32 | GO:0006108: malate metabolic process | 1.47E-03 |
| 33 | GO:0006807: nitrogen compound metabolic process | 1.47E-03 |
| 34 | GO:0007034: vacuolar transport | 1.60E-03 |
| 35 | GO:0006071: glycerol metabolic process | 1.85E-03 |
| 36 | GO:0006487: protein N-linked glycosylation | 1.99E-03 |
| 37 | GO:0019953: sexual reproduction | 2.12E-03 |
| 38 | GO:0019915: lipid storage | 2.26E-03 |
| 39 | GO:0009826: unidimensional cell growth | 2.62E-03 |
| 40 | GO:0006508: proteolysis | 2.68E-03 |
| 41 | GO:0042147: retrograde transport, endosome to Golgi | 2.84E-03 |
| 42 | GO:0006623: protein targeting to vacuole | 3.47E-03 |
| 43 | GO:0009828: plant-type cell wall loosening | 4.14E-03 |
| 44 | GO:0000910: cytokinesis | 4.49E-03 |
| 45 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 4.85E-03 |
| 46 | GO:0010311: lateral root formation | 5.80E-03 |
| 47 | GO:0009407: toxin catabolic process | 5.99E-03 |
| 48 | GO:0045087: innate immune response | 6.60E-03 |
| 49 | GO:0009853: photorespiration | 6.60E-03 |
| 50 | GO:0009636: response to toxic substance | 8.53E-03 |
| 51 | GO:0051603: proteolysis involved in cellular protein catabolic process | 9.93E-03 |
| 52 | GO:0055114: oxidation-reduction process | 1.01E-02 |
| 53 | GO:0071555: cell wall organization | 1.78E-02 |
| 54 | GO:0006979: response to oxidative stress | 1.79E-02 |
| 55 | GO:0010150: leaf senescence | 1.83E-02 |
| 56 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.89E-02 |
| 57 | GO:0009723: response to ethylene | 2.77E-02 |
| 58 | GO:0080167: response to karrikin | 2.91E-02 |
| 59 | GO:0044550: secondary metabolite biosynthetic process | 3.09E-02 |
| 60 | GO:0045454: cell redox homeostasis | 3.31E-02 |
| 61 | GO:0045892: negative regulation of transcription, DNA-templated | 3.34E-02 |
| 62 | GO:0032259: methylation | 3.72E-02 |
| 63 | GO:0016042: lipid catabolic process | 3.76E-02 |
| 64 | GO:0006629: lipid metabolic process | 3.84E-02 |
| 65 | GO:0006281: DNA repair | 3.84E-02 |
| 66 | GO:0009753: response to jasmonic acid | 4.04E-02 |
| 67 | GO:0009734: auxin-activated signaling pathway | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015930: glutamate synthase activity | 0.00E+00 |
| 2 | GO:0047886: farnesol dehydrogenase activity | 0.00E+00 |
| 3 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 4 | GO:0016852: sirohydrochlorin cobaltochelatase activity | 0.00E+00 |
| 5 | GO:0050152: omega-amidase activity | 0.00E+00 |
| 6 | GO:0017083: 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity | 0.00E+00 |
| 7 | GO:0051266: sirohydrochlorin ferrochelatase activity | 0.00E+00 |
| 8 | GO:0004151: dihydroorotase activity | 0.00E+00 |
| 9 | GO:0016041: glutamate synthase (ferredoxin) activity | 3.25E-05 |
| 10 | GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | 3.25E-05 |
| 11 | GO:0046920: alpha-(1->3)-fucosyltransferase activity | 3.25E-05 |
| 12 | GO:0004089: carbonate dehydratase activity | 3.93E-05 |
| 13 | GO:0004826: phenylalanine-tRNA ligase activity | 8.18E-05 |
| 14 | GO:0052692: raffinose alpha-galactosidase activity | 1.42E-04 |
| 15 | GO:0004557: alpha-galactosidase activity | 1.42E-04 |
| 16 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 2.85E-04 |
| 17 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 2.85E-04 |
| 18 | GO:0010011: auxin binding | 2.85E-04 |
| 19 | GO:0051538: 3 iron, 4 sulfur cluster binding | 3.65E-04 |
| 20 | GO:0004602: glutathione peroxidase activity | 5.36E-04 |
| 21 | GO:0004747: ribokinase activity | 5.36E-04 |
| 22 | GO:0042162: telomeric DNA binding | 6.27E-04 |
| 23 | GO:0004427: inorganic diphosphatase activity | 6.27E-04 |
| 24 | GO:0008417: fucosyltransferase activity | 9.20E-04 |
| 25 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 9.20E-04 |
| 26 | GO:0008559: xenobiotic-transporting ATPase activity | 1.24E-03 |
| 27 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.24E-03 |
| 28 | GO:0000049: tRNA binding | 1.36E-03 |
| 29 | GO:0004175: endopeptidase activity | 1.60E-03 |
| 30 | GO:0051536: iron-sulfur cluster binding | 1.99E-03 |
| 31 | GO:0050662: coenzyme binding | 3.31E-03 |
| 32 | GO:0004872: receptor activity | 3.47E-03 |
| 33 | GO:0004197: cysteine-type endopeptidase activity | 3.80E-03 |
| 34 | GO:0008237: metallopeptidase activity | 4.32E-03 |
| 35 | GO:0046872: metal ion binding | 4.78E-03 |
| 36 | GO:0008236: serine-type peptidase activity | 5.41E-03 |
| 37 | GO:0050897: cobalt ion binding | 6.19E-03 |
| 38 | GO:0003697: single-stranded DNA binding | 6.60E-03 |
| 39 | GO:0051539: 4 iron, 4 sulfur cluster binding | 7.22E-03 |
| 40 | GO:0004364: glutathione transferase activity | 7.65E-03 |
| 41 | GO:0004185: serine-type carboxypeptidase activity | 7.87E-03 |
| 42 | GO:0008234: cysteine-type peptidase activity | 1.04E-02 |
| 43 | GO:0015035: protein disulfide oxidoreductase activity | 1.27E-02 |
| 44 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.17E-02 |
| 45 | GO:0042802: identical protein binding | 2.17E-02 |
| 46 | GO:0008168: methyltransferase activity | 2.43E-02 |
| 47 | GO:0000287: magnesium ion binding | 2.46E-02 |
| 48 | GO:0004601: peroxidase activity | 2.50E-02 |
| 49 | GO:0016788: hydrolase activity, acting on ester bonds | 2.53E-02 |
| 50 | GO:0020037: heme binding | 2.81E-02 |
| 51 | GO:0052689: carboxylic ester hydrolase activity | 3.12E-02 |
| 52 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.49E-02 |
| 53 | GO:0004722: protein serine/threonine phosphatase activity | 3.53E-02 |
| 54 | GO:0009055: electron carrier activity | 4.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005697: telomerase holoenzyme complex | 8.18E-05 |
| 2 | GO:0000323: lytic vacuole | 2.11E-04 |
| 3 | GO:0005771: multivesicular body | 4.48E-04 |
| 4 | GO:0030904: retromer complex | 4.48E-04 |
| 5 | GO:0005763: mitochondrial small ribosomal subunit | 9.20E-04 |
| 6 | GO:0009508: plastid chromosome | 1.47E-03 |
| 7 | GO:0005764: lysosome | 1.60E-03 |
| 8 | GO:0045271: respiratory chain complex I | 2.12E-03 |
| 9 | GO:0032580: Golgi cisterna membrane | 4.14E-03 |
| 10 | GO:0009295: nucleoid | 4.32E-03 |
| 11 | GO:0005829: cytosol | 4.75E-03 |
| 12 | GO:0005788: endoplasmic reticulum lumen | 4.85E-03 |
| 13 | GO:0005773: vacuole | 6.15E-03 |
| 14 | GO:0000325: plant-type vacuole | 6.19E-03 |
| 15 | GO:0031902: late endosome membrane | 7.43E-03 |
| 16 | GO:0031966: mitochondrial membrane | 9.22E-03 |
| 17 | GO:0005747: mitochondrial respiratory chain complex I | 1.11E-02 |
| 18 | GO:0009507: chloroplast | 1.36E-02 |
| 19 | GO:0005783: endoplasmic reticulum | 3.52E-02 |
| 20 | GO:0043231: intracellular membrane-bounded organelle | 4.12E-02 |