GO Enrichment Analysis of Co-expressed Genes with
AT5G56030
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019481: L-alanine catabolic process, by transamination | 0.00E+00 |
| 2 | GO:0043462: regulation of ATPase activity | 0.00E+00 |
| 3 | GO:0009408: response to heat | 5.61E-19 |
| 4 | GO:0006457: protein folding | 2.72E-10 |
| 5 | GO:0046686: response to cadmium ion | 6.82E-10 |
| 6 | GO:0010372: positive regulation of gibberellin biosynthetic process | 1.17E-07 |
| 7 | GO:0009615: response to virus | 2.04E-07 |
| 8 | GO:0009845: seed germination | 9.10E-06 |
| 9 | GO:0006744: ubiquinone biosynthetic process | 1.13E-05 |
| 10 | GO:0006402: mRNA catabolic process | 1.51E-05 |
| 11 | GO:0009699: phenylpropanoid biosynthetic process | 1.95E-05 |
| 12 | GO:0051014: actin filament severing | 4.31E-05 |
| 13 | GO:0071277: cellular response to calcium ion | 4.31E-05 |
| 14 | GO:0018920: glyphosate metabolic process | 4.31E-05 |
| 15 | GO:0099636: cytoplasmic streaming | 4.31E-05 |
| 16 | GO:0009073: aromatic amino acid family biosynthetic process | 4.36E-05 |
| 17 | GO:0034605: cellular response to heat | 6.90E-05 |
| 18 | GO:0009805: coumarin biosynthetic process | 1.07E-04 |
| 19 | GO:0061077: chaperone-mediated protein folding | 1.24E-04 |
| 20 | GO:0009306: protein secretion | 1.66E-04 |
| 21 | GO:0070475: rRNA base methylation | 1.84E-04 |
| 22 | GO:0051131: chaperone-mediated protein complex assembly | 2.70E-04 |
| 23 | GO:0031047: gene silencing by RNA | 2.83E-04 |
| 24 | GO:1902347: response to strigolactone | 3.64E-04 |
| 25 | GO:0033320: UDP-D-xylose biosynthetic process | 3.64E-04 |
| 26 | GO:0051764: actin crosslink formation | 3.64E-04 |
| 27 | GO:0033365: protein localization to organelle | 5.67E-04 |
| 28 | GO:0000470: maturation of LSU-rRNA | 5.67E-04 |
| 29 | GO:0042732: D-xylose metabolic process | 5.67E-04 |
| 30 | GO:0080167: response to karrikin | 5.97E-04 |
| 31 | GO:0009423: chorismate biosynthetic process | 6.76E-04 |
| 32 | GO:0070370: cellular heat acclimation | 7.90E-04 |
| 33 | GO:0051693: actin filament capping | 7.90E-04 |
| 34 | GO:0048658: anther wall tapetum development | 9.08E-04 |
| 35 | GO:0017004: cytochrome complex assembly | 1.03E-03 |
| 36 | GO:0009808: lignin metabolic process | 1.03E-03 |
| 37 | GO:0010208: pollen wall assembly | 1.03E-03 |
| 38 | GO:0015996: chlorophyll catabolic process | 1.03E-03 |
| 39 | GO:0046685: response to arsenic-containing substance | 1.16E-03 |
| 40 | GO:0090332: stomatal closure | 1.29E-03 |
| 41 | GO:0030042: actin filament depolymerization | 1.29E-03 |
| 42 | GO:0019538: protein metabolic process | 1.43E-03 |
| 43 | GO:0045036: protein targeting to chloroplast | 1.43E-03 |
| 44 | GO:0009698: phenylpropanoid metabolic process | 1.57E-03 |
| 45 | GO:0010015: root morphogenesis | 1.57E-03 |
| 46 | GO:0000266: mitochondrial fission | 1.72E-03 |
| 47 | GO:0007015: actin filament organization | 2.03E-03 |
| 48 | GO:0006446: regulation of translational initiation | 2.03E-03 |
| 49 | GO:0009266: response to temperature stimulus | 2.03E-03 |
| 50 | GO:0090351: seedling development | 2.19E-03 |
| 51 | GO:0009225: nucleotide-sugar metabolic process | 2.19E-03 |
| 52 | GO:0007010: cytoskeleton organization | 2.52E-03 |
| 53 | GO:0010187: negative regulation of seed germination | 2.52E-03 |
| 54 | GO:0051017: actin filament bundle assembly | 2.52E-03 |
| 55 | GO:0098542: defense response to other organism | 2.88E-03 |
| 56 | GO:0009617: response to bacterium | 3.00E-03 |
| 57 | GO:0009686: gibberellin biosynthetic process | 3.24E-03 |
| 58 | GO:0040007: growth | 3.24E-03 |
| 59 | GO:0042742: defense response to bacterium | 4.79E-03 |
| 60 | GO:0032502: developmental process | 4.86E-03 |
| 61 | GO:0010090: trichome morphogenesis | 5.07E-03 |
| 62 | GO:0009651: response to salt stress | 5.36E-03 |
| 63 | GO:0009911: positive regulation of flower development | 5.98E-03 |
| 64 | GO:0001666: response to hypoxia | 5.98E-03 |
| 65 | GO:0009816: defense response to bacterium, incompatible interaction | 6.21E-03 |
| 66 | GO:0048573: photoperiodism, flowering | 6.69E-03 |
| 67 | GO:0006397: mRNA processing | 7.39E-03 |
| 68 | GO:0048767: root hair elongation | 7.43E-03 |
| 69 | GO:0009813: flavonoid biosynthetic process | 7.43E-03 |
| 70 | GO:0045087: innate immune response | 8.47E-03 |
| 71 | GO:0016051: carbohydrate biosynthetic process | 8.47E-03 |
| 72 | GO:0042542: response to hydrogen peroxide | 9.83E-03 |
| 73 | GO:0008283: cell proliferation | 1.01E-02 |
| 74 | GO:0009644: response to high light intensity | 1.07E-02 |
| 75 | GO:0009965: leaf morphogenesis | 1.10E-02 |
| 76 | GO:0009809: lignin biosynthetic process | 1.25E-02 |
| 77 | GO:0006364: rRNA processing | 1.25E-02 |
| 78 | GO:0006486: protein glycosylation | 1.25E-02 |
| 79 | GO:0009555: pollen development | 1.26E-02 |
| 80 | GO:0010224: response to UV-B | 1.28E-02 |
| 81 | GO:0009611: response to wounding | 1.29E-02 |
| 82 | GO:0009624: response to nematode | 1.60E-02 |
| 83 | GO:0006396: RNA processing | 1.64E-02 |
| 84 | GO:0006413: translational initiation | 2.25E-02 |
| 85 | GO:0007623: circadian rhythm | 2.36E-02 |
| 86 | GO:0006970: response to osmotic stress | 3.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016710: trans-cinnamate 4-monooxygenase activity | 0.00E+00 |
| 2 | GO:0046409: p-coumarate 3-hydroxylase activity | 0.00E+00 |
| 3 | GO:0005524: ATP binding | 9.18E-09 |
| 4 | GO:0051082: unfolded protein binding | 1.10E-07 |
| 5 | GO:0002020: protease binding | 3.64E-06 |
| 6 | GO:0080025: phosphatidylinositol-3,5-bisphosphate binding | 4.31E-05 |
| 7 | GO:0030544: Hsp70 protein binding | 4.31E-05 |
| 8 | GO:0032266: phosphatidylinositol-3-phosphate binding | 4.31E-05 |
| 9 | GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity | 4.31E-05 |
| 10 | GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity | 4.31E-05 |
| 11 | GO:0031072: heat shock protein binding | 5.98E-05 |
| 12 | GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity | 1.07E-04 |
| 13 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 2.70E-04 |
| 14 | GO:0004518: nuclease activity | 2.83E-04 |
| 15 | GO:0048040: UDP-glucuronate decarboxylase activity | 5.67E-04 |
| 16 | GO:0005515: protein binding | 5.71E-04 |
| 17 | GO:0004012: phospholipid-translocating ATPase activity | 6.76E-04 |
| 18 | GO:0070403: NAD+ binding | 6.76E-04 |
| 19 | GO:0003729: mRNA binding | 1.56E-03 |
| 20 | GO:0008378: galactosyltransferase activity | 1.72E-03 |
| 21 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.87E-03 |
| 22 | GO:0005528: FK506 binding | 2.52E-03 |
| 23 | GO:0042802: identical protein binding | 3.20E-03 |
| 24 | GO:0001085: RNA polymerase II transcription factor binding | 4.02E-03 |
| 25 | GO:0003682: chromatin binding | 4.10E-03 |
| 26 | GO:0051015: actin filament binding | 5.07E-03 |
| 27 | GO:0008375: acetylglucosaminyltransferase activity | 6.45E-03 |
| 28 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 7.95E-03 |
| 29 | GO:0043621: protein self-association | 1.07E-02 |
| 30 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.13E-02 |
| 31 | GO:0031625: ubiquitin protein ligase binding | 1.34E-02 |
| 32 | GO:0003779: actin binding | 1.57E-02 |
| 33 | GO:0008026: ATP-dependent helicase activity | 1.67E-02 |
| 34 | GO:0016758: transferase activity, transferring hexosyl groups | 1.84E-02 |
| 35 | GO:0005516: calmodulin binding | 1.90E-02 |
| 36 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.06E-02 |
| 37 | GO:0005506: iron ion binding | 2.52E-02 |
| 38 | GO:0003743: translation initiation factor activity | 2.64E-02 |
| 39 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.80E-02 |
| 40 | GO:0005215: transporter activity | 2.83E-02 |
| 41 | GO:0003676: nucleic acid binding | 2.87E-02 |
| 42 | GO:0000287: magnesium ion binding | 3.18E-02 |
| 43 | GO:0004497: monooxygenase activity | 3.76E-02 |
| 44 | GO:0020037: heme binding | 4.02E-02 |
| 45 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 4.27E-02 |
| 46 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 4.51E-02 |
| 47 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016442: RISC complex | 0.00E+00 |
| 2 | GO:0005829: cytosol | 1.81E-06 |
| 3 | GO:0005886: plasma membrane | 3.03E-06 |
| 4 | GO:0010494: cytoplasmic stress granule | 2.46E-05 |
| 5 | GO:0005794: Golgi apparatus | 3.99E-05 |
| 6 | GO:0030688: preribosome, small subunit precursor | 4.31E-05 |
| 7 | GO:0048471: perinuclear region of cytoplasm | 4.36E-05 |
| 8 | GO:0005730: nucleolus | 5.29E-05 |
| 9 | GO:0005618: cell wall | 6.61E-05 |
| 10 | GO:0000932: P-body | 3.84E-04 |
| 11 | GO:0005746: mitochondrial respiratory chain | 4.63E-04 |
| 12 | GO:0016363: nuclear matrix | 6.76E-04 |
| 13 | GO:0005635: nuclear envelope | 1.13E-03 |
| 14 | GO:0009506: plasmodesma | 1.19E-03 |
| 15 | GO:0005774: vacuolar membrane | 1.30E-03 |
| 16 | GO:0005884: actin filament | 1.57E-03 |
| 17 | GO:0005623: cell | 1.89E-03 |
| 18 | GO:0009532: plastid stroma | 2.88E-03 |
| 19 | GO:0005741: mitochondrial outer membrane | 2.88E-03 |
| 20 | GO:0005783: endoplasmic reticulum | 4.44E-03 |
| 21 | GO:0071944: cell periphery | 5.07E-03 |
| 22 | GO:0032580: Golgi cisterna membrane | 5.30E-03 |
| 23 | GO:0048046: apoplast | 6.06E-03 |
| 24 | GO:0005667: transcription factor complex | 6.45E-03 |
| 25 | GO:0031902: late endosome membrane | 9.56E-03 |
| 26 | GO:0005856: cytoskeleton | 1.10E-02 |
| 27 | GO:0022626: cytosolic ribosome | 1.20E-02 |
| 28 | GO:0005737: cytoplasm | 1.23E-02 |
| 29 | GO:0005802: trans-Golgi network | 2.02E-02 |
| 30 | GO:0005622: intracellular | 2.24E-02 |
| 31 | GO:0005768: endosome | 2.30E-02 |
| 32 | GO:0005789: endoplasmic reticulum membrane | 3.90E-02 |
| 33 | GO:0005743: mitochondrial inner membrane | 4.71E-02 |