co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G55930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032497: detection of lipopolysaccharide	0.00E+00
2	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
3	GO:0032499: detection of peptidoglycan	0.00E+00
4	GO:2001143: N-methylnicotinate transport	0.00E+00
5	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
6	GO:1903086: negative regulation of sinapate ester biosynthetic process	0.00E+00
7	GO:0006862: nucleotide transport	0.00E+00
8	GO:2001142: nicotinate transport	0.00E+00
9	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
10	GO:0010200: response to chitin	5.15E-09
11	GO:0006468: protein phosphorylation	1.12E-06
12	GO:0002679: respiratory burst involved in defense response	1.14E-05
13	GO:1902347: response to strigolactone	2.11E-05
14	GO:0007166: cell surface receptor signaling pathway	5.99E-05
15	GO:0048544: recognition of pollen	9.80E-05
16	GO:0051180: vitamin transport	1.64E-04
17	GO:0030974: thiamine pyrophosphate transport	1.64E-04
18	GO:0032491: detection of molecule of fungal origin	1.64E-04
19	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	1.64E-04
20	GO:0009966: regulation of signal transduction	1.64E-04
21	GO:0051865: protein autoubiquitination	1.87E-04
22	GO:0019538: protein metabolic process	2.65E-04
23	GO:0046939: nucleotide phosphorylation	3.73E-04
24	GO:0010155: regulation of proton transport	3.73E-04
25	GO:0010372: positive regulation of gibberellin biosynthetic process	3.73E-04
26	GO:0015893: drug transport	3.73E-04
27	GO:0051176: positive regulation of sulfur metabolic process	6.11E-04
28	GO:0070475: rRNA base methylation	6.11E-04
29	GO:0006598: polyamine catabolic process	6.11E-04
30	GO:0046686: response to cadmium ion	6.26E-04
31	GO:0016226: iron-sulfur cluster assembly	8.26E-04
32	GO:0033014: tetrapyrrole biosynthetic process	8.73E-04
33	GO:0015696: ammonium transport	8.73E-04
34	GO:0071323: cellular response to chitin	8.73E-04
35	GO:0043207: response to external biotic stimulus	8.73E-04
36	GO:0030100: regulation of endocytosis	8.73E-04
37	GO:0009399: nitrogen fixation	8.73E-04
38	GO:0009686: gibberellin biosynthetic process	8.97E-04
39	GO:0042742: defense response to bacterium	9.33E-04
40	GO:0010107: potassium ion import	1.16E-03
41	GO:0071219: cellular response to molecule of bacterial origin	1.16E-03
42	GO:0033320: UDP-D-xylose biosynthetic process	1.16E-03
43	GO:0072488: ammonium transmembrane transport	1.16E-03
44	GO:0046777: protein autophosphorylation	1.17E-03
45	GO:0006952: defense response	1.24E-03
46	GO:2000762: regulation of phenylpropanoid metabolic process	1.47E-03
47	GO:0009435: NAD biosynthetic process	1.47E-03
48	GO:0009164: nucleoside catabolic process	1.47E-03
49	GO:0045487: gibberellin catabolic process	1.47E-03
50	GO:0006796: phosphate-containing compound metabolic process	1.80E-03
51	GO:0010337: regulation of salicylic acid metabolic process	1.80E-03
52	GO:0006014: D-ribose metabolic process	1.80E-03
53	GO:0000470: maturation of LSU-rRNA	1.80E-03
54	GO:0042732: D-xylose metabolic process	1.80E-03
55	GO:0009845: seed germination	1.82E-03
56	GO:0098655: cation transmembrane transport	2.17E-03
57	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.17E-03
58	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.26E-03
59	GO:0006955: immune response	2.55E-03
60	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	2.55E-03
61	GO:0008219: cell death	2.78E-03
62	GO:0006402: mRNA catabolic process	2.95E-03
63	GO:0045010: actin nucleation	2.95E-03
64	GO:0048658: anther wall tapetum development	2.95E-03
65	GO:1900150: regulation of defense response to fungus	2.95E-03
66	GO:0009932: cell tip growth	3.37E-03
67	GO:0045087: innate immune response	3.52E-03
68	GO:0006783: heme biosynthetic process	3.81E-03
69	GO:0009060: aerobic respiration	3.81E-03
70	GO:0098656: anion transmembrane transport	3.81E-03
71	GO:0046685: response to arsenic-containing substance	3.81E-03
72	GO:0006839: mitochondrial transport	4.01E-03
73	GO:0009737: response to abscisic acid	4.15E-03
74	GO:0008202: steroid metabolic process	4.27E-03
75	GO:0071577: zinc II ion transmembrane transport	4.27E-03
76	GO:0006779: porphyrin-containing compound biosynthetic process	4.27E-03
77	GO:0006970: response to osmotic stress	4.73E-03
78	GO:0048829: root cap development	4.75E-03
79	GO:0006782: protoporphyrinogen IX biosynthetic process	4.75E-03
80	GO:0035556: intracellular signal transduction	4.96E-03
81	GO:0010015: root morphogenesis	5.25E-03
82	GO:0016310: phosphorylation	5.46E-03
83	GO:0055046: microgametogenesis	6.30E-03
84	GO:0010224: response to UV-B	6.31E-03
85	GO:0034605: cellular response to heat	6.85E-03
86	GO:0071732: cellular response to nitric oxide	7.41E-03
87	GO:0090351: seedling development	7.41E-03
88	GO:0009225: nucleotide-sugar metabolic process	7.41E-03
89	GO:0009620: response to fungus	7.93E-03
90	GO:0009863: salicylic acid mediated signaling pathway	8.59E-03
91	GO:0009624: response to nematode	8.68E-03
92	GO:0009742: brassinosteroid mediated signaling pathway	9.21E-03
93	GO:0009695: jasmonic acid biosynthetic process	9.21E-03
94	GO:0098542: defense response to other organism	9.84E-03
95	GO:0061077: chaperone-mediated protein folding	9.84E-03
96	GO:0030433: ubiquitin-dependent ERAD pathway	1.05E-02
97	GO:0030245: cellulose catabolic process	1.05E-02
98	GO:0071369: cellular response to ethylene stimulus	1.11E-02
99	GO:0071215: cellular response to abscisic acid stimulus	1.11E-02
100	GO:0006817: phosphate ion transport	1.18E-02
101	GO:0009306: protein secretion	1.18E-02
102	GO:0010089: xylem development	1.18E-02
103	GO:0019722: calcium-mediated signaling	1.18E-02
104	GO:0009414: response to water deprivation	1.28E-02
105	GO:0010118: stomatal movement	1.32E-02
106	GO:0042631: cellular response to water deprivation	1.32E-02
107	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.33E-02
108	GO:0006979: response to oxidative stress	1.34E-02
109	GO:0009749: response to glucose	1.54E-02
110	GO:0019252: starch biosynthetic process	1.54E-02
111	GO:0002229: defense response to oomycetes	1.62E-02
112	GO:0031047: gene silencing by RNA	1.70E-02
113	GO:1901657: glycosyl compound metabolic process	1.77E-02
114	GO:0071281: cellular response to iron ion	1.77E-02
115	GO:0010090: trichome morphogenesis	1.77E-02
116	GO:0009617: response to bacterium	1.80E-02
117	GO:0009738: abscisic acid-activated signaling pathway	1.85E-02
118	GO:0009639: response to red or far red light	1.86E-02
119	GO:0006904: vesicle docking involved in exocytosis	1.94E-02
120	GO:0009611: response to wounding	1.98E-02
121	GO:0001666: response to hypoxia	2.10E-02
122	GO:0009615: response to virus	2.10E-02
123	GO:0009816: defense response to bacterium, incompatible interaction	2.19E-02
124	GO:0048573: photoperiodism, flowering	2.36E-02
125	GO:0015995: chlorophyll biosynthetic process	2.36E-02
126	GO:0016049: cell growth	2.45E-02
127	GO:0009817: defense response to fungus, incompatible interaction	2.54E-02
128	GO:0010311: lateral root formation	2.63E-02
129	GO:0009651: response to salt stress	2.88E-02
130	GO:0080167: response to karrikin	2.89E-02
131	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.99E-02
132	GO:0016051: carbohydrate biosynthetic process	3.01E-02
133	GO:0009637: response to blue light	3.01E-02
134	GO:0006887: exocytosis	3.40E-02
135	GO:0006897: endocytosis	3.40E-02
136	GO:0008283: cell proliferation	3.60E-02
137	GO:0009965: leaf morphogenesis	3.91E-02
138	GO:0006812: cation transport	4.23E-02
139	GO:0009408: response to heat	4.26E-02
140	GO:0006397: mRNA processing	4.44E-02
141	GO:0009753: response to jasmonic acid	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
3	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
4	GO:0090416: nicotinate transporter activity	0.00E+00
5	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
6	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
7	GO:0008987: quinolinate synthetase A activity	0.00E+00
8	GO:0005522: profilin binding	0.00E+00
9	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
10	GO:0016301: kinase activity	3.65E-08
11	GO:0005524: ATP binding	8.31E-07
12	GO:0004672: protein kinase activity	2.32E-05
13	GO:0047631: ADP-ribose diphosphatase activity	3.42E-05
14	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.79E-05
15	GO:0004674: protein serine/threonine kinase activity	7.90E-05
16	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.64E-04
17	GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity	1.64E-04
18	GO:0052894: norspermine:oxygen oxidoreductase activity	1.64E-04
19	GO:0090422: thiamine pyrophosphate transporter activity	1.64E-04
20	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	1.64E-04
21	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	3.73E-04
22	GO:0004103: choline kinase activity	3.73E-04
23	GO:0008883: glutamyl-tRNA reductase activity	3.73E-04
24	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	3.73E-04
25	GO:0046423: allene-oxide cyclase activity	6.11E-04
26	GO:0046592: polyamine oxidase activity	6.11E-04
27	GO:0019201: nucleotide kinase activity	8.73E-04
28	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	8.73E-04
29	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	8.73E-04
30	GO:0043015: gamma-tubulin binding	1.16E-03
31	GO:0019199: transmembrane receptor protein kinase activity	1.16E-03
32	GO:0018685: alkane 1-monooxygenase activity	1.47E-03
33	GO:0002020: protease binding	1.47E-03
34	GO:0004356: glutamate-ammonia ligase activity	1.47E-03
35	GO:0000210: NAD+ diphosphatase activity	1.80E-03
36	GO:0016462: pyrophosphatase activity	1.80E-03
37	GO:0008519: ammonium transmembrane transporter activity	1.80E-03
38	GO:0048040: UDP-glucuronate decarboxylase activity	1.80E-03
39	GO:0004017: adenylate kinase activity	2.17E-03
40	GO:0019900: kinase binding	2.17E-03
41	GO:0051020: GTPase binding	2.17E-03
42	GO:0070403: NAD+ binding	2.17E-03
43	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.17E-03
44	GO:0004747: ribokinase activity	2.17E-03
45	GO:0008143: poly(A) binding	2.55E-03
46	GO:0004143: diacylglycerol kinase activity	2.55E-03
47	GO:0004427: inorganic diphosphatase activity	2.55E-03
48	GO:0043565: sequence-specific DNA binding	2.93E-03
49	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.95E-03
50	GO:0008865: fructokinase activity	2.95E-03
51	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.21E-03
52	GO:0003951: NAD+ kinase activity	3.37E-03
53	GO:0008142: oxysterol binding	3.37E-03
54	GO:0003678: DNA helicase activity	3.81E-03
55	GO:0008047: enzyme activator activity	4.75E-03
56	GO:0004713: protein tyrosine kinase activity	4.75E-03
57	GO:0005315: inorganic phosphate transmembrane transporter activity	6.30E-03
58	GO:0019888: protein phosphatase regulator activity	6.30E-03
59	GO:0031625: ubiquitin protein ligase binding	6.75E-03
60	GO:0008131: primary amine oxidase activity	6.85E-03
61	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	7.12E-03
62	GO:0030246: carbohydrate binding	7.16E-03
63	GO:0008061: chitin binding	7.41E-03
64	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	8.16E-03
65	GO:0005516: calmodulin binding	8.48E-03
66	GO:0005385: zinc ion transmembrane transporter activity	8.59E-03
67	GO:0008324: cation transmembrane transporter activity	9.21E-03
68	GO:0051087: chaperone binding	9.21E-03
69	GO:0033612: receptor serine/threonine kinase binding	9.84E-03
70	GO:0022891: substrate-specific transmembrane transporter activity	1.11E-02
71	GO:0008514: organic anion transmembrane transporter activity	1.18E-02
72	GO:0005509: calcium ion binding	1.18E-02
73	GO:0015144: carbohydrate transmembrane transporter activity	1.30E-02
74	GO:0046873: metal ion transmembrane transporter activity	1.39E-02
75	GO:0005351: sugar:proton symporter activity	1.47E-02
76	GO:0004518: nuclease activity	1.70E-02
77	GO:0051015: actin filament binding	1.77E-02
78	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.27E-02
79	GO:0004683: calmodulin-dependent protein kinase activity	2.36E-02
80	GO:0102483: scopolin beta-glucosidase activity	2.36E-02
81	GO:0030247: polysaccharide binding	2.36E-02
82	GO:0050660: flavin adenine dinucleotide binding	2.70E-02
83	GO:0008422: beta-glucosidase activity	3.20E-02
84	GO:0052689: carboxylic ester hydrolase activity	3.20E-02
85	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.20E-02
86	GO:0050661: NADP binding	3.30E-02
87	GO:0051539: 4 iron, 4 sulfur cluster binding	3.30E-02
88	GO:0042803: protein homodimerization activity	3.63E-02
89	GO:0051537: 2 iron, 2 sulfur cluster binding	3.81E-02
90	GO:0043621: protein self-association	3.81E-02
91	GO:0035091: phosphatidylinositol binding	3.81E-02
92	GO:0016787: hydrolase activity	4.09E-02
93	GO:0016298: lipase activity	4.56E-02
94	GO:0009055: electron carrier activity	4.56E-02
95	GO:0044212: transcription regulatory region DNA binding	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	3.17E-07
2	GO:0016021: integral component of membrane	1.02E-04
3	GO:0016442: RISC complex	1.64E-04
4	GO:0005911: cell-cell junction	1.64E-04
5	GO:0010494: cytoplasmic stress granule	1.87E-04
6	GO:0016363: nuclear matrix	2.17E-03
7	GO:0090406: pollen tube	4.53E-03
8	GO:0090404: pollen tube tip	5.25E-03
9	GO:0048471: perinuclear region of cytoplasm	5.25E-03
10	GO:0010008: endosome membrane	7.44E-03
11	GO:0043234: protein complex	8.00E-03
12	GO:0005743: mitochondrial inner membrane	8.47E-03
13	GO:0005758: mitochondrial intermembrane space	8.59E-03
14	GO:0009506: plasmodesma	1.13E-02
15	GO:0005768: endosome	1.13E-02
16	GO:0005829: cytosol	1.69E-02
17	GO:0000145: exocyst	1.70E-02
18	GO:0032580: Golgi cisterna membrane	1.86E-02
19	GO:0005737: cytoplasm	1.90E-02
20	GO:0005778: peroxisomal membrane	1.94E-02
21	GO:0000932: P-body	2.10E-02
22	GO:0031902: late endosome membrane	3.40E-02
23	GO:0005635: nuclear envelope	4.67E-02