Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G55530

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033587: shikimate biosynthetic process0.00E+00
2GO:0016102: diterpenoid biosynthetic process0.00E+00
3GO:0043201: response to leucine0.00E+00
4GO:0080052: response to histidine0.00E+00
5GO:0080053: response to phenylalanine0.00E+00
6GO:0009753: response to jasmonic acid4.35E-07
7GO:0006564: L-serine biosynthetic process8.26E-07
8GO:0009809: lignin biosynthetic process1.20E-05
9GO:0009820: alkaloid metabolic process1.77E-05
10GO:0010365: positive regulation of ethylene biosynthetic process1.77E-05
11GO:0000494: box C/D snoRNA 3'-end processing1.77E-05
12GO:1990258: histone glutamine methylation1.77E-05
13GO:1901430: positive regulation of syringal lignin biosynthetic process1.77E-05
14GO:0009611: response to wounding4.02E-05
15GO:0042939: tripeptide transport4.61E-05
16GO:0071497: cellular response to freezing4.61E-05
17GO:0019632: shikimate metabolic process4.61E-05
18GO:0009617: response to bacterium6.64E-05
19GO:0009413: response to flooding1.23E-04
20GO:0010971: positive regulation of G2/M transition of mitotic cell cycle1.23E-04
21GO:0042938: dipeptide transport1.69E-04
22GO:0051781: positive regulation of cell division1.69E-04
23GO:0051365: cellular response to potassium ion starvation1.69E-04
24GO:0031167: rRNA methylation2.19E-04
25GO:0000304: response to singlet oxygen2.19E-04
26GO:0009751: response to salicylic acid2.24E-04
27GO:0009423: chorismate biosynthetic process3.27E-04
28GO:1900057: positive regulation of leaf senescence3.84E-04
29GO:0080027: response to herbivore3.84E-04
30GO:0050829: defense response to Gram-negative bacterium3.84E-04
31GO:0006857: oligopeptide transport3.87E-04
32GO:0009737: response to abscisic acid4.79E-04
33GO:0022900: electron transport chain5.05E-04
34GO:0001510: RNA methylation5.05E-04
35GO:0009793: embryo development ending in seed dormancy5.44E-04
36GO:0006754: ATP biosynthetic process5.68E-04
37GO:0006098: pentose-phosphate shunt5.68E-04
38GO:0042744: hydrogen peroxide catabolic process7.16E-04
39GO:0009073: aromatic amino acid family biosynthetic process7.68E-04
40GO:0009682: induced systemic resistance7.68E-04
41GO:0009887: animal organ morphogenesis9.82E-04
42GO:0048511: rhythmic process1.37E-03
43GO:0010089: xylem development1.63E-03
44GO:0009561: megagametogenesis1.63E-03
45GO:0008033: tRNA processing1.81E-03
46GO:0015991: ATP hydrolysis coupled proton transport1.81E-03
47GO:0006869: lipid transport2.09E-03
48GO:0055114: oxidation-reduction process2.11E-03
49GO:0019760: glucosinolate metabolic process2.49E-03
50GO:0007275: multicellular organism development2.70E-03
51GO:0051607: defense response to virus2.70E-03
52GO:0010029: regulation of seed germination2.91E-03
53GO:0051707: response to other organism4.68E-03
54GO:0008283: cell proliferation4.68E-03
55GO:0009664: plant-type cell wall organization5.48E-03
56GO:0042538: hyperosmotic salinity response5.48E-03
57GO:0006364: rRNA processing5.75E-03
58GO:0009626: plant-type hypersensitive response6.74E-03
59GO:0009620: response to fungus6.89E-03
60GO:0042545: cell wall modification7.19E-03
61GO:0006979: response to oxidative stress8.37E-03
62GO:0009058: biosynthetic process8.90E-03
63GO:0006413: translational initiation1.02E-02
64GO:0040008: regulation of growth1.04E-02
65GO:0010150: leaf senescence1.08E-02
66GO:0045490: pectin catabolic process1.08E-02
67GO:0009723: response to ethylene1.62E-02
68GO:0016042: lipid catabolic process2.20E-02
69GO:0050832: defense response to fungus2.48E-02
70GO:0009873: ethylene-activated signaling pathway2.70E-02
71GO:0009651: response to salt stress2.80E-02
72GO:0009734: auxin-activated signaling pathway2.87E-02
73GO:0009735: response to cytokinin3.18E-02
74GO:0009555: pollen development3.39E-02
75GO:0045893: positive regulation of transcription, DNA-templated3.74E-02
76GO:0055085: transmembrane transport4.01E-02
RankGO TermAdjusted P value
1GO:0003855: 3-dehydroquinate dehydratase activity0.00E+00
2GO:0004764: shikimate 3-dehydrogenase (NADP+) activity0.00E+00
3GO:0047681: aryl-alcohol dehydrogenase (NADP+) activity0.00E+00
4GO:0080013: (E,E)-geranyllinalool synthase activity0.00E+00
5GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H1.77E-05
6GO:1990259: histone-glutamine methyltransferase activity1.77E-05
7GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity1.77E-05
8GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity1.77E-05
9GO:0042937: tripeptide transporter activity4.61E-05
10GO:0004617: phosphoglycerate dehydrogenase activity4.61E-05
11GO:0008649: rRNA methyltransferase activity8.18E-05
12GO:0042936: dipeptide transporter activity1.69E-04
13GO:0030515: snoRNA binding3.84E-04
14GO:0052747: sinapyl alcohol dehydrogenase activity4.43E-04
15GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism5.68E-04
16GO:0045551: cinnamyl-alcohol dehydrogenase activity8.38E-04
17GO:0015198: oligopeptide transporter activity8.38E-04
18GO:0004022: alcohol dehydrogenase (NAD) activity9.08E-04
19GO:0008083: growth factor activity9.82E-04
20GO:0000287: magnesium ion binding1.28E-03
21GO:0004601: peroxidase activity1.30E-03
22GO:0016788: hydrolase activity, acting on ester bonds1.32E-03
23GO:0010333: terpene synthase activity1.37E-03
24GO:0005199: structural constituent of cell wall1.90E-03
25GO:0016597: amino acid binding2.70E-03
26GO:0008289: lipid binding3.24E-03
27GO:0016887: ATPase activity3.60E-03
28GO:0050661: NADP binding4.31E-03
29GO:0051287: NAD binding5.34E-03
30GO:0045330: aspartyl esterase activity6.17E-03
31GO:0030599: pectinesterase activity7.04E-03
32GO:0022857: transmembrane transporter activity7.04E-03
33GO:0046910: pectinesterase inhibitor activity1.02E-02
34GO:0003743: translation initiation factor activity1.20E-02
35GO:0020037: heme binding1.31E-02
36GO:0052689: carboxylic ester hydrolase activity1.83E-02
37GO:0004871: signal transducer activity2.00E-02
38GO:0046872: metal ion binding3.46E-02
39GO:0043565: sequence-specific DNA binding4.26E-02
RankGO TermAdjusted P value
1GO:0009530: primary cell wall8.18E-05
2GO:0031428: box C/D snoRNP complex2.72E-04
3GO:0015030: Cajal body6.32E-04
4GO:0031307: integral component of mitochondrial outer membrane8.38E-04
5GO:0032040: small-subunit processome8.38E-04
6GO:0031012: extracellular matrix9.08E-04
7GO:0005741: mitochondrial outer membrane1.37E-03
8GO:0009536: plastid1.49E-03
9GO:0009505: plant-type cell wall1.53E-03
10GO:0016592: mediator complex2.29E-03
11GO:0071944: cell periphery2.39E-03
12GO:0009570: chloroplast stroma2.61E-03
13GO:0009707: chloroplast outer membrane3.36E-03
14GO:0005576: extracellular region6.05E-03
15GO:0005618: cell wall6.54E-03
16GO:0009506: plasmodesma7.55E-03
17GO:0005794: Golgi apparatus1.20E-02
18GO:0046658: anchored component of plasma membrane1.31E-02
19GO:0005783: endoplasmic reticulum1.34E-02
20GO:0005886: plasma membrane2.65E-02
21GO:0005774: vacuolar membrane2.89E-02
22GO:0031225: anchored component of membrane4.65E-02
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Gene type



Gene DE type