Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G55210

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071000: response to magnetism0.00E+00
2GO:0018316: peptide cross-linking via L-cystine0.00E+00
3GO:0090071: negative regulation of ribosome biogenesis0.00E+00
4GO:0009583: detection of light stimulus0.00E+00
5GO:0072387: flavin adenine dinucleotide metabolic process2.19E-05
6GO:0071454: cellular response to anoxia2.19E-05
7GO:0048438: floral whorl development2.19E-05
8GO:0010617: circadian regulation of calcium ion oscillation5.64E-05
9GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation5.64E-05
10GO:0099402: plant organ development5.64E-05
11GO:0080153: negative regulation of reductive pentose-phosphate cycle5.64E-05
12GO:0010343: singlet oxygen-mediated programmed cell death5.64E-05
13GO:1901529: positive regulation of anion channel activity5.64E-05
14GO:0006954: inflammatory response9.94E-05
15GO:1902448: positive regulation of shade avoidance9.94E-05
16GO:1901672: positive regulation of systemic acquired resistance9.94E-05
17GO:0009658: chloroplast organization1.43E-04
18GO:1901332: negative regulation of lateral root development1.49E-04
19GO:0090307: mitotic spindle assembly1.49E-04
20GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center1.49E-04
21GO:0031122: cytoplasmic microtubule organization2.04E-04
22GO:1902347: response to strigolactone2.04E-04
23GO:0031935: regulation of chromatin silencing2.04E-04
24GO:0009910: negative regulation of flower development2.46E-04
25GO:0010117: photoprotection2.62E-04
26GO:0046283: anthocyanin-containing compound metabolic process2.62E-04
27GO:0016123: xanthophyll biosynthetic process2.62E-04
28GO:0060918: auxin transport3.24E-04
29GO:1901371: regulation of leaf morphogenesis3.24E-04
30GO:0010076: maintenance of floral meristem identity3.89E-04
31GO:0017148: negative regulation of translation3.89E-04
32GO:0010310: regulation of hydrogen peroxide metabolic process3.89E-04
33GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.89E-04
34GO:0051510: regulation of unidimensional cell growth4.56E-04
35GO:1900056: negative regulation of leaf senescence4.56E-04
36GO:0080111: DNA demethylation4.56E-04
37GO:0009704: de-etiolation5.25E-04
38GO:0022900: electron transport chain5.98E-04
39GO:1900426: positive regulation of defense response to bacterium7.48E-04
40GO:0009638: phototropism7.48E-04
41GO:0010380: regulation of chlorophyll biosynthetic process7.48E-04
42GO:0045036: protein targeting to chloroplast8.27E-04
43GO:0010582: floral meristem determinacy9.89E-04
44GO:0010075: regulation of meristem growth1.07E-03
45GO:0009767: photosynthetic electron transport chain1.07E-03
46GO:0009785: blue light signaling pathway1.07E-03
47GO:0009266: response to temperature stimulus1.16E-03
48GO:0034605: cellular response to heat1.16E-03
49GO:0019253: reductive pentose-phosphate cycle1.16E-03
50GO:2000377: regulation of reactive oxygen species metabolic process1.43E-03
51GO:0070417: cellular response to cold2.04E-03
52GO:0010118: stomatal movement2.15E-03
53GO:0042752: regulation of circadian rhythm2.38E-03
54GO:0009646: response to absence of light2.38E-03
55GO:0009791: post-embryonic development2.49E-03
56GO:0016126: sterol biosynthetic process3.34E-03
57GO:0009816: defense response to bacterium, incompatible interaction3.47E-03
58GO:0018298: protein-chromophore linkage4.00E-03
59GO:0010218: response to far red light4.28E-03
60GO:0006811: ion transport4.28E-03
61GO:0009637: response to blue light4.70E-03
62GO:0009416: response to light stimulus5.34E-03
63GO:0010114: response to red light5.60E-03
64GO:0009744: response to sucrose5.60E-03
65GO:0051707: response to other organism5.60E-03
66GO:0009640: photomorphogenesis5.60E-03
67GO:0009644: response to high light intensity5.91E-03
68GO:0000165: MAPK cascade6.39E-03
69GO:0051603: proteolysis involved in cellular protein catabolic process7.05E-03
70GO:0006417: regulation of translation7.38E-03
71GO:0007623: circadian rhythm1.29E-02
72GO:0010228: vegetative to reproductive phase transition of meristem1.33E-02
73GO:0006810: transport1.59E-02
74GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.67E-02
75GO:0042254: ribosome biogenesis1.78E-02
76GO:0016192: vesicle-mediated transport2.13E-02
77GO:0046777: protein autophosphorylation2.15E-02
78GO:0045892: negative regulation of transcription, DNA-templated2.36E-02
79GO:0009751: response to salicylic acid2.68E-02
80GO:0045893: positive regulation of transcription, DNA-templated4.49E-02
81GO:0006457: protein folding4.89E-02
RankGO TermAdjusted P value
1GO:0030941: chloroplast targeting sequence binding2.19E-05
2GO:0000900: translation repressor activity, nucleic acid binding9.94E-05
3GO:0004848: ureidoglycolate hydrolase activity9.94E-05
4GO:0009882: blue light photoreceptor activity1.49E-04
5GO:0043023: ribosomal large subunit binding1.49E-04
6GO:0000254: C-4 methylsterol oxidase activity1.49E-04
7GO:0051861: glycolipid binding2.04E-04
8GO:0043015: gamma-tubulin binding2.04E-04
9GO:0051011: microtubule minus-end binding2.62E-04
10GO:0016491: oxidoreductase activity3.45E-04
11GO:0015631: tubulin binding3.89E-04
12GO:0071949: FAD binding6.71E-04
13GO:0031072: heat shock protein binding1.07E-03
14GO:0048038: quinone binding2.61E-03
15GO:0005200: structural constituent of cytoskeleton3.09E-03
16GO:0003746: translation elongation factor activity4.70E-03
17GO:0004185: serine-type carboxypeptidase activity5.60E-03
18GO:0051537: 2 iron, 2 sulfur cluster binding5.91E-03
19GO:0022857: transmembrane transporter activity8.43E-03
20GO:0051082: unfolded protein binding8.79E-03
21GO:0019843: rRNA binding1.03E-02
22GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.13E-02
23GO:0042802: identical protein binding1.53E-02
24GO:0005515: protein binding1.69E-02
25GO:0042803: protein homodimerization activity2.41E-02
26GO:0009055: electron carrier activity2.85E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast2.37E-05
2GO:0008274: gamma-tubulin ring complex5.64E-05
3GO:0016605: PML body9.94E-05
4GO:0000923: equatorial microtubule organizing center1.49E-04
5GO:0031359: integral component of chloroplast outer membrane4.56E-04
6GO:0000123: histone acetyltransferase complex4.56E-04
7GO:0046930: pore complex5.98E-04
8GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)6.71E-04
9GO:0000922: spindle pole6.71E-04
10GO:0016604: nuclear body7.48E-04
11GO:0043234: protein complex1.34E-03
12GO:0009707: chloroplast outer membrane4.00E-03
13GO:0005874: microtubule2.00E-02
14GO:0009535: chloroplast thylakoid membrane2.43E-02
15GO:0009534: chloroplast thylakoid4.66E-02
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Gene type



Gene DE type