GO Enrichment Analysis of Co-expressed Genes with
AT5G55170
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901799: negative regulation of proteasomal protein catabolic process | 0.00E+00 |
| 2 | GO:0001881: receptor recycling | 0.00E+00 |
| 3 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 4 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 5 | GO:0019428: allantoin biosynthetic process | 0.00E+00 |
| 6 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.43E-14 |
| 7 | GO:0051603: proteolysis involved in cellular protein catabolic process | 5.00E-07 |
| 8 | GO:0008333: endosome to lysosome transport | 6.94E-06 |
| 9 | GO:0043248: proteasome assembly | 6.98E-05 |
| 10 | GO:0006144: purine nucleobase metabolic process | 2.00E-04 |
| 11 | GO:0001560: regulation of cell growth by extracellular stimulus | 2.00E-04 |
| 12 | GO:0019628: urate catabolic process | 2.00E-04 |
| 13 | GO:0030163: protein catabolic process | 2.12E-04 |
| 14 | GO:0019483: beta-alanine biosynthetic process | 4.48E-04 |
| 15 | GO:0045905: positive regulation of translational termination | 4.48E-04 |
| 16 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 4.48E-04 |
| 17 | GO:0045901: positive regulation of translational elongation | 4.48E-04 |
| 18 | GO:0046939: nucleotide phosphorylation | 4.48E-04 |
| 19 | GO:0006452: translational frameshifting | 4.48E-04 |
| 20 | GO:0006212: uracil catabolic process | 4.48E-04 |
| 21 | GO:0051788: response to misfolded protein | 4.48E-04 |
| 22 | GO:0006807: nitrogen compound metabolic process | 5.25E-04 |
| 23 | GO:0046417: chorismate metabolic process | 7.29E-04 |
| 24 | GO:0045793: positive regulation of cell size | 7.29E-04 |
| 25 | GO:0034227: tRNA thio-modification | 7.29E-04 |
| 26 | GO:0061077: chaperone-mediated protein folding | 9.79E-04 |
| 27 | GO:0009647: skotomorphogenesis | 1.04E-03 |
| 28 | GO:1901332: negative regulation of lateral root development | 1.04E-03 |
| 29 | GO:0006168: adenine salvage | 1.04E-03 |
| 30 | GO:0071786: endoplasmic reticulum tubular network organization | 1.04E-03 |
| 31 | GO:0051289: protein homotetramerization | 1.04E-03 |
| 32 | GO:0006882: cellular zinc ion homeostasis | 1.04E-03 |
| 33 | GO:0001676: long-chain fatty acid metabolic process | 1.04E-03 |
| 34 | GO:0032877: positive regulation of DNA endoreduplication | 1.04E-03 |
| 35 | GO:0006166: purine ribonucleoside salvage | 1.04E-03 |
| 36 | GO:0006107: oxaloacetate metabolic process | 1.04E-03 |
| 37 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.04E-03 |
| 38 | GO:0042147: retrograde transport, endosome to Golgi | 1.36E-03 |
| 39 | GO:0051781: positive regulation of cell division | 1.38E-03 |
| 40 | GO:0010387: COP9 signalosome assembly | 1.38E-03 |
| 41 | GO:0010363: regulation of plant-type hypersensitive response | 1.38E-03 |
| 42 | GO:0015991: ATP hydrolysis coupled proton transport | 1.47E-03 |
| 43 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.76E-03 |
| 44 | GO:0044209: AMP salvage | 1.76E-03 |
| 45 | GO:0045116: protein neddylation | 1.76E-03 |
| 46 | GO:0006555: methionine metabolic process | 2.17E-03 |
| 47 | GO:0006914: autophagy | 2.35E-03 |
| 48 | GO:0009612: response to mechanical stimulus | 2.60E-03 |
| 49 | GO:0019509: L-methionine salvage from methylthioadenosine | 2.60E-03 |
| 50 | GO:1901001: negative regulation of response to salt stress | 2.60E-03 |
| 51 | GO:0010044: response to aluminum ion | 3.06E-03 |
| 52 | GO:0048528: post-embryonic root development | 3.06E-03 |
| 53 | GO:1900056: negative regulation of leaf senescence | 3.06E-03 |
| 54 | GO:0000338: protein deneddylation | 3.06E-03 |
| 55 | GO:0009690: cytokinin metabolic process | 3.55E-03 |
| 56 | GO:0000028: ribosomal small subunit assembly | 3.55E-03 |
| 57 | GO:0031540: regulation of anthocyanin biosynthetic process | 3.55E-03 |
| 58 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 3.55E-03 |
| 59 | GO:0006506: GPI anchor biosynthetic process | 3.55E-03 |
| 60 | GO:0046686: response to cadmium ion | 3.85E-03 |
| 61 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.04E-03 |
| 62 | GO:0006526: arginine biosynthetic process | 4.06E-03 |
| 63 | GO:0043562: cellular response to nitrogen levels | 4.06E-03 |
| 64 | GO:0010043: response to zinc ion | 4.21E-03 |
| 65 | GO:0009821: alkaloid biosynthetic process | 4.60E-03 |
| 66 | GO:0046685: response to arsenic-containing substance | 4.60E-03 |
| 67 | GO:0009245: lipid A biosynthetic process | 4.60E-03 |
| 68 | GO:0045087: innate immune response | 4.61E-03 |
| 69 | GO:0009853: photorespiration | 4.61E-03 |
| 70 | GO:0071577: zinc II ion transmembrane transport | 5.15E-03 |
| 71 | GO:0000103: sulfate assimilation | 5.74E-03 |
| 72 | GO:0043069: negative regulation of programmed cell death | 5.74E-03 |
| 73 | GO:0009926: auxin polar transport | 5.94E-03 |
| 74 | GO:0009073: aromatic amino acid family biosynthetic process | 6.34E-03 |
| 75 | GO:0016925: protein sumoylation | 6.96E-03 |
| 76 | GO:0071365: cellular response to auxin stimulus | 6.96E-03 |
| 77 | GO:0008361: regulation of cell size | 6.96E-03 |
| 78 | GO:0006108: malate metabolic process | 7.61E-03 |
| 79 | GO:0007034: vacuolar transport | 8.28E-03 |
| 80 | GO:0002237: response to molecule of bacterial origin | 8.28E-03 |
| 81 | GO:0045454: cell redox homeostasis | 1.01E-02 |
| 82 | GO:0010187: negative regulation of seed germination | 1.04E-02 |
| 83 | GO:0006406: mRNA export from nucleus | 1.04E-02 |
| 84 | GO:0006289: nucleotide-excision repair | 1.04E-02 |
| 85 | GO:0006487: protein N-linked glycosylation | 1.04E-02 |
| 86 | GO:0009116: nucleoside metabolic process | 1.04E-02 |
| 87 | GO:0051302: regulation of cell division | 1.12E-02 |
| 88 | GO:0010431: seed maturation | 1.19E-02 |
| 89 | GO:0019748: secondary metabolic process | 1.27E-02 |
| 90 | GO:0009751: response to salicylic acid | 1.29E-02 |
| 91 | GO:0009408: response to heat | 1.32E-02 |
| 92 | GO:0010089: xylem development | 1.43E-02 |
| 93 | GO:0019722: calcium-mediated signaling | 1.43E-02 |
| 94 | GO:0034220: ion transmembrane transport | 1.60E-02 |
| 95 | GO:0000413: protein peptidyl-prolyl isomerization | 1.60E-02 |
| 96 | GO:0010118: stomatal movement | 1.60E-02 |
| 97 | GO:0006662: glycerol ether metabolic process | 1.69E-02 |
| 98 | GO:0006413: translational initiation | 1.85E-02 |
| 99 | GO:0048825: cotyledon development | 1.87E-02 |
| 100 | GO:0006623: protein targeting to vacuole | 1.87E-02 |
| 101 | GO:0010193: response to ozone | 1.97E-02 |
| 102 | GO:0080156: mitochondrial mRNA modification | 1.97E-02 |
| 103 | GO:0010286: heat acclimation | 2.35E-02 |
| 104 | GO:0009733: response to auxin | 2.38E-02 |
| 105 | GO:0000910: cytokinesis | 2.45E-02 |
| 106 | GO:0009615: response to virus | 2.55E-02 |
| 107 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.87E-02 |
| 108 | GO:0009817: defense response to fungus, incompatible interaction | 3.09E-02 |
| 109 | GO:0010311: lateral root formation | 3.20E-02 |
| 110 | GO:0006499: N-terminal protein myristoylation | 3.31E-02 |
| 111 | GO:0000724: double-strand break repair via homologous recombination | 3.54E-02 |
| 112 | GO:0009867: jasmonic acid mediated signaling pathway | 3.65E-02 |
| 113 | GO:0034599: cellular response to oxidative stress | 3.77E-02 |
| 114 | GO:0030001: metal ion transport | 4.01E-02 |
| 115 | GO:0006631: fatty acid metabolic process | 4.13E-02 |
| 116 | GO:0009640: photomorphogenesis | 4.37E-02 |
| 117 | GO:0051707: response to other organism | 4.37E-02 |
| 118 | GO:0006855: drug transmembrane transport | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0033971: hydroxyisourate hydrolase activity | 0.00E+00 |
| 3 | GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity | 0.00E+00 |
| 4 | GO:0016881: acid-amino acid ligase activity | 0.00E+00 |
| 5 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 6 | GO:0050152: omega-amidase activity | 0.00E+00 |
| 7 | GO:0004298: threonine-type endopeptidase activity | 2.70E-23 |
| 8 | GO:0008233: peptidase activity | 1.59E-15 |
| 9 | GO:0019786: Atg8-specific protease activity | 2.00E-04 |
| 10 | GO:0004129: cytochrome-c oxidase activity | 4.04E-04 |
| 11 | GO:0008794: arsenate reductase (glutaredoxin) activity | 4.04E-04 |
| 12 | GO:0018708: thiol S-methyltransferase activity | 4.48E-04 |
| 13 | GO:0004106: chorismate mutase activity | 4.48E-04 |
| 14 | GO:0008517: folic acid transporter activity | 4.48E-04 |
| 15 | GO:0019781: NEDD8 activating enzyme activity | 4.48E-04 |
| 16 | GO:0008805: carbon-monoxide oxygenase activity | 4.48E-04 |
| 17 | GO:0019779: Atg8 activating enzyme activity | 4.48E-04 |
| 18 | GO:0008430: selenium binding | 7.29E-04 |
| 19 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 7.29E-04 |
| 20 | GO:0005528: FK506 binding | 8.13E-04 |
| 21 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.42E-04 |
| 22 | GO:0003999: adenine phosphoribosyltransferase activity | 1.04E-03 |
| 23 | GO:0019201: nucleotide kinase activity | 1.04E-03 |
| 24 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.38E-03 |
| 25 | GO:0070628: proteasome binding | 1.38E-03 |
| 26 | GO:0004576: oligosaccharyl transferase activity | 1.38E-03 |
| 27 | GO:0019776: Atg8 ligase activity | 1.38E-03 |
| 28 | GO:0015368: calcium:cation antiporter activity | 1.38E-03 |
| 29 | GO:0010011: auxin binding | 1.38E-03 |
| 30 | GO:0015369: calcium:proton antiporter activity | 1.38E-03 |
| 31 | GO:0031386: protein tag | 1.76E-03 |
| 32 | GO:0008641: small protein activating enzyme activity | 1.76E-03 |
| 33 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.76E-03 |
| 34 | GO:0004040: amidase activity | 1.76E-03 |
| 35 | GO:0015035: protein disulfide oxidoreductase activity | 1.82E-03 |
| 36 | GO:0031593: polyubiquitin binding | 2.17E-03 |
| 37 | GO:0031177: phosphopantetheine binding | 2.17E-03 |
| 38 | GO:0004017: adenylate kinase activity | 2.60E-03 |
| 39 | GO:0000035: acyl binding | 2.60E-03 |
| 40 | GO:0004656: procollagen-proline 4-dioxygenase activity | 2.60E-03 |
| 41 | GO:0102391: decanoate--CoA ligase activity | 2.60E-03 |
| 42 | GO:0004467: long-chain fatty acid-CoA ligase activity | 3.06E-03 |
| 43 | GO:0042162: telomeric DNA binding | 3.06E-03 |
| 44 | GO:0043022: ribosome binding | 3.55E-03 |
| 45 | GO:0015491: cation:cation antiporter activity | 3.55E-03 |
| 46 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 3.55E-03 |
| 47 | GO:0015078: hydrogen ion transmembrane transporter activity | 4.06E-03 |
| 48 | GO:0000989: transcription factor activity, transcription factor binding | 4.60E-03 |
| 49 | GO:0003746: translation elongation factor activity | 4.61E-03 |
| 50 | GO:0003697: single-stranded DNA binding | 4.61E-03 |
| 51 | GO:0016844: strictosidine synthase activity | 5.15E-03 |
| 52 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 6.34E-03 |
| 53 | GO:0008327: methyl-CpG binding | 6.34E-03 |
| 54 | GO:0008559: xenobiotic-transporting ATPase activity | 6.34E-03 |
| 55 | GO:0003712: transcription cofactor activity | 8.97E-03 |
| 56 | GO:0031418: L-ascorbic acid binding | 1.04E-02 |
| 57 | GO:0005385: zinc ion transmembrane transporter activity | 1.04E-02 |
| 58 | GO:0043130: ubiquitin binding | 1.04E-02 |
| 59 | GO:0047134: protein-disulfide reductase activity | 1.52E-02 |
| 60 | GO:0046873: metal ion transmembrane transporter activity | 1.69E-02 |
| 61 | GO:0004791: thioredoxin-disulfide reductase activity | 1.78E-02 |
| 62 | GO:0004872: receptor activity | 1.87E-02 |
| 63 | GO:0005515: protein binding | 1.94E-02 |
| 64 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 1.97E-02 |
| 65 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.16E-02 |
| 66 | GO:0003684: damaged DNA binding | 2.25E-02 |
| 67 | GO:0003743: translation initiation factor activity | 2.32E-02 |
| 68 | GO:0008237: metallopeptidase activity | 2.35E-02 |
| 69 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.52E-02 |
| 70 | GO:0015250: water channel activity | 2.55E-02 |
| 71 | GO:0016788: hydrolase activity, acting on ester bonds | 3.13E-02 |
| 72 | GO:0004222: metalloendopeptidase activity | 3.31E-02 |
| 73 | GO:0050897: cobalt ion binding | 3.42E-02 |
| 74 | GO:0003729: mRNA binding | 3.60E-02 |
| 75 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.65E-02 |
| 76 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.01E-02 |
| 77 | GO:0004364: glutathione transferase activity | 4.25E-02 |
| 78 | GO:0004185: serine-type carboxypeptidase activity | 4.37E-02 |
| 79 | GO:0043621: protein self-association | 4.62E-02 |
| 80 | GO:0005198: structural molecule activity | 4.75E-02 |
| 81 | GO:0004722: protein serine/threonine phosphatase activity | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 3.96E-26 |
| 2 | GO:0005839: proteasome core complex | 2.70E-23 |
| 3 | GO:0019773: proteasome core complex, alpha-subunit complex | 2.18E-10 |
| 4 | GO:0005829: cytosol | 7.54E-09 |
| 5 | GO:0005774: vacuolar membrane | 3.25E-07 |
| 6 | GO:0005783: endoplasmic reticulum | 6.02E-07 |
| 7 | GO:0005773: vacuole | 6.44E-07 |
| 8 | GO:0005788: endoplasmic reticulum lumen | 2.05E-05 |
| 9 | GO:0005771: multivesicular body | 6.98E-05 |
| 10 | GO:0030904: retromer complex | 6.98E-05 |
| 11 | GO:0000421: autophagosome membrane | 1.64E-04 |
| 12 | GO:0031234: extrinsic component of cytoplasmic side of plasma membrane | 2.00E-04 |
| 13 | GO:0019774: proteasome core complex, beta-subunit complex | 2.00E-04 |
| 14 | GO:0009510: plasmodesmatal desmotubule | 2.00E-04 |
| 15 | GO:0008541: proteasome regulatory particle, lid subcomplex | 4.04E-04 |
| 16 | GO:0005737: cytoplasm | 4.39E-04 |
| 17 | GO:0005697: telomerase holoenzyme complex | 4.48E-04 |
| 18 | GO:0046861: glyoxysomal membrane | 7.29E-04 |
| 19 | GO:0005794: Golgi apparatus | 8.30E-04 |
| 20 | GO:0045271: respiratory chain complex I | 8.95E-04 |
| 21 | GO:0071782: endoplasmic reticulum tubular network | 1.04E-03 |
| 22 | GO:0005775: vacuolar lumen | 1.04E-03 |
| 23 | GO:0033180: proton-transporting V-type ATPase, V1 domain | 1.04E-03 |
| 24 | GO:0031410: cytoplasmic vesicle | 1.07E-03 |
| 25 | GO:0005789: endoplasmic reticulum membrane | 1.10E-03 |
| 26 | GO:0005776: autophagosome | 1.38E-03 |
| 27 | GO:0033179: proton-transporting V-type ATPase, V0 domain | 1.38E-03 |
| 28 | GO:0005747: mitochondrial respiratory chain complex I | 1.44E-03 |
| 29 | GO:0022626: cytosolic ribosome | 1.55E-03 |
| 30 | GO:0008250: oligosaccharyltransferase complex | 1.76E-03 |
| 31 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 3.55E-03 |
| 32 | GO:0009514: glyoxysome | 4.06E-03 |
| 33 | GO:0015934: large ribosomal subunit | 4.21E-03 |
| 34 | GO:0000325: plant-type vacuole | 4.21E-03 |
| 35 | GO:0008180: COP9 signalosome | 4.60E-03 |
| 36 | GO:0031090: organelle membrane | 4.60E-03 |
| 37 | GO:0005763: mitochondrial small ribosomal subunit | 4.60E-03 |
| 38 | GO:0031902: late endosome membrane | 5.48E-03 |
| 39 | GO:0005740: mitochondrial envelope | 5.74E-03 |
| 40 | GO:0005665: DNA-directed RNA polymerase II, core complex | 6.96E-03 |
| 41 | GO:0031966: mitochondrial membrane | 7.46E-03 |
| 42 | GO:0009508: plastid chromosome | 7.61E-03 |
| 43 | GO:0005750: mitochondrial respiratory chain complex III | 8.28E-03 |
| 44 | GO:0000419: DNA-directed RNA polymerase V complex | 9.68E-03 |
| 45 | GO:0070469: respiratory chain | 1.12E-02 |
| 46 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.25E-02 |
| 47 | GO:0009507: chloroplast | 1.34E-02 |
| 48 | GO:0009504: cell plate | 1.87E-02 |
| 49 | GO:0009295: nucleoid | 2.35E-02 |
| 50 | GO:0019005: SCF ubiquitin ligase complex | 3.09E-02 |
| 51 | GO:0005874: microtubule | 3.67E-02 |
| 52 | GO:0005819: spindle | 3.89E-02 |
| 53 | GO:0022625: cytosolic large ribosomal subunit | 3.99E-02 |
| 54 | GO:0005802: trans-Golgi network | 4.85E-02 |