GO Enrichment Analysis of Co-expressed Genes with
AT5G54920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 2 | GO:0006489: dolichyl diphosphate biosynthetic process | 0.00E+00 |
| 3 | GO:0001881: receptor recycling | 0.00E+00 |
| 4 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 5 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 6 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.78E-16 |
| 7 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.14E-07 |
| 8 | GO:0030163: protein catabolic process | 1.45E-04 |
| 9 | GO:1990022: RNA polymerase III complex localization to nucleus | 1.64E-04 |
| 10 | GO:0044376: RNA polymerase II complex import to nucleus | 1.64E-04 |
| 11 | GO:0010265: SCF complex assembly | 1.64E-04 |
| 12 | GO:0006820: anion transport | 3.54E-04 |
| 13 | GO:0010043: response to zinc ion | 3.55E-04 |
| 14 | GO:0006452: translational frameshifting | 3.73E-04 |
| 15 | GO:0006212: uracil catabolic process | 3.73E-04 |
| 16 | GO:0051788: response to misfolded protein | 3.73E-04 |
| 17 | GO:1901703: protein localization involved in auxin polar transport | 3.73E-04 |
| 18 | GO:0019483: beta-alanine biosynthetic process | 3.73E-04 |
| 19 | GO:0015786: UDP-glucose transport | 3.73E-04 |
| 20 | GO:0019752: carboxylic acid metabolic process | 3.73E-04 |
| 21 | GO:0045905: positive regulation of translational termination | 3.73E-04 |
| 22 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 3.73E-04 |
| 23 | GO:0045901: positive regulation of translational elongation | 3.73E-04 |
| 24 | GO:0046939: nucleotide phosphorylation | 3.73E-04 |
| 25 | GO:0006626: protein targeting to mitochondrion | 4.03E-04 |
| 26 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.69E-04 |
| 27 | GO:0046168: glycerol-3-phosphate catabolic process | 6.11E-04 |
| 28 | GO:0008333: endosome to lysosome transport | 6.11E-04 |
| 29 | GO:0046417: chorismate metabolic process | 6.11E-04 |
| 30 | GO:0045793: positive regulation of cell size | 6.11E-04 |
| 31 | GO:0015783: GDP-fucose transport | 6.11E-04 |
| 32 | GO:0046686: response to cadmium ion | 6.26E-04 |
| 33 | GO:0006487: protein N-linked glycosylation | 6.27E-04 |
| 34 | GO:0072334: UDP-galactose transmembrane transport | 8.73E-04 |
| 35 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 8.73E-04 |
| 36 | GO:0006072: glycerol-3-phosphate metabolic process | 8.73E-04 |
| 37 | GO:0009647: skotomorphogenesis | 8.73E-04 |
| 38 | GO:0006168: adenine salvage | 8.73E-04 |
| 39 | GO:0071786: endoplasmic reticulum tubular network organization | 8.73E-04 |
| 40 | GO:0006882: cellular zinc ion homeostasis | 8.73E-04 |
| 41 | GO:0001676: long-chain fatty acid metabolic process | 8.73E-04 |
| 42 | GO:0046513: ceramide biosynthetic process | 8.73E-04 |
| 43 | GO:0032877: positive regulation of DNA endoreduplication | 8.73E-04 |
| 44 | GO:0006166: purine ribonucleoside salvage | 8.73E-04 |
| 45 | GO:0010051: xylem and phloem pattern formation | 1.13E-03 |
| 46 | GO:0010363: regulation of plant-type hypersensitive response | 1.16E-03 |
| 47 | GO:0051781: positive regulation of cell division | 1.16E-03 |
| 48 | GO:0010387: COP9 signalosome assembly | 1.16E-03 |
| 49 | GO:0036065: fucosylation | 1.47E-03 |
| 50 | GO:0018279: protein N-linked glycosylation via asparagine | 1.47E-03 |
| 51 | GO:0044209: AMP salvage | 1.47E-03 |
| 52 | GO:0045116: protein neddylation | 1.47E-03 |
| 53 | GO:0043248: proteasome assembly | 1.80E-03 |
| 54 | GO:1901001: negative regulation of response to salt stress | 2.17E-03 |
| 55 | GO:0009612: response to mechanical stimulus | 2.17E-03 |
| 56 | GO:0000338: protein deneddylation | 2.55E-03 |
| 57 | GO:0048528: post-embryonic root development | 2.55E-03 |
| 58 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.95E-03 |
| 59 | GO:0009690: cytokinin metabolic process | 2.95E-03 |
| 60 | GO:0050821: protein stabilization | 2.95E-03 |
| 61 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.95E-03 |
| 62 | GO:0010417: glucuronoxylan biosynthetic process | 3.37E-03 |
| 63 | GO:0010100: negative regulation of photomorphogenesis | 3.37E-03 |
| 64 | GO:0006526: arginine biosynthetic process | 3.37E-03 |
| 65 | GO:0043562: cellular response to nitrogen levels | 3.37E-03 |
| 66 | GO:0010093: specification of floral organ identity | 3.37E-03 |
| 67 | GO:0045087: innate immune response | 3.52E-03 |
| 68 | GO:0098656: anion transmembrane transport | 3.81E-03 |
| 69 | GO:0046685: response to arsenic-containing substance | 3.81E-03 |
| 70 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 4.27E-03 |
| 71 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.27E-03 |
| 72 | GO:0071577: zinc II ion transmembrane transport | 4.27E-03 |
| 73 | GO:0043069: negative regulation of programmed cell death | 4.75E-03 |
| 74 | GO:0015770: sucrose transport | 5.25E-03 |
| 75 | GO:0009073: aromatic amino acid family biosynthetic process | 5.25E-03 |
| 76 | GO:0016925: protein sumoylation | 5.77E-03 |
| 77 | GO:0006807: nitrogen compound metabolic process | 6.30E-03 |
| 78 | GO:0007034: vacuolar transport | 6.85E-03 |
| 79 | GO:0009969: xyloglucan biosynthetic process | 7.41E-03 |
| 80 | GO:0034976: response to endoplasmic reticulum stress | 8.00E-03 |
| 81 | GO:0006071: glycerol metabolic process | 8.00E-03 |
| 82 | GO:0000027: ribosomal large subunit assembly | 8.59E-03 |
| 83 | GO:0030150: protein import into mitochondrial matrix | 8.59E-03 |
| 84 | GO:0010187: negative regulation of seed germination | 8.59E-03 |
| 85 | GO:0006289: nucleotide-excision repair | 8.59E-03 |
| 86 | GO:0009116: nucleoside metabolic process | 8.59E-03 |
| 87 | GO:0010073: meristem maintenance | 9.21E-03 |
| 88 | GO:0061077: chaperone-mediated protein folding | 9.84E-03 |
| 89 | GO:0051260: protein homooligomerization | 9.84E-03 |
| 90 | GO:0010431: seed maturation | 9.84E-03 |
| 91 | GO:0007005: mitochondrion organization | 1.05E-02 |
| 92 | GO:0045492: xylan biosynthetic process | 1.18E-02 |
| 93 | GO:0010089: xylem development | 1.18E-02 |
| 94 | GO:0042147: retrograde transport, endosome to Golgi | 1.25E-02 |
| 95 | GO:0000413: protein peptidyl-prolyl isomerization | 1.32E-02 |
| 96 | GO:0010118: stomatal movement | 1.32E-02 |
| 97 | GO:0015991: ATP hydrolysis coupled proton transport | 1.32E-02 |
| 98 | GO:0010154: fruit development | 1.39E-02 |
| 99 | GO:0006520: cellular amino acid metabolic process | 1.39E-02 |
| 100 | GO:0015986: ATP synthesis coupled proton transport | 1.47E-02 |
| 101 | GO:0006623: protein targeting to vacuole | 1.54E-02 |
| 102 | GO:0010183: pollen tube guidance | 1.54E-02 |
| 103 | GO:0048825: cotyledon development | 1.54E-02 |
| 104 | GO:0009793: embryo development ending in seed dormancy | 1.54E-02 |
| 105 | GO:0009733: response to auxin | 1.58E-02 |
| 106 | GO:0080156: mitochondrial mRNA modification | 1.62E-02 |
| 107 | GO:0010193: response to ozone | 1.62E-02 |
| 108 | GO:0000910: cytokinesis | 2.02E-02 |
| 109 | GO:0009826: unidimensional cell growth | 2.25E-02 |
| 110 | GO:0009627: systemic acquired resistance | 2.27E-02 |
| 111 | GO:0006950: response to stress | 2.36E-02 |
| 112 | GO:0009817: defense response to fungus, incompatible interaction | 2.54E-02 |
| 113 | GO:0009832: plant-type cell wall biogenesis | 2.63E-02 |
| 114 | GO:0009834: plant-type secondary cell wall biogenesis | 2.72E-02 |
| 115 | GO:0006811: ion transport | 2.72E-02 |
| 116 | GO:0009867: jasmonic acid mediated signaling pathway | 3.01E-02 |
| 117 | GO:0030001: metal ion transport | 3.30E-02 |
| 118 | GO:0006631: fatty acid metabolic process | 3.40E-02 |
| 119 | GO:0045454: cell redox homeostasis | 3.46E-02 |
| 120 | GO:0008283: cell proliferation | 3.60E-02 |
| 121 | GO:0009640: photomorphogenesis | 3.60E-02 |
| 122 | GO:0009926: auxin polar transport | 3.60E-02 |
| 123 | GO:0051707: response to other organism | 3.60E-02 |
| 124 | GO:0008643: carbohydrate transport | 3.81E-02 |
| 125 | GO:0009965: leaf morphogenesis | 3.91E-02 |
| 126 | GO:0006855: drug transmembrane transport | 4.02E-02 |
| 127 | GO:0031347: regulation of defense response | 4.12E-02 |
| 128 | GO:0006812: cation transport | 4.23E-02 |
| 129 | GO:0009664: plant-type cell wall organization | 4.23E-02 |
| 130 | GO:0009846: pollen germination | 4.23E-02 |
| 131 | GO:0009408: response to heat | 4.26E-02 |
| 132 | GO:0006486: protein glycosylation | 4.45E-02 |
| 133 | GO:0009585: red, far-red light phototransduction | 4.45E-02 |
| 134 | GO:0009736: cytokinin-activated signaling pathway | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 2 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 3 | GO:0016881: acid-amino acid ligase activity | 0.00E+00 |
| 4 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 5 | GO:0004298: threonine-type endopeptidase activity | 3.90E-29 |
| 6 | GO:0008233: peptidase activity | 3.59E-21 |
| 7 | GO:0004576: oligosaccharyl transferase activity | 2.11E-05 |
| 8 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.42E-05 |
| 9 | GO:0031593: polyubiquitin binding | 5.10E-05 |
| 10 | GO:0015288: porin activity | 1.23E-04 |
| 11 | GO:0008308: voltage-gated anion channel activity | 1.53E-04 |
| 12 | GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity | 1.64E-04 |
| 13 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 1.64E-04 |
| 14 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 1.64E-04 |
| 15 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 1.64E-04 |
| 16 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 1.64E-04 |
| 17 | GO:0008237: metallopeptidase activity | 1.73E-04 |
| 18 | GO:0008805: carbon-monoxide oxygenase activity | 3.73E-04 |
| 19 | GO:0018708: thiol S-methyltransferase activity | 3.73E-04 |
| 20 | GO:0047517: 1,4-beta-D-xylan synthase activity | 3.73E-04 |
| 21 | GO:0004106: chorismate mutase activity | 3.73E-04 |
| 22 | GO:0008517: folic acid transporter activity | 3.73E-04 |
| 23 | GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity | 3.73E-04 |
| 24 | GO:0050291: sphingosine N-acyltransferase activity | 3.73E-04 |
| 25 | GO:0019781: NEDD8 activating enzyme activity | 3.73E-04 |
| 26 | GO:0004190: aspartic-type endopeptidase activity | 5.09E-04 |
| 27 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 6.11E-04 |
| 28 | GO:0005457: GDP-fucose transmembrane transporter activity | 6.11E-04 |
| 29 | GO:0008430: selenium binding | 6.11E-04 |
| 30 | GO:0015018: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | 6.11E-04 |
| 31 | GO:0043130: ubiquitin binding | 6.27E-04 |
| 32 | GO:0019201: nucleotide kinase activity | 8.73E-04 |
| 33 | GO:0003999: adenine phosphoribosyltransferase activity | 8.73E-04 |
| 34 | GO:0005460: UDP-glucose transmembrane transporter activity | 8.73E-04 |
| 35 | GO:0008097: 5S rRNA binding | 8.73E-04 |
| 36 | GO:0008514: organic anion transmembrane transporter activity | 9.73E-04 |
| 37 | GO:0070628: proteasome binding | 1.16E-03 |
| 38 | GO:0015368: calcium:cation antiporter activity | 1.16E-03 |
| 39 | GO:0010011: auxin binding | 1.16E-03 |
| 40 | GO:0015369: calcium:proton antiporter activity | 1.16E-03 |
| 41 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.47E-03 |
| 42 | GO:0008641: small protein activating enzyme activity | 1.47E-03 |
| 43 | GO:0004040: amidase activity | 1.47E-03 |
| 44 | GO:0042285: xylosyltransferase activity | 1.47E-03 |
| 45 | GO:0031386: protein tag | 1.47E-03 |
| 46 | GO:0102391: decanoate--CoA ligase activity | 2.17E-03 |
| 47 | GO:0004017: adenylate kinase activity | 2.17E-03 |
| 48 | GO:0004656: procollagen-proline 4-dioxygenase activity | 2.17E-03 |
| 49 | GO:0042162: telomeric DNA binding | 2.55E-03 |
| 50 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.55E-03 |
| 51 | GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity | 2.55E-03 |
| 52 | GO:0016831: carboxy-lyase activity | 2.55E-03 |
| 53 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.78E-03 |
| 54 | GO:0043022: ribosome binding | 2.95E-03 |
| 55 | GO:0015491: cation:cation antiporter activity | 2.95E-03 |
| 56 | GO:0003746: translation elongation factor activity | 3.52E-03 |
| 57 | GO:0003697: single-stranded DNA binding | 3.52E-03 |
| 58 | GO:0003993: acid phosphatase activity | 3.68E-03 |
| 59 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 3.81E-03 |
| 60 | GO:0000989: transcription factor activity, transcription factor binding | 3.81E-03 |
| 61 | GO:0008417: fucosyltransferase activity | 3.81E-03 |
| 62 | GO:0008794: arsenate reductase (glutaredoxin) activity | 5.25E-03 |
| 63 | GO:0008515: sucrose transmembrane transporter activity | 5.25E-03 |
| 64 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 5.25E-03 |
| 65 | GO:0008327: methyl-CpG binding | 5.25E-03 |
| 66 | GO:0008559: xenobiotic-transporting ATPase activity | 5.25E-03 |
| 67 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.28E-03 |
| 68 | GO:0015266: protein channel activity | 6.30E-03 |
| 69 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 6.30E-03 |
| 70 | GO:0004175: endopeptidase activity | 6.85E-03 |
| 71 | GO:0008266: poly(U) RNA binding | 6.85E-03 |
| 72 | GO:0051119: sugar transmembrane transporter activity | 7.41E-03 |
| 73 | GO:0003712: transcription cofactor activity | 7.41E-03 |
| 74 | GO:0004722: protein serine/threonine phosphatase activity | 8.01E-03 |
| 75 | GO:0005528: FK506 binding | 8.59E-03 |
| 76 | GO:0031418: L-ascorbic acid binding | 8.59E-03 |
| 77 | GO:0005385: zinc ion transmembrane transporter activity | 8.59E-03 |
| 78 | GO:0003756: protein disulfide isomerase activity | 1.18E-02 |
| 79 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.39E-02 |
| 80 | GO:0046873: metal ion transmembrane transporter activity | 1.39E-02 |
| 81 | GO:0016853: isomerase activity | 1.47E-02 |
| 82 | GO:0004872: receptor activity | 1.54E-02 |
| 83 | GO:0003684: damaged DNA binding | 1.86E-02 |
| 84 | GO:0003729: mRNA binding | 2.41E-02 |
| 85 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.01E-02 |
| 86 | GO:0003735: structural constituent of ribosome | 3.68E-02 |
| 87 | GO:0043621: protein self-association | 3.81E-02 |
| 88 | GO:0051287: NAD binding | 4.12E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 3.19E-29 |
| 2 | GO:0005839: proteasome core complex | 3.90E-29 |
| 3 | GO:0019773: proteasome core complex, alpha-subunit complex | 9.77E-16 |
| 4 | GO:0005774: vacuolar membrane | 7.51E-11 |
| 5 | GO:0005829: cytosol | 2.54E-10 |
| 6 | GO:0005783: endoplasmic reticulum | 9.27E-08 |
| 7 | GO:0005773: vacuole | 4.61E-06 |
| 8 | GO:0005788: endoplasmic reticulum lumen | 1.18E-05 |
| 9 | GO:0022626: cytosolic ribosome | 2.90E-05 |
| 10 | GO:0008250: oligosaccharyltransferase complex | 3.42E-05 |
| 11 | GO:0005737: cytoplasm | 8.94E-05 |
| 12 | GO:0005794: Golgi apparatus | 1.01E-04 |
| 13 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.23E-04 |
| 14 | GO:0046930: pore complex | 1.53E-04 |
| 15 | GO:0009510: plasmodesmatal desmotubule | 1.64E-04 |
| 16 | GO:0019774: proteasome core complex, beta-subunit complex | 1.64E-04 |
| 17 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.08E-04 |
| 18 | GO:0015934: large ribosomal subunit | 3.55E-04 |
| 19 | GO:0005697: telomerase holoenzyme complex | 3.73E-04 |
| 20 | GO:0005789: endoplasmic reticulum membrane | 5.99E-04 |
| 21 | GO:0046861: glyoxysomal membrane | 6.11E-04 |
| 22 | GO:0005741: mitochondrial outer membrane | 7.57E-04 |
| 23 | GO:0033180: proton-transporting V-type ATPase, V1 domain | 8.73E-04 |
| 24 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 8.73E-04 |
| 25 | GO:0071782: endoplasmic reticulum tubular network | 8.73E-04 |
| 26 | GO:0030660: Golgi-associated vesicle membrane | 1.16E-03 |
| 27 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 1.16E-03 |
| 28 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 1.16E-03 |
| 29 | GO:0005886: plasma membrane | 1.76E-03 |
| 30 | GO:0005771: multivesicular body | 1.80E-03 |
| 31 | GO:0030904: retromer complex | 1.80E-03 |
| 32 | GO:0031595: nuclear proteasome complex | 2.55E-03 |
| 33 | GO:0005742: mitochondrial outer membrane translocase complex | 3.37E-03 |
| 34 | GO:0009514: glyoxysome | 3.37E-03 |
| 35 | GO:0008180: COP9 signalosome | 3.81E-03 |
| 36 | GO:0031090: organelle membrane | 3.81E-03 |
| 37 | GO:0016021: integral component of membrane | 3.83E-03 |
| 38 | GO:0005765: lysosomal membrane | 5.25E-03 |
| 39 | GO:0022625: cytosolic large ribosomal subunit | 6.04E-03 |
| 40 | GO:0009508: plastid chromosome | 6.30E-03 |
| 41 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 7.41E-03 |
| 42 | GO:0005758: mitochondrial intermembrane space | 8.59E-03 |
| 43 | GO:0005730: nucleolus | 8.96E-03 |
| 44 | GO:0005732: small nucleolar ribonucleoprotein complex | 9.47E-03 |
| 45 | GO:0005768: endosome | 1.13E-02 |
| 46 | GO:0009506: plasmodesma | 1.13E-02 |
| 47 | GO:0009504: cell plate | 1.54E-02 |
| 48 | GO:0032580: Golgi cisterna membrane | 1.86E-02 |
| 49 | GO:0009295: nucleoid | 1.94E-02 |
| 50 | GO:0019005: SCF ubiquitin ligase complex | 2.54E-02 |
| 51 | GO:0000325: plant-type vacuole | 2.82E-02 |
| 52 | GO:0005819: spindle | 3.20E-02 |
| 53 | GO:0031902: late endosome membrane | 3.40E-02 |
| 54 | GO:0005802: trans-Golgi network | 3.47E-02 |
| 55 | GO:0090406: pollen tube | 3.60E-02 |
| 56 | GO:0005743: mitochondrial inner membrane | 3.96E-02 |
| 57 | GO:0016020: membrane | 4.57E-02 |