co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G54650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0034263: positive regulation of autophagy in response to ER overload	0.00E+00
2	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
3	GO:2001142: nicotinate transport	0.00E+00
4	GO:0042353: fucose biosynthetic process	0.00E+00
5	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
6	GO:0009268: response to pH	0.00E+00
7	GO:0032499: detection of peptidoglycan	0.00E+00
8	GO:2001143: N-methylnicotinate transport	0.00E+00
9	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
10	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
11	GO:0009560: embryo sac egg cell differentiation	0.00E+00
12	GO:0010200: response to chitin	2.94E-08
13	GO:0009611: response to wounding	2.43E-06
14	GO:0006468: protein phosphorylation	5.97E-06
15	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	1.71E-05
16	GO:0002679: respiratory burst involved in defense response	3.81E-05
17	GO:0045227: capsule polysaccharide biosynthetic process	6.79E-05
18	GO:0033358: UDP-L-arabinose biosynthetic process	6.79E-05
19	GO:0034440: lipid oxidation	6.79E-05
20	GO:0009225: nucleotide-sugar metabolic process	9.55E-05
21	GO:0009695: jasmonic acid biosynthetic process	1.52E-04
22	GO:0080086: stamen filament development	2.10E-04
23	GO:0006955: immune response	2.73E-04
24	GO:0048653: anther development	3.14E-04
25	GO:0006562: proline catabolic process	3.27E-04
26	GO:0010482: regulation of epidermal cell division	3.27E-04
27	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.27E-04
28	GO:0015854: guanine transport	3.27E-04
29	GO:0007229: integrin-mediated signaling pathway	3.27E-04
30	GO:0080157: regulation of plant-type cell wall organization or biogenesis	3.27E-04
31	GO:0050691: regulation of defense response to virus by host	3.27E-04
32	GO:0032491: detection of molecule of fungal origin	3.27E-04
33	GO:1900384: regulation of flavonol biosynthetic process	3.27E-04
34	GO:0009966: regulation of signal transduction	3.27E-04
35	GO:0015853: adenine transport	3.27E-04
36	GO:0009699: phenylpropanoid biosynthetic process	4.21E-04
37	GO:0002229: defense response to oomycetes	4.58E-04
38	GO:0051865: protein autoubiquitination	5.07E-04
39	GO:0009835: fruit ripening	5.07E-04
40	GO:0042742: defense response to bacterium	6.55E-04
41	GO:0009620: response to fungus	6.73E-04
42	GO:0006741: NADP biosynthetic process	7.13E-04
43	GO:0010372: positive regulation of gibberellin biosynthetic process	7.13E-04
44	GO:0048480: stigma development	7.13E-04
45	GO:0046939: nucleotide phosphorylation	7.13E-04
46	GO:0010155: regulation of proton transport	7.13E-04
47	GO:0010133: proline catabolic process to glutamate	7.13E-04
48	GO:0042754: negative regulation of circadian rhythm	7.13E-04
49	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	7.86E-04
50	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.18E-04
51	GO:0000266: mitochondrial fission	9.18E-04
52	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	1.16E-03
53	GO:0010447: response to acidic pH	1.16E-03
54	GO:0080168: abscisic acid transport	1.16E-03
55	GO:0010366: negative regulation of ethylene biosynthetic process	1.16E-03
56	GO:0019674: NAD metabolic process	1.16E-03
57	GO:0009901: anther dehiscence	1.31E-03
58	GO:0009737: response to abscisic acid	1.41E-03
59	GO:0009863: salicylic acid mediated signaling pathway	1.61E-03
60	GO:0009555: pollen development	1.65E-03
61	GO:0006537: glutamate biosynthetic process	1.66E-03
62	GO:0033014: tetrapyrrole biosynthetic process	1.66E-03
63	GO:0030100: regulation of endocytosis	1.66E-03
64	GO:0009399: nitrogen fixation	1.66E-03
65	GO:0071323: cellular response to chitin	1.66E-03
66	GO:0006986: response to unfolded protein	1.66E-03
67	GO:0046836: glycolipid transport	1.66E-03
68	GO:0019363: pyridine nucleotide biosynthetic process	1.66E-03
69	GO:0031408: oxylipin biosynthetic process	1.95E-03
70	GO:0006470: protein dephosphorylation	2.17E-03
71	GO:0033320: UDP-D-xylose biosynthetic process	2.23E-03
72	GO:0010107: potassium ion import	2.23E-03
73	GO:0071219: cellular response to molecule of bacterial origin	2.23E-03
74	GO:0001709: cell fate determination	2.23E-03
75	GO:0051567: histone H3-K9 methylation	2.23E-03
76	GO:1902347: response to strigolactone	2.23E-03
77	GO:0009694: jasmonic acid metabolic process	2.23E-03
78	GO:0015743: malate transport	2.23E-03
79	GO:0009693: ethylene biosynthetic process	2.33E-03
80	GO:0009686: gibberellin biosynthetic process	2.33E-03
81	GO:0040007: growth	2.33E-03
82	GO:0006012: galactose metabolic process	2.33E-03
83	GO:0045487: gibberellin catabolic process	2.84E-03
84	GO:0006952: defense response	2.85E-03
85	GO:0048544: recognition of pollen	3.43E-03
86	GO:0010256: endomembrane system organization	3.51E-03
87	GO:0042732: D-xylose metabolic process	3.51E-03
88	GO:1900425: negative regulation of defense response to bacterium	3.51E-03
89	GO:0033365: protein localization to organelle	3.51E-03
90	GO:0010337: regulation of salicylic acid metabolic process	3.51E-03
91	GO:0006014: D-ribose metabolic process	3.51E-03
92	GO:0010942: positive regulation of cell death	3.51E-03
93	GO:0006751: glutathione catabolic process	3.51E-03
94	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	3.51E-03
95	GO:0006970: response to osmotic stress	3.85E-03
96	GO:0010193: response to ozone	3.94E-03
97	GO:0009651: response to salt stress	4.54E-03
98	GO:0009742: brassinosteroid mediated signaling pathway	4.67E-03
99	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	4.99E-03
100	GO:0071669: plant-type cell wall organization or biogenesis	4.99E-03
101	GO:0010044: response to aluminum ion	4.99E-03
102	GO:0046777: protein autophosphorylation	5.28E-03
103	GO:0016310: phosphorylation	5.55E-03
104	GO:0046686: response to cadmium ion	5.55E-03
105	GO:0009738: abscisic acid-activated signaling pathway	5.61E-03
106	GO:0006402: mRNA catabolic process	5.80E-03
107	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.80E-03
108	GO:1900150: regulation of defense response to fungus	5.80E-03
109	GO:2000070: regulation of response to water deprivation	5.80E-03
110	GO:0045010: actin nucleation	5.80E-03
111	GO:0009816: defense response to bacterium, incompatible interaction	6.03E-03
112	GO:0009414: response to water deprivation	6.36E-03
113	GO:0009932: cell tip growth	6.65E-03
114	GO:0060321: acceptance of pollen	6.65E-03
115	GO:0048193: Golgi vesicle transport	6.65E-03
116	GO:0030968: endoplasmic reticulum unfolded protein response	6.65E-03
117	GO:0010208: pollen wall assembly	6.65E-03
118	GO:0006979: response to oxidative stress	6.77E-03
119	GO:0008219: cell death	7.44E-03
120	GO:0046685: response to arsenic-containing substance	7.54E-03
121	GO:0090333: regulation of stomatal closure	7.54E-03
122	GO:0006783: heme biosynthetic process	7.54E-03
123	GO:0010311: lateral root formation	7.82E-03
124	GO:0006779: porphyrin-containing compound biosynthetic process	8.48E-03
125	GO:0009086: methionine biosynthetic process	8.48E-03
126	GO:0008202: steroid metabolic process	8.48E-03
127	GO:0009408: response to heat	8.63E-03
128	GO:0045087: innate immune response	9.44E-03
129	GO:0006782: protoporphyrinogen IX biosynthetic process	9.45E-03
130	GO:0019538: protein metabolic process	9.45E-03
131	GO:0009688: abscisic acid biosynthetic process	9.45E-03
132	GO:0048829: root cap development	9.45E-03
133	GO:0009753: response to jasmonic acid	9.60E-03
134	GO:0007166: cell surface receptor signaling pathway	1.03E-02
135	GO:0010015: root morphogenesis	1.05E-02
136	GO:1903507: negative regulation of nucleic acid-templated transcription	1.05E-02
137	GO:0015770: sucrose transport	1.05E-02
138	GO:0048765: root hair cell differentiation	1.05E-02
139	GO:0030148: sphingolipid biosynthetic process	1.05E-02
140	GO:0009684: indoleacetic acid biosynthetic process	1.05E-02
141	GO:0010152: pollen maturation	1.15E-02
142	GO:0002213: defense response to insect	1.15E-02
143	GO:0009409: response to cold	1.20E-02
144	GO:0051707: response to other organism	1.22E-02
145	GO:0018107: peptidyl-threonine phosphorylation	1.26E-02
146	GO:0055046: microgametogenesis	1.26E-02
147	GO:0009873: ethylene-activated signaling pathway	1.27E-02
148	GO:0034605: cellular response to heat	1.37E-02
149	GO:0002237: response to molecule of bacterial origin	1.37E-02
150	GO:0006446: regulation of translational initiation	1.37E-02
151	GO:0031347: regulation of defense response	1.48E-02
152	GO:0009969: xyloglucan biosynthetic process	1.49E-02
153	GO:0005985: sucrose metabolic process	1.49E-02
154	GO:0090351: seedling development	1.49E-02
155	GO:0070588: calcium ion transmembrane transport	1.49E-02
156	GO:0046854: phosphatidylinositol phosphorylation	1.49E-02
157	GO:0000162: tryptophan biosynthetic process	1.61E-02
158	GO:0006863: purine nucleobase transport	1.61E-02
159	GO:0010026: trichome differentiation	1.86E-02
160	GO:0043622: cortical microtubule organization	1.86E-02
161	GO:0061077: chaperone-mediated protein folding	1.99E-02
162	GO:0016998: cell wall macromolecule catabolic process	1.99E-02
163	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.08E-02
164	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.12E-02
165	GO:0030433: ubiquitin-dependent ERAD pathway	2.12E-02
166	GO:0007005: mitochondrion organization	2.12E-02
167	GO:0035556: intracellular signal transduction	2.22E-02
168	GO:0071215: cellular response to abscisic acid stimulus	2.25E-02
169	GO:0006817: phosphate ion transport	2.39E-02
170	GO:0019722: calcium-mediated signaling	2.39E-02
171	GO:0009306: protein secretion	2.39E-02
172	GO:0042631: cellular response to water deprivation	2.68E-02
173	GO:0000271: polysaccharide biosynthetic process	2.68E-02
174	GO:0010118: stomatal movement	2.68E-02
175	GO:0000398: mRNA splicing, via spliceosome	2.71E-02
176	GO:0010154: fruit development	2.82E-02
177	GO:0048868: pollen tube development	2.82E-02
178	GO:0009749: response to glucose	3.12E-02
179	GO:0019252: starch biosynthetic process	3.12E-02
180	GO:0009851: auxin biosynthetic process	3.12E-02
181	GO:0009845: seed germination	3.18E-02
182	GO:0009751: response to salicylic acid	3.19E-02
183	GO:0006891: intra-Golgi vesicle-mediated transport	3.28E-02
184	GO:0006397: mRNA processing	3.42E-02
185	GO:0031047: gene silencing by RNA	3.44E-02
186	GO:1901657: glycosyl compound metabolic process	3.60E-02
187	GO:0009639: response to red or far red light	3.76E-02
188	GO:0006914: autophagy	3.76E-02
189	GO:0010286: heat acclimation	3.92E-02
190	GO:0007267: cell-cell signaling	3.92E-02
191	GO:0006355: regulation of transcription, DNA-templated	4.00E-02
192	GO:0016579: protein deubiquitination	4.09E-02
193	GO:0001666: response to hypoxia	4.26E-02
194	GO:0009615: response to virus	4.26E-02
195	GO:0015995: chlorophyll biosynthetic process	4.78E-02
196	GO:0048573: photoperiodism, flowering	4.78E-02
197	GO:0009617: response to bacterium	4.82E-02
198	GO:0016049: cell growth	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0010293: abscisic aldehyde oxidase activity	0.00E+00
2	GO:0005522: profilin binding	0.00E+00
3	GO:0052694: jasmonoyl-isoleucine-12-hydroxylase activity	0.00E+00
4	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
5	GO:2001080: chitosan binding	0.00E+00
6	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
7	GO:0030621: U4 snRNA binding	0.00E+00
8	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
9	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
10	GO:0090416: nicotinate transporter activity	0.00E+00
11	GO:0016301: kinase activity	2.17E-08
12	GO:0004674: protein serine/threonine kinase activity	2.77E-07
13	GO:0005524: ATP binding	3.12E-07
14	GO:0016165: linoleate 13S-lipoxygenase activity	1.71E-05
15	GO:0050373: UDP-arabinose 4-epimerase activity	6.79E-05
16	GO:0003978: UDP-glucose 4-epimerase activity	2.10E-04
17	GO:0015085: calcium ion transmembrane transporter activity	3.27E-04
18	GO:0004657: proline dehydrogenase activity	3.27E-04
19	GO:0047150: betaine-homocysteine S-methyltransferase activity	3.27E-04
20	GO:0030544: Hsp70 protein binding	3.27E-04
21	GO:0090440: abscisic acid transporter activity	3.27E-04
22	GO:0042736: NADH kinase activity	3.27E-04
23	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	3.44E-04
24	GO:0003951: NAD+ kinase activity	4.21E-04
25	GO:0004672: protein kinase activity	5.38E-04
26	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	7.13E-04
27	GO:1990585: hydroxyproline O-arabinosyltransferase activity	7.13E-04
28	GO:0004103: choline kinase activity	7.13E-04
29	GO:0008883: glutamyl-tRNA reductase activity	7.13E-04
30	GO:0019888: protein phosphatase regulator activity	1.04E-03
31	GO:0003840: gamma-glutamyltransferase activity	1.16E-03
32	GO:0004758: serine C-palmitoyltransferase activity	1.16E-03
33	GO:0036374: glutathione hydrolase activity	1.16E-03
34	GO:0046423: allene-oxide cyclase activity	1.16E-03
35	GO:0004383: guanylate cyclase activity	1.16E-03
36	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.22E-03
37	GO:0017089: glycolipid transporter activity	1.66E-03
38	GO:0019201: nucleotide kinase activity	1.66E-03
39	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.66E-03
40	GO:0001653: peptide receptor activity	1.66E-03
41	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.66E-03
42	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.66E-03
43	GO:0051740: ethylene binding	1.66E-03
44	GO:0004722: protein serine/threonine phosphatase activity	1.76E-03
45	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.95E-03
46	GO:0051861: glycolipid binding	2.23E-03
47	GO:0043015: gamma-tubulin binding	2.23E-03
48	GO:0004031: aldehyde oxidase activity	2.23E-03
49	GO:0050302: indole-3-acetaldehyde oxidase activity	2.23E-03
50	GO:0019199: transmembrane receptor protein kinase activity	2.23E-03
51	GO:0005253: anion channel activity	2.23E-03
52	GO:0004834: tryptophan synthase activity	2.23E-03
53	GO:0047631: ADP-ribose diphosphatase activity	2.84E-03
54	GO:0002020: protease binding	2.84E-03
55	GO:0004356: glutamate-ammonia ligase activity	2.84E-03
56	GO:0017070: U6 snRNA binding	2.84E-03
57	GO:0048040: UDP-glucuronate decarboxylase activity	3.51E-03
58	GO:0070403: NAD+ binding	4.23E-03
59	GO:0051753: mannan synthase activity	4.23E-03
60	GO:0004017: adenylate kinase activity	4.23E-03
61	GO:0004747: ribokinase activity	4.23E-03
62	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	4.23E-03
63	GO:0019900: kinase binding	4.23E-03
64	GO:0008506: sucrose:proton symporter activity	4.99E-03
65	GO:0102425: myricetin 3-O-glucosyltransferase activity	4.99E-03
66	GO:0102360: daphnetin 3-O-glucosyltransferase activity	4.99E-03
67	GO:0016621: cinnamoyl-CoA reductase activity	4.99E-03
68	GO:0015140: malate transmembrane transporter activity	4.99E-03
69	GO:0008143: poly(A) binding	4.99E-03
70	GO:0004143: diacylglycerol kinase activity	4.99E-03
71	GO:0047893: flavonol 3-O-glucosyltransferase activity	5.80E-03
72	GO:0008865: fructokinase activity	5.80E-03
73	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.80E-03
74	GO:0030170: pyridoxal phosphate binding	6.60E-03
75	GO:0008142: oxysterol binding	6.65E-03
76	GO:0004430: 1-phosphatidylinositol 4-kinase activity	6.65E-03
77	GO:0016207: 4-coumarate-CoA ligase activity	7.54E-03
78	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.97E-03
79	GO:0047617: acyl-CoA hydrolase activity	8.48E-03
80	GO:0004673: protein histidine kinase activity	9.45E-03
81	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.03E-02
82	GO:0008515: sucrose transmembrane transporter activity	1.05E-02
83	GO:0004521: endoribonuclease activity	1.15E-02
84	GO:0004842: ubiquitin-protein transferase activity	1.25E-02
85	GO:0005388: calcium-transporting ATPase activity	1.26E-02
86	GO:0000155: phosphorelay sensor kinase activity	1.26E-02
87	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.37E-02
88	GO:0008061: chitin binding	1.49E-02
89	GO:0046872: metal ion binding	1.62E-02
90	GO:0003714: transcription corepressor activity	1.73E-02
91	GO:0050660: flavin adenine dinucleotide binding	1.83E-02
92	GO:0031625: ubiquitin protein ligase binding	1.83E-02
93	GO:0005345: purine nucleobase transmembrane transporter activity	1.86E-02
94	GO:0035251: UDP-glucosyltransferase activity	1.99E-02
95	GO:0004540: ribonuclease activity	1.99E-02
96	GO:0033612: receptor serine/threonine kinase binding	1.99E-02
97	GO:0044212: transcription regulatory region DNA binding	2.01E-02
98	GO:0022857: transmembrane transporter activity	2.21E-02
99	GO:0016760: cellulose synthase (UDP-forming) activity	2.25E-02
100	GO:0022891: substrate-specific transmembrane transporter activity	2.25E-02
101	GO:0003824: catalytic activity	2.36E-02
102	GO:0008536: Ran GTPase binding	2.82E-02
103	GO:0016757: transferase activity, transferring glycosyl groups	2.87E-02
104	GO:0005515: protein binding	2.90E-02
105	GO:0043565: sequence-specific DNA binding	2.96E-02
106	GO:0016853: isomerase activity	2.97E-02
107	GO:0050662: coenzyme binding	2.97E-02
108	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.08E-02
109	GO:0004872: receptor activity	3.12E-02
110	GO:0019901: protein kinase binding	3.12E-02
111	GO:0030246: carbohydrate binding	3.17E-02
112	GO:0004843: thiol-dependent ubiquitin-specific protease activity	3.28E-02
113	GO:0004518: nuclease activity	3.44E-02
114	GO:0015144: carbohydrate transmembrane transporter activity	3.52E-02
115	GO:0008565: protein transporter activity	3.52E-02
116	GO:0009055: electron carrier activity	3.54E-02
117	GO:0051015: actin filament binding	3.60E-02
118	GO:0005516: calmodulin binding	3.73E-02
119	GO:0016759: cellulose synthase activity	3.76E-02
120	GO:0003729: mRNA binding	3.91E-02
121	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.92E-02
122	GO:0005351: sugar:proton symporter activity	3.96E-02
123	GO:0008017: microtubule binding	4.24E-02
124	GO:0005525: GTP binding	4.24E-02
125	GO:0008375: acetylglucosaminyltransferase activity	4.61E-02
126	GO:0102483: scopolin beta-glucosidase activity	4.78E-02
127	GO:0004721: phosphoprotein phosphatase activity	4.78E-02
128	GO:0030247: polysaccharide binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.69E-10
2	GO:0032580: Golgi cisterna membrane	5.19E-05
3	GO:0030173: integral component of Golgi membrane	2.10E-04
4	GO:0016442: RISC complex	3.27E-04
5	GO:0005911: cell-cell junction	3.27E-04
6	GO:0019008: molybdopterin synthase complex	3.27E-04
7	GO:0010494: cytoplasmic stress granule	5.07E-04
8	GO:0008287: protein serine/threonine phosphatase complex	1.16E-03
9	GO:0005768: endosome	1.68E-03
10	GO:0090406: pollen tube	1.89E-03
11	GO:0009506: plasmodesma	3.67E-03
12	GO:0016363: nuclear matrix	4.23E-03
13	GO:0046540: U4/U6 x U5 tri-snRNP complex	6.65E-03
14	GO:0016021: integral component of membrane	6.90E-03
15	GO:0000159: protein phosphatase type 2A complex	1.05E-02
16	GO:0090404: pollen tube tip	1.05E-02
17	GO:0071013: catalytic step 2 spliceosome	1.05E-02
18	GO:0048471: perinuclear region of cytoplasm	1.05E-02
19	GO:0005938: cell cortex	1.26E-02
20	GO:0005802: trans-Golgi network	1.35E-02
21	GO:0005795: Golgi stack	1.49E-02
22	GO:0043234: protein complex	1.61E-02
23	GO:0005875: microtubule associated complex	1.61E-02
24	GO:0005741: mitochondrial outer membrane	1.99E-02
25	GO:0010008: endosome membrane	2.02E-02
26	GO:0005737: cytoplasm	2.03E-02
27	GO:0030136: clathrin-coated vesicle	2.53E-02
28	GO:0005770: late endosome	2.82E-02
29	GO:0005829: cytosol	2.90E-02
30	GO:0009504: cell plate	3.12E-02
31	GO:0000145: exocyst	3.44E-02
32	GO:0005794: Golgi apparatus	3.76E-02
33	GO:0005789: endoplasmic reticulum membrane	4.08E-02
34	GO:0000932: P-body	4.26E-02
35	GO:0005788: endoplasmic reticulum lumen	4.43E-02