co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G53970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009722: detection of cytokinin stimulus	0.00E+00
2	GO:0006593: ornithine catabolic process	0.00E+00
3	GO:0071345: cellular response to cytokine stimulus	0.00E+00
4	GO:0071284: cellular response to lead ion	0.00E+00
5	GO:1903647: negative regulation of chlorophyll catabolic process	0.00E+00
6	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
7	GO:0019477: L-lysine catabolic process	0.00E+00
8	GO:1903409: reactive oxygen species biosynthetic process	0.00E+00
9	GO:0046177: D-gluconate catabolic process	0.00E+00
10	GO:0009398: FMN biosynthetic process	0.00E+00
11	GO:0006073: cellular glucan metabolic process	0.00E+00
12	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
13	GO:0019762: glucosinolate catabolic process	1.16E-05
14	GO:0015996: chlorophyll catabolic process	9.23E-05
15	GO:0000305: response to oxygen radical	1.18E-04
16	GO:0009852: auxin catabolic process	1.18E-04
17	GO:0015812: gamma-aminobutyric acid transport	1.18E-04
18	GO:0019544: arginine catabolic process to glutamate	1.18E-04
19	GO:0006148: inosine catabolic process	1.18E-04
20	GO:0005975: carbohydrate metabolic process	1.95E-04
21	GO:0006099: tricarboxylic acid cycle	2.30E-04
22	GO:2000379: positive regulation of reactive oxygen species metabolic process	2.73E-04
23	GO:0009915: phloem sucrose loading	2.73E-04
24	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	2.73E-04
25	GO:0055114: oxidation-reduction process	3.55E-04
26	GO:0009833: plant-type primary cell wall biogenesis	3.60E-04
27	GO:0006081: cellular aldehyde metabolic process	4.52E-04
28	GO:0044746: amino acid transmembrane export	4.52E-04
29	GO:0015692: lead ion transport	4.52E-04
30	GO:0051646: mitochondrion localization	4.52E-04
31	GO:0043617: cellular response to sucrose starvation	4.52E-04
32	GO:0045493: xylan catabolic process	4.52E-04
33	GO:0080028: nitrile biosynthetic process	6.47E-04
34	GO:0000271: polysaccharide biosynthetic process	7.29E-04
35	GO:0051781: positive regulation of cell division	8.60E-04
36	GO:0006749: glutathione metabolic process	8.60E-04
37	GO:0006542: glutamine biosynthetic process	8.60E-04
38	GO:1901657: glycosyl compound metabolic process	1.08E-03
39	GO:0009697: salicylic acid biosynthetic process	1.08E-03
40	GO:0009651: response to salt stress	1.19E-03
41	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.33E-03
42	GO:0015691: cadmium ion transport	1.33E-03
43	GO:0042732: D-xylose metabolic process	1.33E-03
44	GO:0006828: manganese ion transport	1.33E-03
45	GO:0002238: response to molecule of fungal origin	1.33E-03
46	GO:0006561: proline biosynthetic process	1.33E-03
47	GO:0009816: defense response to bacterium, incompatible interaction	1.44E-03
48	GO:0071555: cell wall organization	1.57E-03
49	GO:0010189: vitamin E biosynthetic process	1.59E-03
50	GO:0010411: xyloglucan metabolic process	1.60E-03
51	GO:0030244: cellulose biosynthetic process	1.77E-03
52	GO:0008272: sulfate transport	1.87E-03
53	GO:0022904: respiratory electron transport chain	1.87E-03
54	GO:0009231: riboflavin biosynthetic process	2.16E-03
55	GO:0016559: peroxisome fission	2.16E-03
56	GO:0010439: regulation of glucosinolate biosynthetic process	2.16E-03
57	GO:0006875: cellular metal ion homeostasis	2.16E-03
58	GO:0006972: hyperosmotic response	2.46E-03
59	GO:0030001: metal ion transport	2.54E-03
60	GO:0006631: fatty acid metabolic process	2.64E-03
61	GO:0009060: aerobic respiration	2.78E-03
62	GO:0006098: pentose-phosphate shunt	2.78E-03
63	GO:0080144: amino acid homeostasis	2.78E-03
64	GO:0046916: cellular transition metal ion homeostasis	2.78E-03
65	GO:0042546: cell wall biogenesis	2.98E-03
66	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	3.12E-03
67	GO:0048354: mucilage biosynthetic process involved in seed coat development	3.12E-03
68	GO:0046686: response to cadmium ion	3.42E-03
69	GO:0010192: mucilage biosynthetic process	3.46E-03
70	GO:0009970: cellular response to sulfate starvation	3.46E-03
71	GO:0009684: indoleacetic acid biosynthetic process	3.82E-03
72	GO:0009809: lignin biosynthetic process	3.84E-03
73	GO:0051603: proteolysis involved in cellular protein catabolic process	3.98E-03
74	GO:0071365: cellular response to auxin stimulus	4.19E-03
75	GO:0006790: sulfur compound metabolic process	4.19E-03
76	GO:0012501: programmed cell death	4.19E-03
77	GO:0002213: defense response to insect	4.19E-03
78	GO:0009725: response to hormone	4.57E-03
79	GO:0006094: gluconeogenesis	4.57E-03
80	GO:0010102: lateral root morphogenesis	4.57E-03
81	GO:0006108: malate metabolic process	4.57E-03
82	GO:0009626: plant-type hypersensitive response	4.83E-03
83	GO:0009266: response to temperature stimulus	4.97E-03
84	GO:0002237: response to molecule of bacterial origin	4.97E-03
85	GO:0046854: phosphatidylinositol phosphorylation	5.37E-03
86	GO:0007031: peroxisome organization	5.37E-03
87	GO:0009624: response to nematode	5.46E-03
88	GO:0006636: unsaturated fatty acid biosynthetic process	5.79E-03
89	GO:0009269: response to desiccation	7.11E-03
90	GO:0006366: transcription from RNA polymerase II promoter	7.11E-03
91	GO:0003333: amino acid transmembrane transport	7.11E-03
92	GO:0035428: hexose transmembrane transport	7.57E-03
93	GO:0016226: iron-sulfur cluster assembly	7.57E-03
94	GO:0009625: response to insect	8.05E-03
95	GO:0010150: leaf senescence	9.43E-03
96	GO:0042335: cuticle development	9.53E-03
97	GO:0042391: regulation of membrane potential	9.53E-03
98	GO:0010087: phloem or xylem histogenesis	9.53E-03
99	GO:0046323: glucose import	1.00E-02
100	GO:0010154: fruit development	1.00E-02
101	GO:0006662: glycerol ether metabolic process	1.00E-02
102	GO:0009646: response to absence of light	1.06E-02
103	GO:0009611: response to wounding	1.10E-02
104	GO:0055072: iron ion homeostasis	1.11E-02
105	GO:0010468: regulation of gene expression	1.13E-02
106	GO:0009617: response to bacterium	1.13E-02
107	GO:0006635: fatty acid beta-oxidation	1.16E-02
108	GO:0019761: glucosinolate biosynthetic process	1.22E-02
109	GO:0010252: auxin homeostasis	1.33E-02
110	GO:0009627: systemic acquired resistance	1.63E-02
111	GO:0042128: nitrate assimilation	1.63E-02
112	GO:0048573: photoperiodism, flowering	1.70E-02
113	GO:0008219: cell death	1.82E-02
114	GO:0009817: defense response to fungus, incompatible interaction	1.82E-02
115	GO:0009813: flavonoid biosynthetic process	1.89E-02
116	GO:0010311: lateral root formation	1.89E-02
117	GO:0010043: response to zinc ion	2.02E-02
118	GO:0010119: regulation of stomatal movement	2.02E-02
119	GO:0045454: cell redox homeostasis	2.18E-02
120	GO:0034599: cellular response to oxidative stress	2.23E-02
121	GO:0042542: response to hydrogen peroxide	2.51E-02
122	GO:0009414: response to water deprivation	2.52E-02
123	GO:0009744: response to sucrose	2.59E-02
124	GO:0042742: defense response to bacterium	2.60E-02
125	GO:0009636: response to toxic substance	2.81E-02
126	GO:0006855: drug transmembrane transport	2.88E-02
127	GO:0031347: regulation of defense response	2.96E-02
128	GO:0042538: hyperosmotic salinity response	3.04E-02
129	GO:0006096: glycolytic process	3.60E-02
130	GO:0048316: seed development	3.68E-02

Rank	GO Term	Adjusted P value
1	GO:0004753: saccharopine dehydrogenase activity	0.00E+00
2	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
3	GO:0008531: riboflavin kinase activity	0.00E+00
4	GO:0047130: saccharopine dehydrogenase (NADP+, L-lysine-forming) activity	0.00E+00
5	GO:0048244: phytanoyl-CoA dioxygenase activity	0.00E+00
6	GO:0001530: lipopolysaccharide binding	0.00E+00
7	GO:0009045: xylose isomerase activity	0.00E+00
8	GO:0080124: pheophytinase activity	0.00E+00
9	GO:0046316: gluconokinase activity	0.00E+00
10	GO:0047131: saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity	0.00E+00
11	GO:0047782: coniferin beta-glucosidase activity	0.00E+00
12	GO:0033961: cis-stilbene-oxide hydrolase activity	0.00E+00
13	GO:0032441: pheophorbide a oxygenase activity	0.00E+00
14	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
15	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
16	GO:0080109: indole-3-acetonitrile nitrile hydratase activity	7.07E-07
17	GO:0080061: indole-3-acetonitrile nitrilase activity	2.67E-06
18	GO:0000257: nitrilase activity	6.29E-06
19	GO:0004462: lactoylglutathione lyase activity	2.95E-05
20	GO:0051213: dioxygenase activity	1.06E-04
21	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.14E-04
22	GO:0016229: steroid dehydrogenase activity	1.18E-04
23	GO:0004347: glucose-6-phosphate isomerase activity	1.18E-04
24	GO:0070401: NADP+ binding	1.18E-04
25	GO:0045437: uridine nucleosidase activity	1.18E-04
26	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.18E-04
27	GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	1.18E-04
28	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.34E-04
29	GO:0102483: scopolin beta-glucosidase activity	1.34E-04
30	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.41E-04
31	GO:0008422: beta-glucosidase activity	2.44E-04
32	GO:0004047: aminomethyltransferase activity	2.73E-04
33	GO:0047724: inosine nucleosidase activity	2.73E-04
34	GO:0003919: FMN adenylyltransferase activity	2.73E-04
35	GO:0047517: 1,4-beta-D-xylan synthase activity	2.73E-04
36	GO:0004362: glutathione-disulfide reductase activity	2.73E-04
37	GO:0004566: beta-glucuronidase activity	2.73E-04
38	GO:0004867: serine-type endopeptidase inhibitor activity	3.23E-04
39	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	4.52E-04
40	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	4.52E-04
41	GO:0010277: chlorophyllide a oxygenase [overall] activity	4.52E-04
42	GO:0016760: cellulose synthase (UDP-forming) activity	5.76E-04
43	GO:0015186: L-glutamine transmembrane transporter activity	6.47E-04
44	GO:0004108: citrate (Si)-synthase activity	6.47E-04
45	GO:0046872: metal ion binding	6.72E-04
46	GO:0004659: prenyltransferase activity	8.60E-04
47	GO:0080032: methyl jasmonate esterase activity	8.60E-04
48	GO:0009044: xylan 1,4-beta-xylosidase activity	8.60E-04
49	GO:0050302: indole-3-acetaldehyde oxidase activity	8.60E-04
50	GO:0004301: epoxide hydrolase activity	8.60E-04
51	GO:0016762: xyloglucan:xyloglucosyl transferase activity	9.58E-04
52	GO:0004197: cysteine-type endopeptidase activity	1.02E-03
53	GO:0004356: glutamate-ammonia ligase activity	1.08E-03
54	GO:0000104: succinate dehydrogenase activity	1.08E-03
55	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.08E-03
56	GO:0051538: 3 iron, 4 sulfur cluster binding	1.08E-03
57	GO:0016759: cellulose synthase activity	1.15E-03
58	GO:0080030: methyl indole-3-acetate esterase activity	1.33E-03
59	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.33E-03
60	GO:0016615: malate dehydrogenase activity	1.33E-03
61	GO:0004866: endopeptidase inhibitor activity	1.33E-03
62	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.59E-03
63	GO:0030060: L-malate dehydrogenase activity	1.59E-03
64	GO:0005261: cation channel activity	1.59E-03
65	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.59E-03
66	GO:0015103: inorganic anion transmembrane transporter activity	1.87E-03
67	GO:0004033: aldo-keto reductase (NADP) activity	2.16E-03
68	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.23E-03
69	GO:0008271: secondary active sulfate transmembrane transporter activity	2.46E-03
70	GO:0046914: transition metal ion binding	2.46E-03
71	GO:0016740: transferase activity	3.04E-03
72	GO:0051537: 2 iron, 2 sulfur cluster binding	3.09E-03
73	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	3.12E-03
74	GO:0005384: manganese ion transmembrane transporter activity	3.12E-03
75	GO:0047372: acylglycerol lipase activity	3.82E-03
76	GO:0015116: sulfate transmembrane transporter activity	4.19E-03
77	GO:0008234: cysteine-type peptidase activity	4.25E-03
78	GO:0030552: cAMP binding	5.37E-03
79	GO:0030553: cGMP binding	5.37E-03
80	GO:0016787: hydrolase activity	5.97E-03
81	GO:0051536: iron-sulfur cluster binding	6.22E-03
82	GO:0031418: L-ascorbic acid binding	6.22E-03
83	GO:0001046: core promoter sequence-specific DNA binding	6.22E-03
84	GO:0005216: ion channel activity	6.66E-03
85	GO:0008324: cation transmembrane transporter activity	6.66E-03
86	GO:0035251: UDP-glucosyltransferase activity	7.11E-03
87	GO:0047134: protein-disulfide reductase activity	9.02E-03
88	GO:0005249: voltage-gated potassium channel activity	9.53E-03
89	GO:0030551: cyclic nucleotide binding	9.53E-03
90	GO:0046873: metal ion transmembrane transporter activity	1.00E-02
91	GO:0004791: thioredoxin-disulfide reductase activity	1.06E-02
92	GO:0005355: glucose transmembrane transporter activity	1.06E-02
93	GO:0042802: identical protein binding	1.20E-02
94	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.28E-02
95	GO:0005507: copper ion binding	1.67E-02
96	GO:0050660: flavin adenine dinucleotide binding	1.69E-02
97	GO:0015238: drug transmembrane transporter activity	1.89E-02
98	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.02E-02
99	GO:0050661: NADP binding	2.37E-02
100	GO:0051539: 4 iron, 4 sulfur cluster binding	2.37E-02
101	GO:0015293: symporter activity	2.81E-02
102	GO:0005198: structural molecule activity	2.81E-02
103	GO:0009055: electron carrier activity	2.88E-02
104	GO:0015171: amino acid transmembrane transporter activity	3.44E-02
105	GO:0016491: oxidoreductase activity	3.66E-02
106	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.68E-02
107	GO:0008289: lipid binding	3.73E-02
108	GO:0008270: zinc ion binding	3.82E-02
109	GO:0022857: transmembrane transporter activity	3.94E-02
110	GO:0015035: protein disulfide oxidoreductase activity	4.19E-02
111	GO:0016746: transferase activity, transferring acyl groups	4.19E-02

Rank	GO Term	Adjusted P value
1	GO:0005759: mitochondrial matrix	1.19E-05
2	GO:0005777: peroxisome	1.01E-04
3	GO:0005615: extracellular space	2.22E-04
4	GO:0045281: succinate dehydrogenase complex	2.73E-04
5	GO:0005764: lysosome	2.87E-04
6	GO:0005737: cytoplasm	8.31E-04
7	GO:0055035: plastid thylakoid membrane	1.08E-03
8	GO:0045273: respiratory chain complex II	2.16E-03
9	GO:0005779: integral component of peroxisomal membrane	2.46E-03
10	GO:0010494: cytoplasmic stress granule	2.78E-03
11	GO:0005773: vacuole	3.24E-03
12	GO:0005829: cytosol	3.43E-03
13	GO:0005765: lysosomal membrane	3.82E-03
14	GO:0005578: proteinaceous extracellular matrix	4.57E-03
15	GO:0048046: apoplast	4.69E-03
16	GO:0005774: vacuolar membrane	1.37E-02
17	GO:0005778: peroxisomal membrane	1.39E-02
18	GO:0000932: P-body	1.51E-02
19	GO:0005794: Golgi apparatus	1.79E-02
20	GO:0019005: SCF ubiquitin ligase complex	1.82E-02
21	GO:0031977: thylakoid lumen	2.44E-02
22	GO:0005576: extracellular region	3.54E-02
23	GO:0005887: integral component of plasma membrane	3.64E-02
24	GO:0009706: chloroplast inner membrane	4.11E-02
25	GO:0010287: plastoglobule	4.64E-02