co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G53000

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0052573: UDP-D-galactose metabolic process	0.00E+00
2	GO:2001142: nicotinate transport	0.00E+00
3	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
4	GO:0032499: detection of peptidoglycan	0.00E+00
5	GO:2001143: N-methylnicotinate transport	0.00E+00
6	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
7	GO:0046398: UDP-glucuronate metabolic process	0.00E+00
8	GO:0032491: detection of molecule of fungal origin	4.31E-05
9	GO:0010015: root morphogenesis	4.36E-05
10	GO:0010372: positive regulation of gibberellin biosynthetic process	1.07E-04
11	GO:0010155: regulation of proton transport	1.07E-04
12	GO:0070475: rRNA base methylation	1.84E-04
13	GO:0080168: abscisic acid transport	1.84E-04
14	GO:0010253: UDP-rhamnose biosynthetic process	1.84E-04
15	GO:0006081: cellular aldehyde metabolic process	1.84E-04
16	GO:0006011: UDP-glucose metabolic process	1.84E-04
17	GO:0009399: nitrogen fixation	2.70E-04
18	GO:0009226: nucleotide-sugar biosynthetic process	2.70E-04
19	GO:0071323: cellular response to chitin	2.70E-04
20	GO:0046686: response to cadmium ion	3.16E-04
21	GO:0033320: UDP-D-xylose biosynthetic process	3.64E-04
22	GO:0033356: UDP-L-arabinose metabolic process	3.64E-04
23	GO:0010107: potassium ion import	3.64E-04
24	GO:0071219: cellular response to molecule of bacterial origin	3.64E-04
25	GO:0009164: nucleoside catabolic process	4.63E-04
26	GO:0030041: actin filament polymerization	4.63E-04
27	GO:0009737: response to abscisic acid	5.58E-04
28	GO:0000470: maturation of LSU-rRNA	5.67E-04
29	GO:0042732: D-xylose metabolic process	5.67E-04
30	GO:0048317: seed morphogenesis	5.67E-04
31	GO:0006796: phosphate-containing compound metabolic process	5.67E-04
32	GO:0009554: megasporogenesis	6.76E-04
33	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	7.90E-04
34	GO:0006402: mRNA catabolic process	9.08E-04
35	GO:2000070: regulation of response to water deprivation	9.08E-04
36	GO:0045010: actin nucleation	9.08E-04
37	GO:0048658: anther wall tapetum development	9.08E-04
38	GO:0008202: steroid metabolic process	1.29E-03
39	GO:0048829: root cap development	1.43E-03
40	GO:0010192: mucilage biosynthetic process	1.43E-03
41	GO:0015770: sucrose transport	1.57E-03
42	GO:0010152: pollen maturation	1.72E-03
43	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.72E-03
44	GO:0000266: mitochondrial fission	1.72E-03
45	GO:0009611: response to wounding	2.02E-03
46	GO:0034605: cellular response to heat	2.03E-03
47	GO:0009225: nucleotide-sugar metabolic process	2.19E-03
48	GO:0005985: sucrose metabolic process	2.19E-03
49	GO:0055085: transmembrane transport	2.66E-03
50	GO:0016998: cell wall macromolecule catabolic process	2.88E-03
51	GO:0007166: cell surface receptor signaling pathway	2.88E-03
52	GO:0030433: ubiquitin-dependent ERAD pathway	3.06E-03
53	GO:0007005: mitochondrion organization	3.06E-03
54	GO:0071215: cellular response to abscisic acid stimulus	3.24E-03
55	GO:0009686: gibberellin biosynthetic process	3.24E-03
56	GO:0019722: calcium-mediated signaling	3.43E-03
57	GO:0006817: phosphate ion transport	3.43E-03
58	GO:0009306: protein secretion	3.43E-03
59	GO:0010214: seed coat development	3.43E-03
60	GO:0042631: cellular response to water deprivation	3.82E-03
61	GO:0010118: stomatal movement	3.82E-03
62	GO:0009960: endosperm development	4.02E-03
63	GO:0006970: response to osmotic stress	4.18E-03
64	GO:0009749: response to glucose	4.43E-03
65	GO:0031047: gene silencing by RNA	4.86E-03
66	GO:0010090: trichome morphogenesis	5.07E-03
67	GO:0006468: protein phosphorylation	5.30E-03
68	GO:0001666: response to hypoxia	5.98E-03
69	GO:0009615: response to virus	5.98E-03
70	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	6.21E-03
71	GO:0048573: photoperiodism, flowering	6.69E-03
72	GO:0009817: defense response to fungus, incompatible interaction	7.19E-03
73	GO:0010311: lateral root formation	7.43E-03
74	GO:0045087: innate immune response	8.47E-03
75	GO:0009873: ethylene-activated signaling pathway	9.14E-03
76	GO:0006839: mitochondrial transport	9.28E-03
77	GO:0008283: cell proliferation	1.01E-02
78	GO:0009965: leaf morphogenesis	1.10E-02
79	GO:0006855: drug transmembrane transport	1.13E-02
80	GO:0009738: abscisic acid-activated signaling pathway	1.22E-02
81	GO:0006364: rRNA processing	1.25E-02
82	GO:0009555: pollen development	1.26E-02
83	GO:0006857: oligopeptide transport	1.31E-02
84	GO:0035556: intracellular signal transduction	1.33E-02
85	GO:0006457: protein folding	1.63E-02
86	GO:0009742: brassinosteroid mediated signaling pathway	1.67E-02
87	GO:0009845: seed germination	1.99E-02
88	GO:0009414: response to water deprivation	2.50E-02
89	GO:0009617: response to bacterium	2.68E-02
90	GO:0015031: protein transport	3.25E-02
91	GO:0009860: pollen tube growth	3.40E-02
92	GO:0009409: response to cold	3.46E-02
93	GO:0007049: cell cycle	3.49E-02
94	GO:0009723: response to ethylene	3.58E-02
95	GO:0048366: leaf development	3.62E-02
96	GO:0080167: response to karrikin	3.76E-02
97	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.85E-02
98	GO:0010200: response to chitin	3.85E-02
99	GO:0016192: vesicle-mediated transport	3.89E-02
100	GO:0046777: protein autophosphorylation	3.94E-02
101	GO:0006869: lipid transport	4.56E-02
102	GO:0009408: response to heat	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity	0.00E+00
2	GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity	0.00E+00
3	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
4	GO:0033721: aldehyde dehydrogenase (NADP+) activity	0.00E+00
5	GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity	0.00E+00
6	GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity	0.00E+00
7	GO:2001080: chitosan binding	0.00E+00
8	GO:0047350: glucuronate-1-phosphate uridylyltransferase activity	0.00E+00
9	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
10	GO:0090416: nicotinate transporter activity	0.00E+00
11	GO:0047631: ADP-ribose diphosphatase activity	3.64E-06
12	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	4.31E-05
13	GO:0090440: abscisic acid transporter activity	4.31E-05
14	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	4.31E-05
15	GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity	4.31E-05
16	GO:0010280: UDP-L-rhamnose synthase activity	1.07E-04
17	GO:0050377: UDP-glucose 4,6-dehydratase activity	1.07E-04
18	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	1.07E-04
19	GO:0008460: dTDP-glucose 4,6-dehydratase activity	1.07E-04
20	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	1.84E-04
21	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	1.84E-04
22	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	2.70E-04
23	GO:0043015: gamma-tubulin binding	3.64E-04
24	GO:0019199: transmembrane receptor protein kinase activity	3.64E-04
25	GO:0018685: alkane 1-monooxygenase activity	4.63E-04
26	GO:0002020: protease binding	4.63E-04
27	GO:0004356: glutamate-ammonia ligase activity	4.63E-04
28	GO:0035673: oligopeptide transmembrane transporter activity	5.67E-04
29	GO:0000210: NAD+ diphosphatase activity	5.67E-04
30	GO:0004029: aldehyde dehydrogenase (NAD) activity	5.67E-04
31	GO:0048040: UDP-glucuronate decarboxylase activity	5.67E-04
32	GO:0070403: NAD+ binding	6.76E-04
33	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	6.76E-04
34	GO:0019900: kinase binding	6.76E-04
35	GO:0008506: sucrose:proton symporter activity	7.90E-04
36	GO:0004427: inorganic diphosphatase activity	7.90E-04
37	GO:0004143: diacylglycerol kinase activity	7.90E-04
38	GO:0008142: oxysterol binding	1.03E-03
39	GO:0003951: NAD+ kinase activity	1.03E-03
40	GO:0003678: DNA helicase activity	1.16E-03
41	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.29E-03
42	GO:0008515: sucrose transmembrane transporter activity	1.57E-03
43	GO:0015198: oligopeptide transporter activity	1.72E-03
44	GO:0008061: chitin binding	2.19E-03
45	GO:0015144: carbohydrate transmembrane transporter activity	2.19E-03
46	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.36E-03
47	GO:0005351: sugar:proton symporter activity	2.47E-03
48	GO:0008017: microtubule binding	2.64E-03
49	GO:0022891: substrate-specific transmembrane transporter activity	3.24E-03
50	GO:0005509: calcium ion binding	4.33E-03
51	GO:0004518: nuclease activity	4.86E-03
52	GO:0030247: polysaccharide binding	6.69E-03
53	GO:0015238: drug transmembrane transporter activity	7.43E-03
54	GO:0004672: protein kinase activity	7.80E-03
55	GO:0004674: protein serine/threonine kinase activity	9.58E-03
56	GO:0043621: protein self-association	1.07E-02
57	GO:0035091: phosphatidylinositol binding	1.07E-02
58	GO:0005524: ATP binding	1.07E-02
59	GO:0015293: symporter activity	1.10E-02
60	GO:0031625: ubiquitin protein ligase binding	1.34E-02
61	GO:0022857: transmembrane transporter activity	1.54E-02
62	GO:0003779: actin binding	1.57E-02
63	GO:0016301: kinase activity	2.02E-02
64	GO:0015297: antiporter activity	2.29E-02
65	GO:0003824: catalytic activity	2.81E-02
66	GO:0000287: magnesium ion binding	3.18E-02
67	GO:0003682: chromatin binding	3.35E-02
68	GO:0003729: mRNA binding	3.80E-02
69	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.27E-02
70	GO:0042803: protein homodimerization activity	4.41E-02
71	GO:0004722: protein serine/threonine phosphatase activity	4.56E-02
72	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.61E-02
73	GO:0003924: GTPase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.29E-07
2	GO:0016442: RISC complex	4.31E-05
3	GO:0090406: pollen tube	4.53E-05
4	GO:0009506: plasmodesma	7.28E-05
5	GO:0016363: nuclear matrix	6.76E-04
6	GO:0016021: integral component of membrane	7.52E-04
7	GO:0010494: cytoplasmic stress granule	1.16E-03
8	GO:0048471: perinuclear region of cytoplasm	1.57E-03
9	GO:0005938: cell cortex	1.87E-03
10	GO:0009524: phragmoplast	1.94E-03
11	GO:0030136: clathrin-coated vesicle	3.63E-03
12	GO:0005770: late endosome	4.02E-03
13	GO:0005829: cytosol	4.42E-03
14	GO:0009504: cell plate	4.43E-03
15	GO:0032580: Golgi cisterna membrane	5.30E-03
16	GO:0005774: vacuolar membrane	5.62E-03
17	GO:0000932: P-body	5.98E-03
18	GO:0005743: mitochondrial inner membrane	6.58E-03
19	GO:0019005: SCF ubiquitin ligase complex	7.19E-03
20	GO:0005794: Golgi apparatus	7.41E-03
21	GO:0016020: membrane	9.25E-03
22	GO:0005730: nucleolus	9.34E-03
23	GO:0031902: late endosome membrane	9.56E-03
24	GO:0005635: nuclear envelope	1.31E-02
25	GO:0010008: endosome membrane	1.44E-02
26	GO:0005783: endoplasmic reticulum	1.62E-02
27	GO:0031225: anchored component of membrane	1.97E-02
28	GO:0005802: trans-Golgi network	2.02E-02
29	GO:0005768: endosome	2.30E-02
30	GO:0005618: cell wall	2.74E-02
31	GO:0046658: anchored component of plasma membrane	2.88E-02
32	GO:0005874: microtubule	3.67E-02