co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G52560

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001143: N-methylnicotinate transport	0.00E+00
2	GO:0034263: positive regulation of autophagy in response to ER overload	0.00E+00
3	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
4	GO:2001142: nicotinate transport	0.00E+00
5	GO:0042353: fucose biosynthetic process	0.00E+00
6	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
7	GO:0010046: response to mycotoxin	0.00E+00
8	GO:0046967: cytosol to ER transport	0.00E+00
9	GO:0009737: response to abscisic acid	6.29E-05
10	GO:0051180: vitamin transport	6.74E-05
11	GO:0030974: thiamine pyrophosphate transport	6.74E-05
12	GO:0006680: glucosylceramide catabolic process	6.74E-05
13	GO:0009966: regulation of signal transduction	6.74E-05
14	GO:0009611: response to wounding	1.10E-04
15	GO:0070588: calcium ion transmembrane transport	1.49E-04
16	GO:2000030: regulation of response to red or far red light	1.62E-04
17	GO:0015893: drug transport	1.62E-04
18	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	2.75E-04
19	GO:0006598: polyamine catabolic process	2.75E-04
20	GO:0080168: abscisic acid transport	2.75E-04
21	GO:0000271: polysaccharide biosynthetic process	3.54E-04
22	GO:0006468: protein phosphorylation	3.96E-04
23	GO:0009399: nitrogen fixation	3.98E-04
24	GO:0072583: clathrin-dependent endocytosis	3.98E-04
25	GO:0033014: tetrapyrrole biosynthetic process	3.98E-04
26	GO:0048530: fruit morphogenesis	3.98E-04
27	GO:0006986: response to unfolded protein	3.98E-04
28	GO:2000114: regulation of establishment of cell polarity	3.98E-04
29	GO:0016310: phosphorylation	4.79E-04
30	GO:0006085: acetyl-CoA biosynthetic process	5.32E-04
31	GO:0010107: potassium ion import	5.32E-04
32	GO:1902347: response to strigolactone	5.32E-04
33	GO:0009694: jasmonic acid metabolic process	5.32E-04
34	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	8.23E-04
35	GO:0010256: endomembrane system organization	8.23E-04
36	GO:0047484: regulation of response to osmotic stress	8.23E-04
37	GO:1900425: negative regulation of defense response to bacterium	8.23E-04
38	GO:1901001: negative regulation of response to salt stress	9.79E-04
39	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	9.79E-04
40	GO:0006970: response to osmotic stress	1.03E-03
41	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.14E-03
42	GO:0006955: immune response	1.14E-03
43	GO:0071669: plant-type cell wall organization or biogenesis	1.14E-03
44	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.14E-03
45	GO:0015937: coenzyme A biosynthetic process	1.14E-03
46	GO:1900150: regulation of defense response to fungus	1.32E-03
47	GO:0048766: root hair initiation	1.32E-03
48	GO:2000070: regulation of response to water deprivation	1.32E-03
49	GO:0060321: acceptance of pollen	1.50E-03
50	GO:0030968: endoplasmic reticulum unfolded protein response	1.50E-03
51	GO:0006783: heme biosynthetic process	1.69E-03
52	GO:0009846: pollen germination	1.72E-03
53	GO:0009585: red, far-red light phototransduction	1.85E-03
54	GO:0006779: porphyrin-containing compound biosynthetic process	1.89E-03
55	GO:0010018: far-red light signaling pathway	1.89E-03
56	GO:0008202: steroid metabolic process	1.89E-03
57	GO:0006782: protoporphyrinogen IX biosynthetic process	2.10E-03
58	GO:0019538: protein metabolic process	2.10E-03
59	GO:0009688: abscisic acid biosynthetic process	2.10E-03
60	GO:0048829: root cap development	2.10E-03
61	GO:0009753: response to jasmonic acid	2.18E-03
62	GO:0010015: root morphogenesis	2.31E-03
63	GO:0000266: mitochondrial fission	2.53E-03
64	GO:0071365: cellular response to auxin stimulus	2.53E-03
65	GO:0009742: brassinosteroid mediated signaling pathway	2.76E-03
66	GO:0048467: gynoecium development	2.99E-03
67	GO:0009969: xyloglucan biosynthetic process	3.23E-03
68	GO:0080188: RNA-directed DNA methylation	3.23E-03
69	GO:0046854: phosphatidylinositol phosphorylation	3.23E-03
70	GO:0009409: response to cold	3.31E-03
71	GO:0042753: positive regulation of circadian rhythm	3.48E-03
72	GO:0009863: salicylic acid mediated signaling pathway	3.73E-03
73	GO:0006338: chromatin remodeling	3.73E-03
74	GO:2000377: regulation of reactive oxygen species metabolic process	3.73E-03
75	GO:0009738: abscisic acid-activated signaling pathway	3.94E-03
76	GO:0009695: jasmonic acid biosynthetic process	3.99E-03
77	GO:0016998: cell wall macromolecule catabolic process	4.26E-03
78	GO:0035556: intracellular signal transduction	4.41E-03
79	GO:0031348: negative regulation of defense response	4.53E-03
80	GO:0019722: calcium-mediated signaling	5.09E-03
81	GO:0006470: protein dephosphorylation	5.11E-03
82	GO:0010118: stomatal movement	5.68E-03
83	GO:0045489: pectin biosynthetic process	5.98E-03
84	GO:0009958: positive gravitropism	5.98E-03
85	GO:0006814: sodium ion transport	6.28E-03
86	GO:0009749: response to glucose	6.60E-03
87	GO:0009851: auxin biosynthetic process	6.60E-03
88	GO:0010193: response to ozone	6.91E-03
89	GO:0009860: pollen tube growth	7.44E-03
90	GO:0009639: response to red or far red light	7.90E-03
91	GO:0006914: autophagy	7.90E-03
92	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.87E-03
93	GO:0009615: response to virus	8.93E-03
94	GO:0046777: protein autophosphorylation	9.17E-03
95	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	9.29E-03
96	GO:0009816: defense response to bacterium, incompatible interaction	9.29E-03
97	GO:0009627: systemic acquired resistance	9.65E-03
98	GO:0015995: chlorophyll biosynthetic process	1.00E-02
99	GO:0048481: plant ovule development	1.08E-02
100	GO:0030244: cellulose biosynthetic process	1.08E-02
101	GO:0010311: lateral root formation	1.11E-02
102	GO:0009832: plant-type cell wall biogenesis	1.11E-02
103	GO:0006811: ion transport	1.15E-02
104	GO:0048527: lateral root development	1.19E-02
105	GO:0010119: regulation of stomatal movement	1.19E-02
106	GO:0009751: response to salicylic acid	1.25E-02
107	GO:0045087: innate immune response	1.27E-02
108	GO:0009408: response to heat	1.27E-02
109	GO:0016051: carbohydrate biosynthetic process	1.27E-02
110	GO:0009651: response to salt stress	1.31E-02
111	GO:0048364: root development	1.32E-02
112	GO:0006839: mitochondrial transport	1.39E-02
113	GO:0009640: photomorphogenesis	1.52E-02
114	GO:0006855: drug transmembrane transport	1.70E-02
115	GO:0006812: cation transport	1.79E-02
116	GO:0006813: potassium ion transport	1.88E-02
117	GO:0010224: response to UV-B	1.93E-02
118	GO:0009620: response to fungus	2.26E-02
119	GO:0018105: peptidyl-serine phosphorylation	2.47E-02
120	GO:0000398: mRNA splicing, via spliceosome	2.68E-02
121	GO:0055085: transmembrane transport	2.86E-02
122	GO:0006457: protein folding	2.92E-02
123	GO:0009845: seed germination	3.00E-02
124	GO:0009790: embryo development	3.17E-02
125	GO:0007623: circadian rhythm	3.57E-02
126	GO:0007166: cell surface receptor signaling pathway	3.92E-02
127	GO:0008380: RNA splicing	4.04E-02
128	GO:0009617: response to bacterium	4.04E-02
129	GO:0009414: response to water deprivation	4.44E-02
130	GO:0071555: cell wall organization	4.55E-02
131	GO:0006979: response to oxidative stress	4.58E-02
132	GO:0006355: regulation of transcription, DNA-templated	4.71E-02
133	GO:0009826: unidimensional cell growth	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0090416: nicotinate transporter activity	0.00E+00
2	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
3	GO:0070566: adenylyltransferase activity	0.00E+00
4	GO:0010293: abscisic aldehyde oxidase activity	0.00E+00
5	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
6	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
7	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
8	GO:0052894: norspermine:oxygen oxidoreductase activity	6.74E-05
9	GO:0090422: thiamine pyrophosphate transporter activity	6.74E-05
10	GO:0015085: calcium ion transmembrane transporter activity	6.74E-05
11	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	6.74E-05
12	GO:0090440: abscisic acid transporter activity	6.74E-05
13	GO:0004348: glucosylceramidase activity	6.74E-05
14	GO:0019888: protein phosphatase regulator activity	1.15E-04
15	GO:0005388: calcium-transporting ATPase activity	1.15E-04
16	GO:0004594: pantothenate kinase activity	1.62E-04
17	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	1.62E-04
18	GO:0004103: choline kinase activity	1.62E-04
19	GO:0008883: glutamyl-tRNA reductase activity	1.62E-04
20	GO:0016301: kinase activity	2.65E-04
21	GO:0046592: polyamine oxidase activity	2.75E-04
22	GO:0046423: allene-oxide cyclase activity	2.75E-04
23	GO:0004383: guanylate cyclase activity	2.75E-04
24	GO:0005524: ATP binding	2.84E-04
25	GO:0001653: peptide receptor activity	3.98E-04
26	GO:0005432: calcium:sodium antiporter activity	3.98E-04
27	GO:0043015: gamma-tubulin binding	5.32E-04
28	GO:0004031: aldehyde oxidase activity	5.32E-04
29	GO:0050302: indole-3-acetaldehyde oxidase activity	5.32E-04
30	GO:0004659: prenyltransferase activity	5.32E-04
31	GO:0018685: alkane 1-monooxygenase activity	6.73E-04
32	GO:0002020: protease binding	6.73E-04
33	GO:0004356: glutamate-ammonia ligase activity	6.73E-04
34	GO:0051753: mannan synthase activity	9.79E-04
35	GO:0019900: kinase binding	9.79E-04
36	GO:0004143: diacylglycerol kinase activity	1.14E-03
37	GO:0019899: enzyme binding	1.14E-03
38	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.18E-03
39	GO:0015491: cation:cation antiporter activity	1.32E-03
40	GO:0008142: oxysterol binding	1.50E-03
41	GO:0004430: 1-phosphatidylinositol 4-kinase activity	1.50E-03
42	GO:0003951: NAD+ kinase activity	1.50E-03
43	GO:0005509: calcium ion binding	1.85E-03
44	GO:0004674: protein serine/threonine kinase activity	1.90E-03
45	GO:0004521: endoribonuclease activity	2.53E-03
46	GO:0008131: primary amine oxidase activity	2.99E-03
47	GO:0004672: protein kinase activity	3.74E-03
48	GO:0004540: ribonuclease activity	4.26E-03
49	GO:0015297: antiporter activity	4.28E-03
50	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.53E-03
51	GO:0008017: microtubule binding	4.68E-03
52	GO:0016760: cellulose synthase (UDP-forming) activity	4.81E-03
53	GO:0022891: substrate-specific transmembrane transporter activity	4.81E-03
54	GO:0030276: clathrin binding	5.98E-03
55	GO:0046872: metal ion binding	6.25E-03
56	GO:0005516: calmodulin binding	6.90E-03
57	GO:0016759: cellulose synthase activity	7.90E-03
58	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.65E-03
59	GO:0004721: phosphoprotein phosphatase activity	1.00E-02
60	GO:0004683: calmodulin-dependent protein kinase activity	1.00E-02
61	GO:0015238: drug transmembrane transporter activity	1.11E-02
62	GO:0004722: protein serine/threonine phosphatase activity	1.13E-02
63	GO:0003824: catalytic activity	1.13E-02
64	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.19E-02
65	GO:0016757: transferase activity, transferring glycosyl groups	1.33E-02
66	GO:0050661: NADP binding	1.39E-02
67	GO:0051539: 4 iron, 4 sulfur cluster binding	1.39E-02
68	GO:0051537: 2 iron, 2 sulfur cluster binding	1.61E-02
69	GO:0043621: protein self-association	1.61E-02
70	GO:0035091: phosphatidylinositol binding	1.61E-02
71	GO:0031625: ubiquitin protein ligase binding	2.02E-02
72	GO:0022857: transmembrane transporter activity	2.31E-02
73	GO:0016758: transferase activity, transferring hexosyl groups	2.78E-02
74	GO:0015144: carbohydrate transmembrane transporter activity	3.22E-02
75	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.39E-02
76	GO:0005351: sugar:proton symporter activity	3.51E-02
77	GO:0005525: GTP binding	3.71E-02
78	GO:0005506: iron ion binding	4.48E-02
79	GO:0044212: transcription regulatory region DNA binding	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0045334: clathrin-coated endocytic vesicle	6.74E-05
2	GO:0019008: molybdopterin synthase complex	6.74E-05
3	GO:0005886: plasma membrane	2.42E-04
4	GO:0031011: Ino80 complex	6.73E-04
5	GO:0005737: cytoplasm	8.39E-04
6	GO:0030173: integral component of Golgi membrane	9.79E-04
7	GO:0016363: nuclear matrix	9.79E-04
8	GO:0015030: Cajal body	1.89E-03
9	GO:0000159: protein phosphatase type 2A complex	2.31E-03
10	GO:0030136: clathrin-coated vesicle	5.38E-03
11	GO:0005770: late endosome	5.98E-03
12	GO:0009504: cell plate	6.60E-03
13	GO:0016020: membrane	6.67E-03
14	GO:0000145: exocyst	7.24E-03
15	GO:0032580: Golgi cisterna membrane	7.90E-03
16	GO:0005778: peroxisomal membrane	8.24E-03
17	GO:0005794: Golgi apparatus	8.54E-03
18	GO:0005829: cytosol	8.69E-03
19	GO:0009707: chloroplast outer membrane	1.08E-02
20	GO:0009506: plasmodesma	1.31E-02
21	GO:0043231: intracellular membrane-bounded organelle	1.40E-02
22	GO:0031902: late endosome membrane	1.44E-02
23	GO:0090406: pollen tube	1.52E-02
24	GO:0005887: integral component of plasma membrane	1.72E-02
25	GO:0005789: endoplasmic reticulum membrane	1.72E-02
26	GO:0005681: spliceosomal complex	2.12E-02
27	GO:0005834: heterotrimeric G-protein complex	2.22E-02
28	GO:0005777: peroxisome	2.59E-02
29	GO:0005623: cell	2.89E-02
30	GO:0005759: mitochondrial matrix	3.33E-02
31	GO:0005802: trans-Golgi network	3.61E-02
32	GO:0005768: endosome	4.10E-02
33	GO:0046658: anchored component of plasma membrane	4.35E-02
34	GO:0005774: vacuolar membrane	4.76E-02