Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G52310

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1904526: regulation of microtubule binding0.00E+00
2GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
3GO:0010378: temperature compensation of the circadian clock0.00E+00
4GO:0007141: male meiosis I0.00E+00
5GO:0010046: response to mycotoxin0.00E+00
6GO:0009667: plastid inner membrane organization0.00E+00
7GO:1905499: trichome papilla formation0.00E+00
8GO:0019593: mannitol biosynthetic process0.00E+00
9GO:0009409: response to cold3.61E-10
10GO:0042335: cuticle development1.27E-09
11GO:0009737: response to abscisic acid1.71E-09
12GO:0010025: wax biosynthetic process4.47E-09
13GO:0006633: fatty acid biosynthetic process7.30E-08
14GO:0009631: cold acclimation1.78E-06
15GO:0000038: very long-chain fatty acid metabolic process2.33E-06
16GO:2000070: regulation of response to water deprivation1.89E-05
17GO:0070417: cellular response to cold3.70E-05
18GO:0009873: ethylene-activated signaling pathway1.26E-04
19GO:0010143: cutin biosynthetic process1.43E-04
20GO:0006665: sphingolipid metabolic process1.64E-04
21GO:0035435: phosphate ion transmembrane transport2.34E-04
22GO:0045926: negative regulation of growth3.15E-04
23GO:0006970: response to osmotic stress4.03E-04
24GO:0050829: defense response to Gram-negative bacterium4.06E-04
25GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.06E-04
26GO:0051180: vitamin transport4.26E-04
27GO:0030974: thiamine pyrophosphate transport4.26E-04
28GO:0009865: pollen tube adhesion4.26E-04
29GO:0015812: gamma-aminobutyric acid transport4.26E-04
30GO:0006680: glucosylceramide catabolic process4.26E-04
31GO:0080051: cutin transport4.26E-04
32GO:0033481: galacturonate biosynthetic process4.26E-04
33GO:0034472: snRNA 3'-end processing4.26E-04
34GO:0006631: fatty acid metabolic process4.58E-04
35GO:0009819: drought recovery5.08E-04
36GO:0009415: response to water5.08E-04
37GO:0009414: response to water deprivation5.29E-04
38GO:0048868: pollen tube development5.76E-04
39GO:0010200: response to chitin5.77E-04
40GO:0050832: defense response to fungus5.83E-04
41GO:0009749: response to glucose6.92E-04
42GO:0009809: lignin biosynthetic process8.23E-04
43GO:0042761: very long-chain fatty acid biosynthetic process8.75E-04
44GO:1901679: nucleotide transmembrane transport9.21E-04
45GO:0015786: UDP-glucose transport9.21E-04
46GO:2000030: regulation of response to red or far red light9.21E-04
47GO:0015908: fatty acid transport9.21E-04
48GO:0006898: receptor-mediated endocytosis9.21E-04
49GO:0015893: drug transport9.21E-04
50GO:0015709: thiosulfate transport9.21E-04
51GO:0071422: succinate transmembrane transport9.21E-04
52GO:0031407: oxylipin metabolic process9.21E-04
53GO:0010289: homogalacturonan biosynthetic process9.21E-04
54GO:0009416: response to light stimulus1.08E-03
55GO:0009611: response to wounding1.13E-03
56GO:0030148: sphingolipid biosynthetic process1.17E-03
57GO:0010015: root morphogenesis1.17E-03
58GO:0005983: starch catabolic process1.34E-03
59GO:0042545: cell wall modification1.34E-03
60GO:0080168: abscisic acid transport1.50E-03
61GO:0046168: glycerol-3-phosphate catabolic process1.50E-03
62GO:0016045: detection of bacterium1.50E-03
63GO:0010359: regulation of anion channel activity1.50E-03
64GO:0080121: AMP transport1.50E-03
65GO:0090630: activation of GTPase activity1.50E-03
66GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid1.50E-03
67GO:0006081: cellular aldehyde metabolic process1.50E-03
68GO:0015783: GDP-fucose transport1.50E-03
69GO:0010325: raffinose family oligosaccharide biosynthetic process1.50E-03
70GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'1.50E-03
71GO:0006811: ion transport1.90E-03
72GO:0070588: calcium ion transmembrane transport1.92E-03
73GO:0009833: plant-type primary cell wall biogenesis2.14E-03
74GO:0072334: UDP-galactose transmembrane transport2.17E-03
75GO:0006072: glycerol-3-phosphate metabolic process2.17E-03
76GO:0010104: regulation of ethylene-activated signaling pathway2.17E-03
77GO:0010031: circumnutation2.17E-03
78GO:0009413: response to flooding2.17E-03
79GO:0051259: protein oligomerization2.17E-03
80GO:0006624: vacuolar protein processing2.17E-03
81GO:0015729: oxaloacetate transport2.17E-03
82GO:0006839: mitochondrial transport2.68E-03
83GO:0006536: glutamate metabolic process2.91E-03
84GO:0022622: root system development2.91E-03
85GO:0006552: leucine catabolic process2.91E-03
86GO:0015867: ATP transport2.91E-03
87GO:0009694: jasmonic acid metabolic process2.91E-03
88GO:0010222: stem vascular tissue pattern formation2.91E-03
89GO:0046345: abscisic acid catabolic process2.91E-03
90GO:0051365: cellular response to potassium ion starvation2.91E-03
91GO:0071585: detoxification of cadmium ion2.91E-03
92GO:0045490: pectin catabolic process3.24E-03
93GO:0001944: vasculature development3.45E-03
94GO:0009247: glycolipid biosynthetic process3.73E-03
95GO:0006873: cellular ion homeostasis3.73E-03
96GO:0071423: malate transmembrane transport3.73E-03
97GO:0048578: positive regulation of long-day photoperiodism, flowering3.73E-03
98GO:0042631: cellular response to water deprivation4.40E-03
99GO:0047484: regulation of response to osmotic stress4.61E-03
100GO:0045962: positive regulation of development, heterochronic4.61E-03
101GO:1900425: negative regulation of defense response to bacterium4.61E-03
102GO:0006574: valine catabolic process4.61E-03
103GO:0015866: ADP transport4.61E-03
104GO:0048232: male gamete generation4.61E-03
105GO:0009913: epidermal cell differentiation4.61E-03
106GO:0005975: carbohydrate metabolic process4.62E-03
107GO:0045489: pectin biosynthetic process4.74E-03
108GO:0071555: cell wall organization5.07E-03
109GO:0009651: response to salt stress5.23E-03
110GO:1901001: negative regulation of response to salt stress5.57E-03
111GO:0009082: branched-chain amino acid biosynthetic process5.57E-03
112GO:0098655: cation transmembrane transport5.57E-03
113GO:0009861: jasmonic acid and ethylene-dependent systemic resistance5.57E-03
114GO:0000302: response to reactive oxygen species5.86E-03
115GO:0030497: fatty acid elongation6.58E-03
116GO:0008272: sulfate transport6.58E-03
117GO:0030307: positive regulation of cell growth6.58E-03
118GO:0032880: regulation of protein localization6.58E-03
119GO:0006401: RNA catabolic process6.58E-03
120GO:0009610: response to symbiotic fungus6.58E-03
121GO:0045995: regulation of embryonic development6.58E-03
122GO:0006310: DNA recombination7.11E-03
123GO:0009624: response to nematode7.20E-03
124GO:0006904: vesicle docking involved in exocytosis7.55E-03
125GO:0010286: heat acclimation7.55E-03
126GO:0008610: lipid biosynthetic process7.65E-03
127GO:0019375: galactolipid biosynthetic process7.65E-03
128GO:0051276: chromosome organization7.65E-03
129GO:0050821: protein stabilization7.65E-03
130GO:0007155: cell adhesion7.65E-03
131GO:0080167: response to karrikin8.75E-03
132GO:0009827: plant-type cell wall modification8.79E-03
133GO:0010029: regulation of seed germination8.98E-03
134GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.98E-03
135GO:0006974: cellular response to DNA damage stimulus9.49E-03
136GO:0090305: nucleic acid phosphodiester bond hydrolysis9.98E-03
137GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay9.98E-03
138GO:0019432: triglyceride biosynthetic process9.98E-03
139GO:0010345: suberin biosynthetic process9.98E-03
140GO:0098656: anion transmembrane transport9.98E-03
141GO:0048481: plant ovule development1.11E-02
142GO:0030244: cellulose biosynthetic process1.11E-02
143GO:2000280: regulation of root development1.12E-02
144GO:0048268: clathrin coat assembly1.12E-02
145GO:0009790: embryo development1.17E-02
146GO:0051026: chiasma assembly1.25E-02
147GO:0055062: phosphate ion homeostasis1.25E-02
148GO:0052544: defense response by callose deposition in cell wall1.39E-02
149GO:0009637: response to blue light1.41E-02
150GO:0010150: leaf senescence1.45E-02
151GO:0016042: lipid catabolic process1.51E-02
152GO:0006820: anion transport1.53E-02
153GO:0016024: CDP-diacylglycerol biosynthetic process1.53E-02
154GO:0010105: negative regulation of ethylene-activated signaling pathway1.53E-02
155GO:0045037: protein import into chloroplast stroma1.53E-02
156GO:0071365: cellular response to auxin stimulus1.53E-02
157GO:0009751: response to salicylic acid1.54E-02
158GO:0010588: cotyledon vascular tissue pattern formation1.67E-02
159GO:2000012: regulation of auxin polar transport1.67E-02
160GO:0050826: response to freezing1.67E-02
161GO:0018107: peptidyl-threonine phosphorylation1.67E-02
162GO:0009725: response to hormone1.67E-02
163GO:0005986: sucrose biosynthetic process1.67E-02
164GO:0006470: protein dephosphorylation1.72E-02
165GO:0042542: response to hydrogen peroxide1.75E-02
166GO:0009753: response to jasmonic acid1.75E-02
167GO:0055085: transmembrane transport1.80E-02
168GO:0048440: carpel development1.82E-02
169GO:0009744: response to sucrose1.82E-02
170GO:0051707: response to other organism1.82E-02
171GO:0048467: gynoecium development1.82E-02
172GO:0006457: protein folding1.86E-02
173GO:0009644: response to high light intensity1.97E-02
174GO:0010030: positive regulation of seed germination1.98E-02
175GO:0009225: nucleotide-sugar metabolic process1.98E-02
176GO:0006636: unsaturated fatty acid biosynthetic process2.14E-02
177GO:0006071: glycerol metabolic process2.14E-02
178GO:0006260: DNA replication2.21E-02
179GO:0042538: hyperosmotic salinity response2.29E-02
180GO:0030150: protein import into mitochondrial matrix2.30E-02
181GO:2000377: regulation of reactive oxygen species metabolic process2.30E-02
182GO:0006364: rRNA processing2.46E-02
183GO:0009585: red, far-red light phototransduction2.46E-02
184GO:0009695: jasmonic acid biosynthetic process2.47E-02
185GO:0031408: oxylipin biosynthetic process2.64E-02
186GO:0003333: amino acid transmembrane transport2.64E-02
187GO:0016998: cell wall macromolecule catabolic process2.64E-02
188GO:0051260: protein homooligomerization2.64E-02
189GO:0010431: seed maturation2.64E-02
190GO:0010017: red or far-red light signaling pathway2.82E-02
191GO:0007131: reciprocal meiotic recombination2.82E-02
192GO:0031348: negative regulation of defense response2.82E-02
193GO:0071215: cellular response to abscisic acid stimulus3.00E-02
194GO:0048367: shoot system development3.01E-02
195GO:0010091: trichome branching3.18E-02
196GO:0019722: calcium-mediated signaling3.18E-02
197GO:0008284: positive regulation of cell proliferation3.37E-02
198GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.43E-02
199GO:0000226: microtubule cytoskeleton organization3.56E-02
200GO:0000271: polysaccharide biosynthetic process3.56E-02
201GO:0010501: RNA secondary structure unwinding3.56E-02
202GO:0048653: anther development3.56E-02
203GO:0009958: positive gravitropism3.75E-02
204GO:0010268: brassinosteroid homeostasis3.75E-02
205GO:0006814: sodium ion transport3.95E-02
206GO:0042752: regulation of circadian rhythm3.95E-02
207GO:0019252: starch biosynthetic process4.15E-02
208GO:0008654: phospholipid biosynthetic process4.15E-02
209GO:0045892: negative regulation of transcription, DNA-templated4.18E-02
210GO:0010193: response to ozone4.36E-02
211GO:0016132: brassinosteroid biosynthetic process4.36E-02
212GO:0030154: cell differentiation4.51E-02
213GO:0006869: lipid transport4.59E-02
214GO:0010090: trichome morphogenesis4.78E-02
215GO:0009639: response to red or far red light4.99E-02
216GO:0016125: sterol metabolic process4.99E-02
RankGO TermAdjusted P value
1GO:0008419: RNA lariat debranching enzyme activity0.00E+00
2GO:0033721: aldehyde dehydrogenase (NADP+) activity0.00E+00
3GO:0052631: sphingolipid delta-8 desaturase activity0.00E+00
4GO:0010303: limit dextrinase activity0.00E+00
5GO:0070566: adenylyltransferase activity0.00E+00
6GO:0017048: Rho GTPase binding0.00E+00
7GO:0005534: galactose binding0.00E+00
8GO:0051060: pullulanase activity0.00E+00
9GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
10GO:0080123: jasmonate-amino synthetase activity0.00E+00
11GO:0009922: fatty acid elongase activity3.84E-11
12GO:0102336: 3-oxo-arachidoyl-CoA synthase activity6.50E-11
13GO:0102337: 3-oxo-cerotoyl-CoA synthase activity6.50E-11
14GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity6.50E-11
15GO:0070330: aromatase activity7.87E-08
16GO:0018685: alkane 1-monooxygenase activity2.44E-06
17GO:0052747: sinapyl alcohol dehydrogenase activity1.89E-05
18GO:0045551: cinnamyl-alcohol dehydrogenase activity9.79E-05
19GO:0004556: alpha-amylase activity2.34E-04
20GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.34E-04
21GO:0016746: transferase activity, transferring acyl groups2.71E-04
22GO:0004348: glucosylceramidase activity4.26E-04
23GO:0015185: gamma-aminobutyric acid transmembrane transporter activity4.26E-04
24GO:0015245: fatty acid transporter activity4.26E-04
25GO:0090440: abscisic acid transporter activity4.26E-04
26GO:0031957: very long-chain fatty acid-CoA ligase activity4.26E-04
27GO:0090422: thiamine pyrophosphate transporter activity4.26E-04
28GO:0015297: antiporter activity6.45E-04
29GO:1901677: phosphate transmembrane transporter activity9.21E-04
30GO:0015180: L-alanine transmembrane transporter activity9.21E-04
31GO:0015117: thiosulfate transmembrane transporter activity9.21E-04
32GO:0016629: 12-oxophytodienoate reductase activity9.21E-04
33GO:0001047: core promoter binding9.21E-04
34GO:0042389: omega-3 fatty acid desaturase activity9.21E-04
35GO:0017040: ceramidase activity9.21E-04
36GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity9.21E-04
37GO:0045330: aspartyl esterase activity9.59E-04
38GO:0030599: pectinesterase activity1.28E-03
39GO:0005310: dicarboxylic acid transmembrane transporter activity1.50E-03
40GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.50E-03
41GO:0015141: succinate transmembrane transporter activity1.50E-03
42GO:0046423: allene-oxide cyclase activity1.50E-03
43GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.50E-03
44GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity1.50E-03
45GO:0005457: GDP-fucose transmembrane transporter activity1.50E-03
46GO:0047274: galactinol-sucrose galactosyltransferase activity1.50E-03
47GO:0015131: oxaloacetate transmembrane transporter activity2.17E-03
48GO:0035250: UDP-galactosyltransferase activity2.17E-03
49GO:0003883: CTP synthase activity2.17E-03
50GO:0015181: arginine transmembrane transporter activity2.17E-03
51GO:0005460: UDP-glucose transmembrane transporter activity2.17E-03
52GO:0052656: L-isoleucine transaminase activity2.17E-03
53GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity2.17E-03
54GO:0005432: calcium:sodium antiporter activity2.17E-03
55GO:0052654: L-leucine transaminase activity2.17E-03
56GO:0004351: glutamate decarboxylase activity2.17E-03
57GO:0052655: L-valine transaminase activity2.17E-03
58GO:0015189: L-lysine transmembrane transporter activity2.17E-03
59GO:0005313: L-glutamate transmembrane transporter activity2.91E-03
60GO:0004084: branched-chain-amino-acid transaminase activity2.91E-03
61GO:0050378: UDP-glucuronate 4-epimerase activity2.91E-03
62GO:0005459: UDP-galactose transmembrane transporter activity3.73E-03
63GO:0080122: AMP transmembrane transporter activity3.73E-03
64GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.73E-03
65GO:0008381: mechanically-gated ion channel activity3.73E-03
66GO:0004029: aldehyde dehydrogenase (NAD) activity4.61E-03
67GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.61E-03
68GO:0009378: four-way junction helicase activity4.61E-03
69GO:0043140: ATP-dependent 3'-5' DNA helicase activity4.61E-03
70GO:0043138: 3'-5' DNA helicase activity5.57E-03
71GO:0102391: decanoate--CoA ligase activity5.57E-03
72GO:0004144: diacylglycerol O-acyltransferase activity5.57E-03
73GO:0005347: ATP transmembrane transporter activity5.57E-03
74GO:0004435: phosphatidylinositol phospholipase C activity5.57E-03
75GO:0015217: ADP transmembrane transporter activity5.57E-03
76GO:0016621: cinnamoyl-CoA reductase activity6.58E-03
77GO:0019899: enzyme binding6.58E-03
78GO:0015140: malate transmembrane transporter activity6.58E-03
79GO:0004467: long-chain fatty acid-CoA ligase activity6.58E-03
80GO:0016791: phosphatase activity7.11E-03
81GO:0015491: cation:cation antiporter activity7.65E-03
82GO:0015288: porin activity7.65E-03
83GO:0008289: lipid binding7.81E-03
84GO:0005516: calmodulin binding8.16E-03
85GO:0008308: voltage-gated anion channel activity8.79E-03
86GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.79E-03
87GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors9.98E-03
88GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.06E-02
89GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.12E-02
90GO:0005096: GTPase activator activity1.17E-02
91GO:0004864: protein phosphatase inhibitor activity1.25E-02
92GO:0005545: 1-phosphatidylinositol binding1.25E-02
93GO:0004722: protein serine/threonine phosphatase activity1.32E-02
94GO:0003680: AT DNA binding1.39E-02
95GO:0015116: sulfate transmembrane transporter activity1.53E-02
96GO:0015114: phosphate ion transmembrane transporter activity1.67E-02
97GO:0005388: calcium-transporting ATPase activity1.67E-02
98GO:0000175: 3'-5'-exoribonuclease activity1.67E-02
99GO:0015266: protein channel activity1.67E-02
100GO:0005262: calcium channel activity1.67E-02
101GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.82E-02
102GO:0008083: growth factor activity1.82E-02
103GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.92E-02
104GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.96E-02
105GO:0016788: hydrolase activity, acting on ester bonds2.57E-02
106GO:0004540: ribonuclease activity2.64E-02
107GO:0004707: MAP kinase activity2.64E-02
108GO:0015171: amino acid transmembrane transporter activity2.73E-02
109GO:0031625: ubiquitin protein ligase binding2.73E-02
110GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.82E-02
111GO:0016760: cellulose synthase (UDP-forming) activity3.00E-02
112GO:0018024: histone-lysine N-methyltransferase activity3.37E-02
113GO:0043565: sequence-specific DNA binding3.41E-02
114GO:0052689: carboxylic ester hydrolase activity3.72E-02
115GO:0030276: clathrin binding3.75E-02
116GO:0044212: transcription regulatory region DNA binding3.93E-02
117GO:0010181: FMN binding3.95E-02
118GO:0004872: receptor activity4.15E-02
119GO:0016762: xyloglucan:xyloglucosyl transferase activity4.36E-02
120GO:0004518: nuclease activity4.57E-02
121GO:0004197: cysteine-type endopeptidase activity4.57E-02
122GO:0016759: cellulose synthase activity4.99E-02
RankGO TermAdjusted P value
1GO:0032039: integrator complex0.00E+00
2GO:0034426: etioplast membrane0.00E+00
3GO:0046658: anchored component of plasma membrane4.33E-06
4GO:0016021: integral component of membrane5.69E-05
5GO:0009505: plant-type cell wall3.35E-04
6GO:0070382: exocytic vesicle4.26E-04
7GO:0009923: fatty acid elongase complex4.26E-04
8GO:0031225: anchored component of membrane9.17E-04
9GO:0031357: integral component of chloroplast inner membrane9.21E-04
10GO:0042170: plastid membrane9.21E-04
11GO:0005886: plasma membrane1.25E-03
12GO:0009897: external side of plasma membrane1.50E-03
13GO:0009331: glycerol-3-phosphate dehydrogenase complex2.17E-03
14GO:0045177: apical part of cell2.17E-03
15GO:0009527: plastid outer membrane2.91E-03
16GO:0005618: cell wall3.48E-03
17GO:0000178: exosome (RNase complex)3.73E-03
18GO:0005783: endoplasmic reticulum3.73E-03
19GO:0005743: mitochondrial inner membrane3.86E-03
20GO:0005789: endoplasmic reticulum membrane4.69E-03
21GO:0000145: exocyst6.26E-03
22GO:0005694: chromosome6.26E-03
23GO:0071944: cell periphery6.67E-03
24GO:0016020: membrane7.13E-03
25GO:0005778: peroxisomal membrane7.55E-03
26GO:0031305: integral component of mitochondrial inner membrane7.65E-03
27GO:0005811: lipid particle8.79E-03
28GO:0046930: pore complex8.79E-03
29GO:0016604: nuclear body1.12E-02
30GO:0005768: endosome1.18E-02
31GO:0009941: chloroplast envelope1.29E-02
32GO:0005938: cell cortex1.67E-02
33GO:0090406: pollen tube1.82E-02
34GO:0005905: clathrin-coated pit2.64E-02
35GO:0005802: trans-Golgi network2.67E-02
36GO:0005744: mitochondrial inner membrane presequence translocase complex3.18E-02
37GO:0000790: nuclear chromatin3.37E-02
38GO:0030136: clathrin-coated vesicle3.37E-02
39GO:0009706: chloroplast inner membrane3.50E-02
40GO:0005770: late endosome3.75E-02
41GO:0005654: nucleoplasm4.26E-02
42GO:0009506: plasmodesma4.94E-02
43GO:0032580: Golgi cisterna membrane4.99E-02
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Gene type



Gene DE type