co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G52060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071289: cellular response to nickel ion	0.00E+00
2	GO:0006862: nucleotide transport	0.00E+00
3	GO:0042353: fucose biosynthetic process	0.00E+00
4	GO:0032497: detection of lipopolysaccharide	0.00E+00
5	GO:0060416: response to growth hormone	0.00E+00
6	GO:0010046: response to mycotoxin	0.00E+00
7	GO:1905499: trichome papilla formation	0.00E+00
8	GO:0019593: mannitol biosynthetic process	0.00E+00
9	GO:0010200: response to chitin	7.90E-12
10	GO:0042335: cuticle development	2.12E-05
11	GO:0002679: respiratory burst involved in defense response	3.96E-05
12	GO:0006952: defense response	6.01E-05
13	GO:0006665: sphingolipid metabolic process	1.11E-04
14	GO:0009611: response to wounding	1.18E-04
15	GO:0009695: jasmonic acid biosynthetic process	1.60E-04
16	GO:0009873: ethylene-activated signaling pathway	2.27E-04
17	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.83E-04
18	GO:0019510: S-adenosylhomocysteine catabolic process	3.34E-04
19	GO:0051180: vitamin transport	3.34E-04
20	GO:0030974: thiamine pyrophosphate transport	3.34E-04
21	GO:0050691: regulation of defense response to virus by host	3.34E-04
22	GO:0006680: glucosylceramide catabolic process	3.34E-04
23	GO:0033481: galacturonate biosynthetic process	3.34E-04
24	GO:0034472: snRNA 3'-end processing	3.34E-04
25	GO:2000070: regulation of response to water deprivation	3.55E-04
26	GO:0048544: recognition of pollen	3.99E-04
27	GO:0051865: protein autoubiquitination	5.24E-04
28	GO:0009737: response to abscisic acid	5.41E-04
29	GO:0006468: protein phosphorylation	6.60E-04
30	GO:0031407: oxylipin metabolic process	7.29E-04
31	GO:0042754: negative regulation of circadian rhythm	7.29E-04
32	GO:0010289: homogalacturonan biosynthetic process	7.29E-04
33	GO:0010372: positive regulation of gibberellin biosynthetic process	7.29E-04
34	GO:2000030: regulation of response to red or far red light	7.29E-04
35	GO:0006898: receptor-mediated endocytosis	7.29E-04
36	GO:0015893: drug transport	7.29E-04
37	GO:0033353: S-adenosylmethionine cycle	7.29E-04
38	GO:0080148: negative regulation of response to water deprivation	7.29E-04
39	GO:0010507: negative regulation of autophagy	7.29E-04
40	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.18E-03
41	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	1.18E-03
42	GO:0080168: abscisic acid transport	1.18E-03
43	GO:0006598: polyamine catabolic process	1.18E-03
44	GO:0016045: detection of bacterium	1.18E-03
45	GO:0010359: regulation of anion channel activity	1.18E-03
46	GO:0010288: response to lead ion	1.18E-03
47	GO:0010253: UDP-rhamnose biosynthetic process	1.18E-03
48	GO:0006081: cellular aldehyde metabolic process	1.18E-03
49	GO:0070588: calcium ion transmembrane transport	1.35E-03
50	GO:0010025: wax biosynthetic process	1.50E-03
51	GO:0009863: salicylic acid mediated signaling pathway	1.66E-03
52	GO:0030100: regulation of endocytosis	1.70E-03
53	GO:0009399: nitrogen fixation	1.70E-03
54	GO:0033014: tetrapyrrole biosynthetic process	1.70E-03
55	GO:0031408: oxylipin biosynthetic process	2.02E-03
56	GO:0006536: glutamate metabolic process	2.28E-03
57	GO:0006749: glutathione metabolic process	2.28E-03
58	GO:1902347: response to strigolactone	2.28E-03
59	GO:0009694: jasmonic acid metabolic process	2.28E-03
60	GO:0009686: gibberellin biosynthetic process	2.41E-03
61	GO:0010091: trichome branching	2.62E-03
62	GO:0009247: glycolipid biosynthetic process	2.91E-03
63	GO:0048359: mucilage metabolic process involved in seed coat development	2.91E-03
64	GO:0009823: cytokinin catabolic process	2.91E-03
65	GO:0045487: gibberellin catabolic process	2.91E-03
66	GO:0048497: maintenance of floral organ identity	2.91E-03
67	GO:0045489: pectin biosynthetic process	3.30E-03
68	GO:0010256: endomembrane system organization	3.60E-03
69	GO:0006796: phosphate-containing compound metabolic process	3.60E-03
70	GO:0006751: glutathione catabolic process	3.60E-03
71	GO:0009620: response to fungus	4.04E-03
72	GO:0010193: response to ozone	4.08E-03
73	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.33E-03
74	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	4.33E-03
75	GO:0080167: response to karrikin	5.03E-03
76	GO:0006401: RNA catabolic process	5.11E-03
77	GO:0006955: immune response	5.11E-03
78	GO:0030497: fatty acid elongation	5.11E-03
79	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	5.11E-03
80	GO:0050829: defense response to Gram-negative bacterium	5.11E-03
81	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.29E-03
82	GO:0007155: cell adhesion	5.94E-03
83	GO:0006402: mRNA catabolic process	5.94E-03
84	GO:1900150: regulation of defense response to fungus	5.94E-03
85	GO:0009690: cytokinin metabolic process	5.94E-03
86	GO:0019375: galactolipid biosynthetic process	5.94E-03
87	GO:0009704: de-etiolation	5.94E-03
88	GO:0045010: actin nucleation	5.94E-03
89	GO:0046686: response to cadmium ion	5.98E-03
90	GO:0016310: phosphorylation	6.02E-03
91	GO:0009414: response to water deprivation	6.80E-03
92	GO:0009699: phenylpropanoid biosynthetic process	6.81E-03
93	GO:0009932: cell tip growth	6.81E-03
94	GO:0015780: nucleotide-sugar transport	7.73E-03
95	GO:0010345: suberin biosynthetic process	7.73E-03
96	GO:0098656: anion transmembrane transport	7.73E-03
97	GO:0006783: heme biosynthetic process	7.73E-03
98	GO:0006633: fatty acid biosynthetic process	8.07E-03
99	GO:0006811: ion transport	8.49E-03
100	GO:0006779: porphyrin-containing compound biosynthetic process	8.68E-03
101	GO:0042761: very long-chain fatty acid biosynthetic process	8.68E-03
102	GO:2000280: regulation of root development	8.68E-03
103	GO:0010192: mucilage biosynthetic process	9.69E-03
104	GO:0006782: protoporphyrinogen IX biosynthetic process	9.69E-03
105	GO:0019538: protein metabolic process	9.69E-03
106	GO:0007064: mitotic sister chromatid cohesion	9.69E-03
107	GO:0048829: root cap development	9.69E-03
108	GO:0045087: innate immune response	9.77E-03
109	GO:0016051: carbohydrate biosynthetic process	9.77E-03
110	GO:0010015: root morphogenesis	1.07E-02
111	GO:0000038: very long-chain fatty acid metabolic process	1.07E-02
112	GO:0052544: defense response by callose deposition in cell wall	1.07E-02
113	GO:0018119: peptidyl-cysteine S-nitrosylation	1.07E-02
114	GO:0007166: cell surface receptor signaling pathway	1.08E-02
115	GO:0006839: mitochondrial transport	1.12E-02
116	GO:0006631: fatty acid metabolic process	1.16E-02
117	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.18E-02
118	GO:0071365: cellular response to auxin stimulus	1.18E-02
119	GO:0051707: response to other organism	1.26E-02
120	GO:0009640: photomorphogenesis	1.26E-02
121	GO:0009409: response to cold	1.28E-02
122	GO:0005986: sucrose biosynthetic process	1.29E-02
123	GO:0018107: peptidyl-threonine phosphorylation	1.29E-02
124	GO:0055046: microgametogenesis	1.29E-02
125	GO:0034605: cellular response to heat	1.41E-02
126	GO:0010143: cutin biosynthetic process	1.41E-02
127	GO:0002237: response to molecule of bacterial origin	1.41E-02
128	GO:0009969: xyloglucan biosynthetic process	1.53E-02
129	GO:0009225: nucleotide-sugar metabolic process	1.53E-02
130	GO:0071732: cellular response to nitric oxide	1.53E-02
131	GO:0042538: hyperosmotic salinity response	1.59E-02
132	GO:0006351: transcription, DNA-templated	1.61E-02
133	GO:0006970: response to osmotic stress	1.74E-02
134	GO:0010224: response to UV-B	1.77E-02
135	GO:2000377: regulation of reactive oxygen species metabolic process	1.77E-02
136	GO:0009269: response to desiccation	2.03E-02
137	GO:0016998: cell wall macromolecule catabolic process	2.03E-02
138	GO:0030245: cellulose catabolic process	2.17E-02
139	GO:0006730: one-carbon metabolic process	2.17E-02
140	GO:0030433: ubiquitin-dependent ERAD pathway	2.17E-02
141	GO:0031348: negative regulation of defense response	2.17E-02
142	GO:0071369: cellular response to ethylene stimulus	2.31E-02
143	GO:0050832: defense response to fungus	2.34E-02
144	GO:0042545: cell wall modification	2.36E-02
145	GO:0009624: response to nematode	2.43E-02
146	GO:0010214: seed coat development	2.45E-02
147	GO:0048443: stamen development	2.45E-02
148	GO:0009306: protein secretion	2.45E-02
149	GO:0045892: negative regulation of transcription, DNA-templated	2.66E-02
150	GO:0000271: polysaccharide biosynthetic process	2.74E-02
151	GO:0006355: regulation of transcription, DNA-templated	2.84E-02
152	GO:0009749: response to glucose	3.20E-02
153	GO:0008654: phospholipid biosynthetic process	3.20E-02
154	GO:0009751: response to salicylic acid	3.33E-02
155	GO:0031047: gene silencing by RNA	3.52E-02
156	GO:1901657: glycosyl compound metabolic process	3.69E-02
157	GO:0071281: cellular response to iron ion	3.69E-02
158	GO:0009753: response to jasmonic acid	3.70E-02
159	GO:0019760: glucosinolate metabolic process	3.85E-02
160	GO:0009639: response to red or far red light	3.85E-02
161	GO:0007623: circadian rhythm	4.19E-02
162	GO:0010150: leaf senescence	4.19E-02
163	GO:0045490: pectin catabolic process	4.19E-02
164	GO:0010027: thylakoid membrane organization	4.37E-02
165	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.54E-02
166	GO:0009627: systemic acquired resistance	4.72E-02
167	GO:0015995: chlorophyll biosynthetic process	4.90E-02
168	GO:0010468: regulation of gene expression	4.99E-02
169	GO:0009617: response to bacterium	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
2	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
3	GO:0070566: adenylyltransferase activity	0.00E+00
4	GO:0005522: profilin binding	0.00E+00
5	GO:0033721: aldehyde dehydrogenase (NADP+) activity	0.00E+00
6	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
7	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
8	GO:0009922: fatty acid elongase activity	5.87E-09
9	GO:0016629: 12-oxophytodienoate reductase activity	5.06E-06
10	GO:0043565: sequence-specific DNA binding	1.03E-05
11	GO:0070330: aromatase activity	1.79E-05
12	GO:0046423: allene-oxide cyclase activity	1.79E-05
13	GO:0018685: alkane 1-monooxygenase activity	1.11E-04
14	GO:0004674: protein serine/threonine kinase activity	1.16E-04
15	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.19E-04
16	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.19E-04
17	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.19E-04
18	GO:0052894: norspermine:oxygen oxidoreductase activity	3.34E-04
19	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	3.34E-04
20	GO:0090422: thiamine pyrophosphate transporter activity	3.34E-04
21	GO:0004013: adenosylhomocysteinase activity	3.34E-04
22	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	3.34E-04
23	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	3.34E-04
24	GO:0090440: abscisic acid transporter activity	3.34E-04
25	GO:0004348: glucosylceramidase activity	3.34E-04
26	GO:0016301: kinase activity	4.59E-04
27	GO:0004713: protein tyrosine kinase activity	7.22E-04
28	GO:0008460: dTDP-glucose 4,6-dehydratase activity	7.29E-04
29	GO:0003839: gamma-glutamylcyclotransferase activity	7.29E-04
30	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	7.29E-04
31	GO:0010280: UDP-L-rhamnose synthase activity	7.29E-04
32	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	7.29E-04
33	GO:0050377: UDP-glucose 4,6-dehydratase activity	7.29E-04
34	GO:0004103: choline kinase activity	7.29E-04
35	GO:0008883: glutamyl-tRNA reductase activity	7.29E-04
36	GO:0017040: ceramidase activity	7.29E-04
37	GO:0030246: carbohydrate binding	9.33E-04
38	GO:0046592: polyamine oxidase activity	1.18E-03
39	GO:0047274: galactinol-sucrose galactosyltransferase activity	1.18E-03
40	GO:0004383: guanylate cyclase activity	1.18E-03
41	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	1.18E-03
42	GO:0008131: primary amine oxidase activity	1.21E-03
43	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.67E-03
44	GO:0004351: glutamate decarboxylase activity	1.70E-03
45	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.70E-03
46	GO:0001653: peptide receptor activity	1.70E-03
47	GO:0035250: UDP-galactosyltransferase activity	1.70E-03
48	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.70E-03
49	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.21E-03
50	GO:0043015: gamma-tubulin binding	2.28E-03
51	GO:0050378: UDP-glucuronate 4-epimerase activity	2.28E-03
52	GO:0004659: prenyltransferase activity	2.28E-03
53	GO:0008514: organic anion transmembrane transporter activity	2.62E-03
54	GO:0019139: cytokinin dehydrogenase activity	2.91E-03
55	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.91E-03
56	GO:0004356: glutamate-ammonia ligase activity	2.91E-03
57	GO:0031625: ubiquitin protein ligase binding	3.29E-03
58	GO:0010181: FMN binding	3.55E-03
59	GO:0035673: oligopeptide transmembrane transporter activity	3.60E-03
60	GO:0004029: aldehyde dehydrogenase (NAD) activity	3.60E-03
61	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	3.60E-03
62	GO:0005516: calmodulin binding	3.98E-03
63	GO:0004143: diacylglycerol kinase activity	5.11E-03
64	GO:0004427: inorganic diphosphatase activity	5.11E-03
65	GO:0016621: cinnamoyl-CoA reductase activity	5.11E-03
66	GO:0019899: enzyme binding	5.11E-03
67	GO:0008143: poly(A) binding	5.11E-03
68	GO:0005524: ATP binding	5.64E-03
69	GO:0003951: NAD+ kinase activity	6.81E-03
70	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	7.73E-03
71	GO:0003700: transcription factor activity, sequence-specific DNA binding	8.22E-03
72	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	8.68E-03
73	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	8.91E-03
74	GO:0004864: protein phosphatase inhibitor activity	9.69E-03
75	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.02E-02
76	GO:0015198: oligopeptide transporter activity	1.18E-02
77	GO:0005262: calcium channel activity	1.29E-02
78	GO:0005388: calcium-transporting ATPase activity	1.29E-02
79	GO:0000175: 3'-5'-exoribonuclease activity	1.29E-02
80	GO:0005315: inorganic phosphate transmembrane transporter activity	1.29E-02
81	GO:0043621: protein self-association	1.37E-02
82	GO:0008083: growth factor activity	1.41E-02
83	GO:0004672: protein kinase activity	1.50E-02
84	GO:0004857: enzyme inhibitor activity	1.77E-02
85	GO:0045330: aspartyl esterase activity	1.89E-02
86	GO:0004540: ribonuclease activity	2.03E-02
87	GO:0044212: transcription regulatory region DNA binding	2.14E-02
88	GO:0030599: pectinesterase activity	2.29E-02
89	GO:0052689: carboxylic ester hydrolase activity	2.36E-02
90	GO:0003779: actin binding	2.36E-02
91	GO:0016746: transferase activity, transferring acyl groups	2.51E-02
92	GO:0016758: transferase activity, transferring hexosyl groups	2.97E-02
93	GO:0050662: coenzyme binding	3.05E-02
94	GO:0004518: nuclease activity	3.52E-02
95	GO:0051015: actin filament binding	3.69E-02
96	GO:0009055: electron carrier activity	3.70E-02
97	GO:0016791: phosphatase activity	3.85E-02
98	GO:0015297: antiporter activity	4.01E-02
99	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.02E-02
100	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.02E-02
101	GO:0102483: scopolin beta-glucosidase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0032039: integrator complex	0.00E+00
2	GO:0005886: plasma membrane	8.21E-05
3	GO:0046658: anchored component of plasma membrane	1.07E-04
4	GO:0005768: endosome	1.46E-04
5	GO:0005911: cell-cell junction	3.34E-04
6	GO:0016442: RISC complex	3.34E-04
7	GO:0009923: fatty acid elongase complex	3.34E-04
8	GO:0016021: integral component of membrane	3.84E-04
9	GO:0010494: cytoplasmic stress granule	5.24E-04
10	GO:0005802: trans-Golgi network	1.36E-03
11	GO:0000178: exosome (RNase complex)	2.91E-03
12	GO:0031225: anchored component of membrane	4.27E-03
13	GO:0030173: integral component of Golgi membrane	4.33E-03
14	GO:0032580: Golgi cisterna membrane	4.94E-03
15	GO:0005794: Golgi apparatus	5.55E-03
16	GO:0000932: P-body	5.89E-03
17	GO:0005743: mitochondrial inner membrane	8.14E-03
18	GO:0016604: nuclear body	8.68E-03
19	GO:0009536: plastid	1.06E-02
20	GO:0048471: perinuclear region of cytoplasm	1.07E-02
21	GO:0009505: plant-type cell wall	1.11E-02
22	GO:0009506: plasmodesma	1.78E-02
23	GO:0010008: endosome membrane	2.09E-02
24	GO:0016020: membrane	2.30E-02
25	GO:0009706: chloroplast inner membrane	2.43E-02
26	GO:0030136: clathrin-coated vesicle	2.60E-02
27	GO:0005770: late endosome	2.89E-02
28	GO:0005778: peroxisomal membrane	4.02E-02
29	GO:0005618: cell wall	4.18E-02