GO Enrichment Analysis of Co-expressed Genes with
AT5G52030
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0098586: cellular response to virus | 0.00E+00 |
| 3 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 4 | GO:0019439: aromatic compound catabolic process | 0.00E+00 |
| 5 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 6 | GO:0051246: regulation of protein metabolic process | 0.00E+00 |
| 7 | GO:1901965: endoplasmic reticulum to chloroplast transport | 0.00E+00 |
| 8 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 9 | GO:0019685: photosynthesis, dark reaction | 0.00E+00 |
| 10 | GO:0080005: photosystem stoichiometry adjustment | 2.56E-06 |
| 11 | GO:0009657: plastid organization | 6.18E-06 |
| 12 | GO:0071482: cellular response to light stimulus | 6.18E-06 |
| 13 | GO:2001141: regulation of RNA biosynthetic process | 2.11E-05 |
| 14 | GO:0006655: phosphatidylglycerol biosynthetic process | 9.03E-05 |
| 15 | GO:0006605: protein targeting | 2.09E-04 |
| 16 | GO:0048564: photosystem I assembly | 2.09E-04 |
| 17 | GO:0010362: negative regulation of anion channel activity by blue light | 2.34E-04 |
| 18 | GO:0019285: glycine betaine biosynthetic process from choline | 2.34E-04 |
| 19 | GO:0019646: aerobic electron transport chain | 2.34E-04 |
| 20 | GO:0033388: putrescine biosynthetic process from arginine | 2.34E-04 |
| 21 | GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.34E-04 |
| 22 | GO:0031426: polycistronic mRNA processing | 2.34E-04 |
| 23 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.34E-04 |
| 24 | GO:1990052: ER to chloroplast lipid transport | 2.34E-04 |
| 25 | GO:0071806: protein transmembrane transport | 2.34E-04 |
| 26 | GO:1904964: positive regulation of phytol biosynthetic process | 2.34E-04 |
| 27 | GO:0071461: cellular response to redox state | 2.34E-04 |
| 28 | GO:0006436: tryptophanyl-tRNA aminoacylation | 2.34E-04 |
| 29 | GO:1900426: positive regulation of defense response to bacterium | 3.73E-04 |
| 30 | GO:0010027: thylakoid membrane organization | 3.96E-04 |
| 31 | GO:0006352: DNA-templated transcription, initiation | 5.04E-04 |
| 32 | GO:0046741: transport of virus in host, tissue to tissue | 5.20E-04 |
| 33 | GO:0006695: cholesterol biosynthetic process | 5.20E-04 |
| 34 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.20E-04 |
| 35 | GO:0034755: iron ion transmembrane transport | 5.20E-04 |
| 36 | GO:0006435: threonyl-tRNA aminoacylation | 5.20E-04 |
| 37 | GO:0048314: embryo sac morphogenesis | 5.20E-04 |
| 38 | GO:0030187: melatonin biosynthetic process | 5.20E-04 |
| 39 | GO:0000256: allantoin catabolic process | 5.20E-04 |
| 40 | GO:0009446: putrescine biosynthetic process | 5.20E-04 |
| 41 | GO:0080185: effector dependent induction by symbiont of host immune response | 5.20E-04 |
| 42 | GO:0018298: protein-chromophore linkage | 5.57E-04 |
| 43 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.76E-04 |
| 44 | GO:0009767: photosynthetic electron transport chain | 6.54E-04 |
| 45 | GO:0009405: pathogenesis | 8.44E-04 |
| 46 | GO:0006013: mannose metabolic process | 8.44E-04 |
| 47 | GO:0002230: positive regulation of defense response to virus by host | 8.44E-04 |
| 48 | GO:1901672: positive regulation of systemic acquired resistance | 8.44E-04 |
| 49 | GO:0006954: inflammatory response | 8.44E-04 |
| 50 | GO:0010136: ureide catabolic process | 8.44E-04 |
| 51 | GO:0051604: protein maturation | 8.44E-04 |
| 52 | GO:0006696: ergosterol biosynthetic process | 8.44E-04 |
| 53 | GO:0090307: mitotic spindle assembly | 1.20E-03 |
| 54 | GO:0006809: nitric oxide biosynthetic process | 1.20E-03 |
| 55 | GO:0006145: purine nucleobase catabolic process | 1.20E-03 |
| 56 | GO:0051016: barbed-end actin filament capping | 1.20E-03 |
| 57 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.20E-03 |
| 58 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 1.20E-03 |
| 59 | GO:0046739: transport of virus in multicellular host | 1.20E-03 |
| 60 | GO:0050482: arachidonic acid secretion | 1.20E-03 |
| 61 | GO:0043572: plastid fission | 1.20E-03 |
| 62 | GO:0010239: chloroplast mRNA processing | 1.20E-03 |
| 63 | GO:0031122: cytoplasmic microtubule organization | 1.61E-03 |
| 64 | GO:0006021: inositol biosynthetic process | 1.61E-03 |
| 65 | GO:0009902: chloroplast relocation | 1.61E-03 |
| 66 | GO:0042274: ribosomal small subunit biogenesis | 1.61E-03 |
| 67 | GO:0031935: regulation of chromatin silencing | 1.61E-03 |
| 68 | GO:0009765: photosynthesis, light harvesting | 1.61E-03 |
| 69 | GO:0009658: chloroplast organization | 1.63E-03 |
| 70 | GO:0016117: carotenoid biosynthetic process | 1.70E-03 |
| 71 | GO:0034052: positive regulation of plant-type hypersensitive response | 2.05E-03 |
| 72 | GO:0016120: carotene biosynthetic process | 2.05E-03 |
| 73 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.05E-03 |
| 74 | GO:0031365: N-terminal protein amino acid modification | 2.05E-03 |
| 75 | GO:0006282: regulation of DNA repair | 2.05E-03 |
| 76 | GO:0016123: xanthophyll biosynthetic process | 2.05E-03 |
| 77 | GO:0009791: post-embryonic development | 2.27E-03 |
| 78 | GO:0008654: phospholipid biosynthetic process | 2.27E-03 |
| 79 | GO:0046855: inositol phosphate dephosphorylation | 2.52E-03 |
| 80 | GO:0010190: cytochrome b6f complex assembly | 2.52E-03 |
| 81 | GO:0042549: photosystem II stabilization | 2.52E-03 |
| 82 | GO:0015979: photosynthesis | 2.77E-03 |
| 83 | GO:0042372: phylloquinone biosynthetic process | 3.03E-03 |
| 84 | GO:0010189: vitamin E biosynthetic process | 3.03E-03 |
| 85 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 3.58E-03 |
| 86 | GO:0048528: post-embryonic root development | 3.58E-03 |
| 87 | GO:0009772: photosynthetic electron transport in photosystem II | 3.58E-03 |
| 88 | GO:1900056: negative regulation of leaf senescence | 3.58E-03 |
| 89 | GO:0009816: defense response to bacterium, incompatible interaction | 3.71E-03 |
| 90 | GO:0030091: protein repair | 4.15E-03 |
| 91 | GO:0006644: phospholipid metabolic process | 4.15E-03 |
| 92 | GO:0009793: embryo development ending in seed dormancy | 4.49E-03 |
| 93 | GO:0007568: aging | 5.28E-03 |
| 94 | GO:0045337: farnesyl diphosphate biosynthetic process | 5.37E-03 |
| 95 | GO:0048507: meristem development | 5.37E-03 |
| 96 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 5.37E-03 |
| 97 | GO:0033384: geranyl diphosphate biosynthetic process | 5.37E-03 |
| 98 | GO:0055114: oxidation-reduction process | 5.48E-03 |
| 99 | GO:0009853: photorespiration | 5.79E-03 |
| 100 | GO:0010380: regulation of chlorophyll biosynthetic process | 6.03E-03 |
| 101 | GO:0009638: phototropism | 6.03E-03 |
| 102 | GO:0045036: protein targeting to chloroplast | 6.71E-03 |
| 103 | GO:0006415: translational termination | 7.43E-03 |
| 104 | GO:0006879: cellular iron ion homeostasis | 7.43E-03 |
| 105 | GO:0006790: sulfur compound metabolic process | 8.17E-03 |
| 106 | GO:0006807: nitrogen compound metabolic process | 8.93E-03 |
| 107 | GO:0010020: chloroplast fission | 9.72E-03 |
| 108 | GO:0010207: photosystem II assembly | 9.72E-03 |
| 109 | GO:0019853: L-ascorbic acid biosynthetic process | 1.05E-02 |
| 110 | GO:0090351: seedling development | 1.05E-02 |
| 111 | GO:0046854: phosphatidylinositol phosphorylation | 1.05E-02 |
| 112 | GO:0006418: tRNA aminoacylation for protein translation | 1.31E-02 |
| 113 | GO:0007017: microtubule-based process | 1.31E-02 |
| 114 | GO:0006825: copper ion transport | 1.31E-02 |
| 115 | GO:0051302: regulation of cell division | 1.31E-02 |
| 116 | GO:0051321: meiotic cell cycle | 1.40E-02 |
| 117 | GO:0006457: protein folding | 1.45E-02 |
| 118 | GO:0006396: RNA processing | 1.48E-02 |
| 119 | GO:0016226: iron-sulfur cluster assembly | 1.50E-02 |
| 120 | GO:0040007: growth | 1.59E-02 |
| 121 | GO:0032259: methylation | 1.67E-02 |
| 122 | GO:0006284: base-excision repair | 1.69E-02 |
| 123 | GO:0006281: DNA repair | 1.76E-02 |
| 124 | GO:0010118: stomatal movement | 1.89E-02 |
| 125 | GO:0006508: proteolysis | 2.24E-02 |
| 126 | GO:0010193: response to ozone | 2.31E-02 |
| 127 | GO:0000302: response to reactive oxygen species | 2.31E-02 |
| 128 | GO:0006413: translational initiation | 2.32E-02 |
| 129 | GO:0031047: gene silencing by RNA | 2.42E-02 |
| 130 | GO:0016032: viral process | 2.42E-02 |
| 131 | GO:0007264: small GTPase mediated signal transduction | 2.42E-02 |
| 132 | GO:0007623: circadian rhythm | 2.49E-02 |
| 133 | GO:0006464: cellular protein modification process | 2.65E-02 |
| 134 | GO:0051607: defense response to virus | 2.89E-02 |
| 135 | GO:0010468: regulation of gene expression | 2.97E-02 |
| 136 | GO:0042128: nitrate assimilation | 3.25E-02 |
| 137 | GO:0015995: chlorophyll biosynthetic process | 3.38E-02 |
| 138 | GO:0048481: plant ovule development | 3.63E-02 |
| 139 | GO:0000160: phosphorelay signal transduction system | 3.76E-02 |
| 140 | GO:0009813: flavonoid biosynthetic process | 3.76E-02 |
| 141 | GO:0009910: negative regulation of flower development | 4.03E-02 |
| 142 | GO:0000724: double-strand break repair via homologous recombination | 4.16E-02 |
| 143 | GO:0009637: response to blue light | 4.30E-02 |
| 144 | GO:0080167: response to karrikin | 4.76E-02 |
| 145 | GO:0055085: transmembrane transport | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 2 | GO:0016708: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor | 0.00E+00 |
| 3 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 4 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 5 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 6 | GO:0019133: choline monooxygenase activity | 0.00E+00 |
| 7 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 8 | GO:0050126: N-carbamoylputrescine amidase activity | 0.00E+00 |
| 9 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 10 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 11 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 12 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 13 | GO:0016491: oxidoreductase activity | 1.71E-05 |
| 14 | GO:0016987: sigma factor activity | 3.85E-05 |
| 15 | GO:0001053: plastid sigma factor activity | 3.85E-05 |
| 16 | GO:0004605: phosphatidate cytidylyltransferase activity | 9.03E-05 |
| 17 | GO:0008080: N-acetyltransferase activity | 1.80E-04 |
| 18 | GO:0004008: copper-exporting ATPase activity | 2.34E-04 |
| 19 | GO:0051996: squalene synthase activity | 2.34E-04 |
| 20 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.34E-04 |
| 21 | GO:0004830: tryptophan-tRNA ligase activity | 2.34E-04 |
| 22 | GO:0030941: chloroplast targeting sequence binding | 2.34E-04 |
| 23 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.34E-04 |
| 24 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 2.34E-04 |
| 25 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.20E-04 |
| 26 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.20E-04 |
| 27 | GO:0004829: threonine-tRNA ligase activity | 5.20E-04 |
| 28 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 5.20E-04 |
| 29 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.20E-04 |
| 30 | GO:0032947: protein complex scaffold | 8.44E-04 |
| 31 | GO:0004148: dihydrolipoyl dehydrogenase activity | 8.44E-04 |
| 32 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 8.44E-04 |
| 33 | GO:0004751: ribose-5-phosphate isomerase activity | 8.44E-04 |
| 34 | GO:0004180: carboxypeptidase activity | 8.44E-04 |
| 35 | GO:0048027: mRNA 5'-UTR binding | 1.20E-03 |
| 36 | GO:0016851: magnesium chelatase activity | 1.20E-03 |
| 37 | GO:0016149: translation release factor activity, codon specific | 1.20E-03 |
| 38 | GO:0009882: blue light photoreceptor activity | 1.20E-03 |
| 39 | GO:0022891: substrate-specific transmembrane transporter activity | 1.44E-03 |
| 40 | GO:0043015: gamma-tubulin binding | 1.61E-03 |
| 41 | GO:0043495: protein anchor | 1.61E-03 |
| 42 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.61E-03 |
| 43 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.61E-03 |
| 44 | GO:0005319: lipid transporter activity | 1.61E-03 |
| 45 | GO:0051861: glycolipid binding | 1.61E-03 |
| 46 | GO:0008453: alanine-glyoxylate transaminase activity | 1.61E-03 |
| 47 | GO:0051011: microtubule minus-end binding | 2.05E-03 |
| 48 | GO:0004623: phospholipase A2 activity | 2.05E-03 |
| 49 | GO:0010181: FMN binding | 2.12E-03 |
| 50 | GO:0008233: peptidase activity | 2.21E-03 |
| 51 | GO:0015631: tubulin binding | 3.03E-03 |
| 52 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.03E-03 |
| 53 | GO:0004559: alpha-mannosidase activity | 3.03E-03 |
| 54 | GO:0019899: enzyme binding | 3.58E-03 |
| 55 | GO:0008235: metalloexopeptidase activity | 3.58E-03 |
| 56 | GO:0016168: chlorophyll binding | 3.71E-03 |
| 57 | GO:0008236: serine-type peptidase activity | 4.35E-03 |
| 58 | GO:0005375: copper ion transmembrane transporter activity | 4.74E-03 |
| 59 | GO:0004337: geranyltranstransferase activity | 5.37E-03 |
| 60 | GO:0071949: FAD binding | 5.37E-03 |
| 61 | GO:0003747: translation release factor activity | 5.37E-03 |
| 62 | GO:0005381: iron ion transmembrane transporter activity | 6.03E-03 |
| 63 | GO:0045309: protein phosphorylated amino acid binding | 6.03E-03 |
| 64 | GO:0019904: protein domain specific binding | 7.43E-03 |
| 65 | GO:0004177: aminopeptidase activity | 7.43E-03 |
| 66 | GO:0004161: dimethylallyltranstransferase activity | 7.43E-03 |
| 67 | GO:0008168: methyltransferase activity | 7.77E-03 |
| 68 | GO:0051537: 2 iron, 2 sulfur cluster binding | 8.08E-03 |
| 69 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 8.93E-03 |
| 70 | GO:0000155: phosphorelay sensor kinase activity | 8.93E-03 |
| 71 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.01E-02 |
| 72 | GO:0031625: ubiquitin protein ligase binding | 1.12E-02 |
| 73 | GO:0005528: FK506 binding | 1.22E-02 |
| 74 | GO:0051536: iron-sulfur cluster binding | 1.22E-02 |
| 75 | GO:0003954: NADH dehydrogenase activity | 1.22E-02 |
| 76 | GO:0004176: ATP-dependent peptidase activity | 1.40E-02 |
| 77 | GO:0003727: single-stranded RNA binding | 1.69E-02 |
| 78 | GO:0003924: GTPase activity | 1.76E-02 |
| 79 | GO:0004812: aminoacyl-tRNA ligase activity | 1.79E-02 |
| 80 | GO:0004402: histone acetyltransferase activity | 1.89E-02 |
| 81 | GO:0009055: electron carrier activity | 1.92E-02 |
| 82 | GO:0004527: exonuclease activity | 1.99E-02 |
| 83 | GO:0005525: GTP binding | 2.07E-02 |
| 84 | GO:0019901: protein kinase binding | 2.20E-02 |
| 85 | GO:0048038: quinone binding | 2.31E-02 |
| 86 | GO:0004518: nuclease activity | 2.42E-02 |
| 87 | GO:0005506: iron ion binding | 2.75E-02 |
| 88 | GO:0005200: structural constituent of cytoskeleton | 2.77E-02 |
| 89 | GO:0003743: translation initiation factor activity | 2.91E-02 |
| 90 | GO:0042802: identical protein binding | 3.16E-02 |
| 91 | GO:0050897: cobalt ion binding | 4.03E-02 |
| 92 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 4.30E-02 |
| 93 | GO:0004364: glutathione transferase activity | 5.00E-02 |
| 94 | GO:0061630: ubiquitin protein ligase activity | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.31E-32 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.37E-09 |
| 3 | GO:0031969: chloroplast membrane | 4.11E-08 |
| 4 | GO:0009941: chloroplast envelope | 6.91E-06 |
| 5 | GO:0009570: chloroplast stroma | 8.82E-06 |
| 6 | GO:0009534: chloroplast thylakoid | 2.18E-04 |
| 7 | GO:0009523: photosystem II | 2.20E-04 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 5.19E-04 |
| 9 | GO:0031304: intrinsic component of mitochondrial inner membrane | 5.20E-04 |
| 10 | GO:0008274: gamma-tubulin ring complex | 5.20E-04 |
| 11 | GO:0008290: F-actin capping protein complex | 5.20E-04 |
| 12 | GO:0009707: chloroplast outer membrane | 5.57E-04 |
| 13 | GO:0010007: magnesium chelatase complex | 8.44E-04 |
| 14 | GO:0009528: plastid inner membrane | 8.44E-04 |
| 15 | GO:0031977: thylakoid lumen | 9.31E-04 |
| 16 | GO:0000923: equatorial microtubule organizing center | 1.20E-03 |
| 17 | GO:0009526: plastid envelope | 1.61E-03 |
| 18 | GO:0030286: dynein complex | 1.61E-03 |
| 19 | GO:0055035: plastid thylakoid membrane | 2.05E-03 |
| 20 | GO:0031359: integral component of chloroplast outer membrane | 3.58E-03 |
| 21 | GO:0009536: plastid | 3.79E-03 |
| 22 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 4.74E-03 |
| 23 | GO:0042644: chloroplast nucleoid | 5.37E-03 |
| 24 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.37E-03 |
| 25 | GO:0000922: spindle pole | 5.37E-03 |
| 26 | GO:0009508: plastid chromosome | 8.93E-03 |
| 27 | GO:0031966: mitochondrial membrane | 9.38E-03 |
| 28 | GO:0005875: microtubule associated complex | 1.14E-02 |
| 29 | GO:0005747: mitochondrial respiratory chain complex I | 1.23E-02 |
| 30 | GO:0042651: thylakoid membrane | 1.31E-02 |
| 31 | GO:0045271: respiratory chain complex I | 1.31E-02 |
| 32 | GO:0009654: photosystem II oxygen evolving complex | 1.31E-02 |
| 33 | GO:0010287: plastoglobule | 1.71E-02 |
| 34 | GO:0019898: extrinsic component of membrane | 2.20E-02 |
| 35 | GO:0009295: nucleoid | 2.77E-02 |
| 36 | GO:0005778: peroxisomal membrane | 2.77E-02 |