Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G51020

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010477: response to sulfur dioxide0.00E+00
2GO:0015882: L-ascorbic acid transport0.00E+00
3GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
4GO:0009661: chromoplast organization0.00E+00
5GO:0005997: xylulose metabolic process0.00E+00
6GO:0051246: regulation of protein metabolic process0.00E+00
7GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
8GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
9GO:1901918: negative regulation of exoribonuclease activity0.00E+00
10GO:0042821: pyridoxal biosynthetic process0.00E+00
11GO:0042820: vitamin B6 catabolic process0.00E+00
12GO:1901965: endoplasmic reticulum to chloroplast transport0.00E+00
13GO:0009658: chloroplast organization9.45E-07
14GO:0055114: oxidation-reduction process1.11E-06
15GO:0000256: allantoin catabolic process3.89E-06
16GO:0080005: photosystem stoichiometry adjustment3.89E-06
17GO:0018298: protein-chromophore linkage5.22E-06
18GO:0048564: photosystem I assembly7.38E-06
19GO:0010136: ureide catabolic process1.39E-05
20GO:0009644: response to high light intensity2.18E-05
21GO:0006145: purine nucleobase catabolic process3.12E-05
22GO:0015979: photosynthesis3.25E-05
23GO:0009767: photosynthetic electron transport chain5.13E-05
24GO:0010021: amylopectin biosynthetic process5.61E-05
25GO:0015994: chlorophyll metabolic process5.61E-05
26GO:0010207: photosystem II assembly6.23E-05
27GO:0015995: chlorophyll biosynthetic process7.28E-05
28GO:0016120: carotene biosynthetic process8.85E-05
29GO:0009643: photosynthetic acclimation1.29E-04
30GO:0010190: cytochrome b6f complex assembly1.29E-04
31GO:0009853: photorespiration1.36E-04
32GO:1990052: ER to chloroplast lipid transport2.92E-04
33GO:0033388: putrescine biosynthetic process from arginine2.92E-04
34GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.92E-04
35GO:0071806: protein transmembrane transport2.92E-04
36GO:1904964: positive regulation of phytol biosynthetic process2.92E-04
37GO:0071277: cellular response to calcium ion2.92E-04
38GO:0042371: vitamin K biosynthetic process2.92E-04
39GO:0071461: cellular response to redox state2.92E-04
40GO:0006436: tryptophanyl-tRNA aminoacylation2.92E-04
41GO:0010028: xanthophyll cycle2.92E-04
42GO:0010362: negative regulation of anion channel activity by blue light2.92E-04
43GO:0009443: pyridoxal 5'-phosphate salvage2.92E-04
44GO:0031426: polycistronic mRNA processing2.92E-04
45GO:1904966: positive regulation of vitamin E biosynthetic process2.92E-04
46GO:0009657: plastid organization3.57E-04
47GO:0042548: regulation of photosynthesis, light reaction6.40E-04
48GO:0034755: iron ion transmembrane transport6.40E-04
49GO:0006435: threonyl-tRNA aminoacylation6.40E-04
50GO:0009446: putrescine biosynthetic process6.40E-04
51GO:1904143: positive regulation of carotenoid biosynthetic process6.40E-04
52GO:0080183: response to photooxidative stress6.40E-04
53GO:0016122: xanthophyll metabolic process6.40E-04
54GO:0042853: L-alanine catabolic process6.40E-04
55GO:0009915: phloem sucrose loading6.40E-04
56GO:0048314: embryo sac morphogenesis6.40E-04
57GO:1902326: positive regulation of chlorophyll biosynthetic process6.40E-04
58GO:0030187: melatonin biosynthetic process6.40E-04
59GO:0006790: sulfur compound metabolic process7.84E-04
60GO:0006013: mannose metabolic process1.04E-03
61GO:0006696: ergosterol biosynthetic process1.04E-03
62GO:0005977: glycogen metabolic process1.04E-03
63GO:0090391: granum assembly1.04E-03
64GO:0009405: pathogenesis1.04E-03
65GO:0006168: adenine salvage1.48E-03
66GO:0050482: arachidonic acid secretion1.48E-03
67GO:2001141: regulation of RNA biosynthetic process1.48E-03
68GO:0006166: purine ribonucleoside salvage1.48E-03
69GO:0071484: cellular response to light intensity1.48E-03
70GO:0046653: tetrahydrofolate metabolic process1.48E-03
71GO:0010239: chloroplast mRNA processing1.48E-03
72GO:0006809: nitric oxide biosynthetic process1.48E-03
73GO:0051016: barbed-end actin filament capping1.48E-03
74GO:0046739: transport of virus in multicellular host1.48E-03
75GO:0009768: photosynthesis, light harvesting in photosystem I1.51E-03
76GO:0009902: chloroplast relocation1.99E-03
77GO:0009765: photosynthesis, light harvesting1.99E-03
78GO:0006021: inositol biosynthetic process1.99E-03
79GO:0016117: carotenoid biosynthetic process2.32E-03
80GO:0010117: photoprotection2.54E-03
81GO:0045038: protein import into chloroplast thylakoid membrane2.54E-03
82GO:0016123: xanthophyll biosynthetic process2.54E-03
83GO:0044209: AMP salvage2.54E-03
84GO:0019252: starch biosynthetic process3.12E-03
85GO:0009791: post-embryonic development3.12E-03
86GO:0046855: inositol phosphate dephosphorylation3.14E-03
87GO:0050665: hydrogen peroxide biosynthetic process3.14E-03
88GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione3.14E-03
89GO:0042549: photosystem II stabilization3.14E-03
90GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.14E-03
91GO:0006086: acetyl-CoA biosynthetic process from pyruvate3.14E-03
92GO:0010189: vitamin E biosynthetic process3.77E-03
93GO:0009854: oxidative photosynthetic carbon pathway3.77E-03
94GO:0009648: photoperiodism3.77E-03
95GO:0071470: cellular response to osmotic stress3.77E-03
96GO:0009735: response to cytokinin3.79E-03
97GO:0030163: protein catabolic process3.80E-03
98GO:0046686: response to cadmium ion3.85E-03
99GO:0009396: folic acid-containing compound biosynthetic process4.45E-03
100GO:0010038: response to metal ion4.45E-03
101GO:0048528: post-embryonic root development4.45E-03
102GO:1900056: negative regulation of leaf senescence4.45E-03
103GO:0009645: response to low light intensity stimulus4.45E-03
104GO:0006605: protein targeting5.17E-03
105GO:0009704: de-etiolation5.17E-03
106GO:0050821: protein stabilization5.17E-03
107GO:0000105: histidine biosynthetic process5.17E-03
108GO:0006644: phospholipid metabolic process5.17E-03
109GO:0009642: response to light intensity5.17E-03
110GO:0042128: nitrate assimilation5.38E-03
111GO:0032544: plastid translation5.92E-03
112GO:0044030: regulation of DNA methylation5.92E-03
113GO:0071482: cellular response to light stimulus5.92E-03
114GO:0006413: translational initiation6.44E-03
115GO:0006783: heme biosynthetic process6.71E-03
116GO:0048507: meristem development6.71E-03
117GO:0006754: ATP biosynthetic process6.71E-03
118GO:0000373: Group II intron splicing6.71E-03
119GO:0098656: anion transmembrane transport6.71E-03
120GO:0009821: alkaloid biosynthetic process6.71E-03
121GO:0010206: photosystem II repair6.71E-03
122GO:0090333: regulation of stomatal closure6.71E-03
123GO:0007623: circadian rhythm7.04E-03
124GO:0007568: aging7.28E-03
125GO:0009638: phototropism7.54E-03
126GO:0006779: porphyrin-containing compound biosynthetic process7.54E-03
127GO:0035999: tetrahydrofolate interconversion7.54E-03
128GO:0009098: leucine biosynthetic process7.54E-03
129GO:0010380: regulation of chlorophyll biosynthetic process7.54E-03
130GO:0009637: response to blue light7.98E-03
131GO:0034599: cellular response to oxidative stress8.35E-03
132GO:0006995: cellular response to nitrogen starvation8.40E-03
133GO:0045036: protein targeting to chloroplast8.40E-03
134GO:0006259: DNA metabolic process8.40E-03
135GO:0009970: cellular response to sulfate starvation8.40E-03
136GO:0006782: protoporphyrinogen IX biosynthetic process8.40E-03
137GO:0006879: cellular iron ion homeostasis9.30E-03
138GO:0006352: DNA-templated transcription, initiation9.30E-03
139GO:0016485: protein processing9.30E-03
140GO:0006265: DNA topological change9.30E-03
141GO:0009773: photosynthetic electron transport in photosystem I9.30E-03
142GO:0010114: response to red light1.03E-02
143GO:0006807: nitrogen compound metabolic process1.12E-02
144GO:0005986: sucrose biosynthetic process1.12E-02
145GO:0009266: response to temperature stimulus1.22E-02
146GO:0031347: regulation of defense response1.25E-02
147GO:0090351: seedling development1.32E-02
148GO:0046854: phosphatidylinositol phosphorylation1.32E-02
149GO:0019853: L-ascorbic acid biosynthetic process1.32E-02
150GO:0006364: rRNA processing1.39E-02
151GO:0006071: glycerol metabolic process1.43E-02
152GO:0009863: salicylic acid mediated signaling pathway1.54E-02
153GO:0009416: response to light stimulus1.59E-02
154GO:0080167: response to karrikin1.61E-02
155GO:0007017: microtubule-based process1.65E-02
156GO:0008299: isoprenoid biosynthetic process1.65E-02
157GO:0006418: tRNA aminoacylation for protein translation1.65E-02
158GO:0051321: meiotic cell cycle1.76E-02
159GO:0006366: transcription from RNA polymerase II promoter1.76E-02
160GO:0006730: one-carbon metabolic process1.88E-02
161GO:0016226: iron-sulfur cluster assembly1.88E-02
162GO:0045454: cell redox homeostasis2.03E-02
163GO:0009306: protein secretion2.12E-02
164GO:0006457: protein folding2.34E-02
165GO:0042335: cuticle development2.37E-02
166GO:0010118: stomatal movement2.37E-02
167GO:0006606: protein import into nucleus2.37E-02
168GO:0006662: glycerol ether metabolic process2.50E-02
169GO:0009409: response to cold2.53E-02
170GO:0009058: biosynthetic process2.63E-02
171GO:0007059: chromosome segregation2.64E-02
172GO:0010193: response to ozone2.91E-02
173GO:0007264: small GTPase mediated signal transduction3.05E-02
174GO:0016032: viral process3.05E-02
175GO:0019761: glucosinolate biosynthetic process3.05E-02
176GO:0010286: heat acclimation3.48E-02
177GO:0010027: thylakoid membrane organization3.78E-02
178GO:0009816: defense response to bacterium, incompatible interaction3.93E-02
179GO:0006508: proteolysis4.07E-02
180GO:0010468: regulation of gene expression4.09E-02
181GO:0006979: response to oxidative stress4.54E-02
182GO:0008219: cell death4.57E-02
183GO:0048481: plant ovule development4.57E-02
184GO:0000160: phosphorelay signal transduction system4.73E-02
185GO:0006811: ion transport4.89E-02
186GO:0010218: response to far red light4.89E-02
RankGO TermAdjusted P value
1GO:0015229: L-ascorbic acid transporter activity0.00E+00
2GO:0045435: lycopene epsilon cyclase activity0.00E+00
3GO:0004760: serine-pyruvate transaminase activity0.00E+00
4GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
5GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
6GO:0046905: phytoene synthase activity0.00E+00
7GO:0008482: sulfite oxidase activity0.00E+00
8GO:0050126: N-carbamoylputrescine amidase activity0.00E+00
9GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
10GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
11GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
12GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
13GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
14GO:0050281: serine-glyoxylate transaminase activity0.00E+00
15GO:0004059: aralkylamine N-acetyltransferase activity0.00E+00
16GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
17GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
18GO:0009976: tocopherol cyclase activity0.00E+00
19GO:0070402: NADPH binding1.39E-05
20GO:0008080: N-acetyltransferase activity1.65E-05
21GO:0008453: alanine-glyoxylate transaminase activity5.61E-05
22GO:0016168: chlorophyll binding5.94E-05
23GO:0016491: oxidoreductase activity2.49E-04
24GO:0051996: squalene synthase activity2.92E-04
25GO:0004830: tryptophan-tRNA ligase activity2.92E-04
26GO:0003879: ATP phosphoribosyltransferase activity2.92E-04
27GO:0030941: chloroplast targeting sequence binding2.92E-04
28GO:0010347: L-galactose-1-phosphate phosphatase activity2.92E-04
29GO:0016784: 3-mercaptopyruvate sulfurtransferase activity2.92E-04
30GO:0035671: enone reductase activity2.92E-04
31GO:0004451: isocitrate lyase activity2.92E-04
32GO:0004856: xylulokinase activity2.92E-04
33GO:0047958: glycine:2-oxoglutarate aminotransferase activity2.92E-04
34GO:0016853: isomerase activity3.07E-04
35GO:0004310: farnesyl-diphosphate farnesyltransferase activity6.40E-04
36GO:0003862: 3-isopropylmalate dehydrogenase activity6.40E-04
37GO:0008883: glutamyl-tRNA reductase activity6.40E-04
38GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity6.40E-04
39GO:0052832: inositol monophosphate 3-phosphatase activity6.40E-04
40GO:0033201: alpha-1,4-glucan synthase activity6.40E-04
41GO:0004477: methenyltetrahydrofolate cyclohydrolase activity6.40E-04
42GO:0004829: threonine-tRNA ligase activity6.40E-04
43GO:0019156: isoamylase activity6.40E-04
44GO:0008934: inositol monophosphate 1-phosphatase activity6.40E-04
45GO:0052833: inositol monophosphate 4-phosphatase activity6.40E-04
46GO:0004848: ureidoglycolate hydrolase activity1.04E-03
47GO:0004148: dihydrolipoyl dehydrogenase activity1.04E-03
48GO:0030267: glyoxylate reductase (NADP) activity1.04E-03
49GO:0004096: catalase activity1.04E-03
50GO:0004180: carboxypeptidase activity1.04E-03
51GO:0010277: chlorophyllide a oxygenase [overall] activity1.04E-03
52GO:0004373: glycogen (starch) synthase activity1.04E-03
53GO:0003913: DNA photolyase activity1.04E-03
54GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.04E-03
55GO:0050307: sucrose-phosphate phosphatase activity1.04E-03
56GO:0032947: protein complex scaffold1.04E-03
57GO:0031409: pigment binding1.24E-03
58GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.48E-03
59GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.48E-03
60GO:0016851: magnesium chelatase activity1.48E-03
61GO:0009882: blue light photoreceptor activity1.48E-03
62GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.48E-03
63GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.48E-03
64GO:0048027: mRNA 5'-UTR binding1.48E-03
65GO:0003999: adenine phosphoribosyltransferase activity1.48E-03
66GO:0004792: thiosulfate sulfurtransferase activity1.48E-03
67GO:0004416: hydroxyacylglutathione hydrolase activity1.48E-03
68GO:0004176: ATP-dependent peptidase activity1.66E-03
69GO:0051537: 2 iron, 2 sulfur cluster binding1.69E-03
70GO:0022891: substrate-specific transmembrane transporter activity1.98E-03
71GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor1.99E-03
72GO:0043495: protein anchor1.99E-03
73GO:0008891: glycolate oxidase activity1.99E-03
74GO:0001053: plastid sigma factor activity1.99E-03
75GO:0005319: lipid transporter activity1.99E-03
76GO:0051861: glycolipid binding1.99E-03
77GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity1.99E-03
78GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1.99E-03
79GO:0016987: sigma factor activity1.99E-03
80GO:0009011: starch synthase activity1.99E-03
81GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.54E-03
82GO:0016773: phosphotransferase activity, alcohol group as acceptor2.54E-03
83GO:0030151: molybdenum ion binding2.54E-03
84GO:0004623: phospholipase A2 activity2.54E-03
85GO:0010181: FMN binding2.91E-03
86GO:0000293: ferric-chelate reductase activity3.14E-03
87GO:0004556: alpha-amylase activity3.14E-03
88GO:0048038: quinone binding3.34E-03
89GO:0016887: ATPase activity3.49E-03
90GO:0004559: alpha-mannosidase activity3.77E-03
91GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.77E-03
92GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.77E-03
93GO:0008237: metallopeptidase activity4.30E-03
94GO:0019899: enzyme binding4.45E-03
95GO:0004033: aldo-keto reductase (NADP) activity5.17E-03
96GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity5.92E-03
97GO:0008236: serine-type peptidase activity5.98E-03
98GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism6.71E-03
99GO:0008889: glycerophosphodiester phosphodiesterase activity6.71E-03
100GO:0050897: cobalt ion binding7.28E-03
101GO:0009055: electron carrier activity7.44E-03
102GO:0016844: strictosidine synthase activity7.54E-03
103GO:0045309: protein phosphorylated amino acid binding7.54E-03
104GO:0005381: iron ion transmembrane transporter activity7.54E-03
105GO:0019904: protein domain specific binding9.30E-03
106GO:0042802: identical protein binding9.56E-03
107GO:0005315: inorganic phosphate transmembrane transporter activity1.12E-02
108GO:0031072: heat shock protein binding1.12E-02
109GO:0000155: phosphorelay sensor kinase activity1.12E-02
110GO:0000287: magnesium ion binding1.20E-02
111GO:0051287: NAD binding1.25E-02
112GO:0005515: protein binding1.37E-02
113GO:0005506: iron ion binding1.47E-02
114GO:0001046: core promoter sequence-specific DNA binding1.54E-02
115GO:0051536: iron-sulfur cluster binding1.54E-02
116GO:0003727: single-stranded RNA binding2.12E-02
117GO:0008514: organic anion transmembrane transporter activity2.12E-02
118GO:0047134: protein-disulfide reductase activity2.25E-02
119GO:0004812: aminoacyl-tRNA ligase activity2.25E-02
120GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.56E-02
121GO:0003924: GTPase activity2.64E-02
122GO:0004791: thioredoxin-disulfide reductase activity2.64E-02
123GO:0046872: metal ion binding2.97E-02
124GO:0008565: protein transporter activity2.98E-02
125GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.19E-02
126GO:0008483: transaminase activity3.48E-02
127GO:0003743: translation initiation factor activity4.01E-02
128GO:0004222: metalloendopeptidase activity4.89E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast3.90E-52
2GO:0009535: chloroplast thylakoid membrane1.18E-24
3GO:0009941: chloroplast envelope4.84E-15
4GO:0009570: chloroplast stroma2.43E-14
5GO:0009534: chloroplast thylakoid1.87E-10
6GO:0031969: chloroplast membrane2.14E-06
7GO:0009579: thylakoid2.31E-06
8GO:0009706: chloroplast inner membrane6.80E-06
9GO:0010287: plastoglobule1.12E-05
10GO:0031977: thylakoid lumen1.48E-05
11GO:0009523: photosystem II2.23E-05
12GO:0042651: thylakoid membrane1.20E-04
13GO:0031972: chloroplast intermembrane space2.92E-04
14GO:0009782: photosystem I antenna complex2.92E-04
15GO:0080085: signal recognition particle, chloroplast targeting6.40E-04
16GO:0008290: F-actin capping protein complex6.40E-04
17GO:0009543: chloroplast thylakoid lumen8.44E-04
18GO:0009528: plastid inner membrane1.04E-03
19GO:0033281: TAT protein transport complex1.04E-03
20GO:0010007: magnesium chelatase complex1.04E-03
21GO:0009654: photosystem II oxygen evolving complex1.51E-03
22GO:0005777: peroxisome1.56E-03
23GO:0030286: dynein complex1.99E-03
24GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)1.99E-03
25GO:0009536: plastid2.29E-03
26GO:0010319: stromule4.30E-03
27GO:0009295: nucleoid4.30E-03
28GO:0031359: integral component of chloroplast outer membrane4.45E-03
29GO:0009501: amyloplast5.17E-03
30GO:0005786: signal recognition particle, endoplasmic reticulum targeting5.92E-03
31GO:0009514: glyoxysome5.92E-03
32GO:0009539: photosystem II reaction center5.92E-03
33GO:0042644: chloroplast nucleoid6.71E-03
34GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)6.71E-03
35GO:0009508: plastid chromosome1.12E-02
36GO:0030076: light-harvesting complex1.32E-02
37GO:0043234: protein complex1.43E-02
38GO:0005875: microtubule associated complex1.43E-02
39GO:0045271: respiratory chain complex I1.65E-02
40GO:0005747: mitochondrial respiratory chain complex I1.70E-02
41GO:0009532: plastid stroma1.76E-02
42GO:0005623: cell2.56E-02
43GO:0009522: photosystem I2.64E-02
44GO:0019898: extrinsic component of membrane2.77E-02
45GO:0005759: mitochondrial matrix3.13E-02
46GO:0005739: mitochondrion3.46E-02
47GO:0005778: peroxisomal membrane3.48E-02
48GO:0009707: chloroplast outer membrane4.57E-02
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Gene type



Gene DE type