co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G50210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009560: embryo sac egg cell differentiation	0.00E+00
2	GO:0090306: spindle assembly involved in meiosis	0.00E+00
3	GO:0007141: male meiosis I	0.00E+00
4	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
5	GO:0043487: regulation of RNA stability	0.00E+00
6	GO:0006904: vesicle docking involved in exocytosis	5.77E-05
7	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	8.24E-05
8	GO:0006562: proline catabolic process	9.50E-05
9	GO:0006887: exocytosis	1.85E-04
10	GO:0010155: regulation of proton transport	2.24E-04
11	GO:0010133: proline catabolic process to glutamate	2.24E-04
12	GO:0006611: protein export from nucleus	2.24E-04
13	GO:0019521: D-gluconate metabolic process	2.24E-04
14	GO:0010372: positive regulation of gibberellin biosynthetic process	2.24E-04
15	GO:0000055: ribosomal large subunit export from nucleus	3.73E-04
16	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	3.73E-04
17	GO:0046686: response to cadmium ion	4.92E-04
18	GO:0015696: ammonium transport	5.37E-04
19	GO:0007004: telomere maintenance via telomerase	5.37E-04
20	GO:0030100: regulation of endocytosis	5.37E-04
21	GO:0006537: glutamate biosynthetic process	5.37E-04
22	GO:0001709: cell fate determination	7.14E-04
23	GO:0033320: UDP-D-xylose biosynthetic process	7.14E-04
24	GO:0072488: ammonium transmembrane transport	7.14E-04
25	GO:0006536: glutamate metabolic process	7.14E-04
26	GO:0010107: potassium ion import	7.14E-04
27	GO:0045038: protein import into chloroplast thylakoid membrane	9.02E-04
28	GO:0007029: endoplasmic reticulum organization	9.02E-04
29	GO:0010337: regulation of salicylic acid metabolic process	1.10E-03
30	GO:0006014: D-ribose metabolic process	1.10E-03
31	GO:0016070: RNA metabolic process	1.10E-03
32	GO:0048232: male gamete generation	1.10E-03
33	GO:0042732: D-xylose metabolic process	1.10E-03
34	GO:0006796: phosphate-containing compound metabolic process	1.10E-03
35	GO:0006401: RNA catabolic process	1.54E-03
36	GO:0006955: immune response	1.54E-03
37	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.54E-03
38	GO:0048658: anther wall tapetum development	1.78E-03
39	GO:1900150: regulation of defense response to fungus	1.78E-03
40	GO:0006402: mRNA catabolic process	1.78E-03
41	GO:0010208: pollen wall assembly	2.03E-03
42	GO:0010200: response to chitin	2.27E-03
43	GO:0046685: response to arsenic-containing substance	2.29E-03
44	GO:0009051: pentose-phosphate shunt, oxidative branch	2.29E-03
45	GO:0000387: spliceosomal snRNP assembly	2.56E-03
46	GO:0051026: chiasma assembly	2.85E-03
47	GO:0009750: response to fructose	3.14E-03
48	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.44E-03
49	GO:0009408: response to heat	3.56E-03
50	GO:0034605: cellular response to heat	4.08E-03
51	GO:0009624: response to nematode	4.10E-03
52	GO:0046854: phosphatidylinositol phosphorylation	4.41E-03
53	GO:0009225: nucleotide-sugar metabolic process	4.41E-03
54	GO:0042753: positive regulation of circadian rhythm	4.75E-03
55	GO:0006406: mRNA export from nucleus	5.10E-03
56	GO:0009863: salicylic acid mediated signaling pathway	5.10E-03
57	GO:0061077: chaperone-mediated protein folding	5.83E-03
58	GO:0030433: ubiquitin-dependent ERAD pathway	6.20E-03
59	GO:0007131: reciprocal meiotic recombination	6.20E-03
60	GO:0006633: fatty acid biosynthetic process	6.42E-03
61	GO:0009686: gibberellin biosynthetic process	6.58E-03
62	GO:0009306: protein secretion	6.98E-03
63	GO:0010089: xylem development	6.98E-03
64	GO:0042147: retrograde transport, endosome to Golgi	7.38E-03
65	GO:0010501: RNA secondary structure unwinding	7.79E-03
66	GO:0010118: stomatal movement	7.79E-03
67	GO:0007166: cell surface receptor signaling pathway	8.07E-03
68	GO:0009749: response to glucose	9.06E-03
69	GO:0019252: starch biosynthetic process	9.06E-03
70	GO:0031047: gene silencing by RNA	9.96E-03
71	GO:0006457: protein folding	1.02E-02
72	GO:1901657: glycosyl compound metabolic process	1.04E-02
73	GO:0010090: trichome morphogenesis	1.04E-02
74	GO:0006310: DNA recombination	1.09E-02
75	GO:0007267: cell-cell signaling	1.14E-02
76	GO:0010286: heat acclimation	1.14E-02
77	GO:0001666: response to hypoxia	1.23E-02
78	GO:0009615: response to virus	1.23E-02
79	GO:0009816: defense response to bacterium, incompatible interaction	1.28E-02
80	GO:0008219: cell death	1.49E-02
81	GO:0009834: plant-type secondary cell wall biogenesis	1.59E-02
82	GO:0016310: phosphorylation	1.63E-02
83	GO:0016051: carbohydrate biosynthetic process	1.76E-02
84	GO:0009637: response to blue light	1.76E-02
85	GO:0006897: endocytosis	1.99E-02
86	GO:0009744: response to sucrose	2.10E-02
87	GO:0006397: mRNA processing	2.10E-02
88	GO:0016567: protein ubiquitination	2.25E-02
89	GO:0006260: DNA replication	2.41E-02
90	GO:0009873: ethylene-activated signaling pathway	2.59E-02
91	GO:0006364: rRNA processing	2.60E-02
92	GO:0006857: oligopeptide transport	2.73E-02
93	GO:0043086: negative regulation of catalytic activity	2.93E-02
94	GO:0009626: plant-type hypersensitive response	3.07E-02
95	GO:0009620: response to fungus	3.14E-02
96	GO:0006468: protein phosphorylation	3.25E-02
97	GO:0009553: embryo sac development	3.27E-02
98	GO:0009738: abscisic acid-activated signaling pathway	3.45E-02
99	GO:0009742: brassinosteroid mediated signaling pathway	3.49E-02
100	GO:0009416: response to light stimulus	3.56E-02
101	GO:0009555: pollen development	3.56E-02
102	GO:0000398: mRNA splicing, via spliceosome	3.70E-02
103	GO:0009845: seed germination	4.15E-02
104	GO:0006511: ubiquitin-dependent protein catabolic process	4.82E-02
105	GO:0007623: circadian rhythm	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0030621: U4 snRNA binding	0.00E+00
2	GO:0017070: U6 snRNA binding	1.37E-05
3	GO:0017151: DEAD/H-box RNA helicase binding	9.50E-05
4	GO:0008114: phosphogluconate 2-dehydrogenase activity	9.50E-05
5	GO:0030544: Hsp70 protein binding	9.50E-05
6	GO:0004657: proline dehydrogenase activity	9.50E-05
7	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	9.50E-05
8	GO:0043021: ribonucleoprotein complex binding	2.24E-04
9	GO:0070034: telomerase RNA binding	2.24E-04
10	GO:0036002: pre-mRNA binding	2.24E-04
11	GO:0004540: ribonuclease activity	3.65E-04
12	GO:0043023: ribosomal large subunit binding	5.37E-04
13	GO:0004351: glutamate decarboxylase activity	5.37E-04
14	GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity	5.37E-04
15	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	5.37E-04
16	GO:0008526: phosphatidylinositol transporter activity	7.14E-04
17	GO:0002020: protease binding	9.02E-04
18	GO:0009922: fatty acid elongase activity	9.02E-04
19	GO:0016462: pyrophosphatase activity	1.10E-03
20	GO:0008519: ammonium transmembrane transporter activity	1.10E-03
21	GO:0048040: UDP-glucuronate decarboxylase activity	1.10E-03
22	GO:0035673: oligopeptide transmembrane transporter activity	1.10E-03
23	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.31E-03
24	GO:0051020: GTPase binding	1.31E-03
25	GO:0070403: NAD+ binding	1.31E-03
26	GO:0004747: ribokinase activity	1.31E-03
27	GO:0008143: poly(A) binding	1.54E-03
28	GO:0004143: diacylglycerol kinase activity	1.54E-03
29	GO:0042162: telomeric DNA binding	1.54E-03
30	GO:0004427: inorganic diphosphatase activity	1.54E-03
31	GO:0005524: ATP binding	1.78E-03
32	GO:0008865: fructokinase activity	1.78E-03
33	GO:0003729: mRNA binding	1.89E-03
34	GO:0003951: NAD+ kinase activity	2.03E-03
35	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	2.85E-03
36	GO:0031625: ubiquitin protein ligase binding	3.20E-03
37	GO:0015198: oligopeptide transporter activity	3.44E-03
38	GO:0000175: 3'-5'-exoribonuclease activity	3.76E-03
39	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.75E-03
40	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.75E-03
41	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.75E-03
42	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.58E-03
43	GO:0016301: kinase activity	7.79E-03
44	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	8.97E-03
45	GO:0004518: nuclease activity	9.96E-03
46	GO:0004004: ATP-dependent RNA helicase activity	1.38E-02
47	GO:0102483: scopolin beta-glucosidase activity	1.38E-02
48	GO:0005509: calcium ion binding	1.63E-02
49	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.65E-02
50	GO:0008422: beta-glucosidase activity	1.87E-02
51	GO:0005515: protein binding	2.08E-02
52	GO:0004842: ubiquitin-protein transferase activity	2.71E-02
53	GO:0003779: actin binding	3.27E-02
54	GO:0003723: RNA binding	3.30E-02
55	GO:0051082: unfolded protein binding	3.34E-02
56	GO:0016746: transferase activity, transferring acyl groups	3.42E-02
57	GO:0008026: ATP-dependent helicase activity	3.49E-02
58	GO:0000166: nucleotide binding	3.56E-02
59	GO:0030170: pyridoxal phosphate binding	4.23E-02
60	GO:0046910: pectinesterase inhibitor activity	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0000145: exocyst	4.31E-05
2	GO:0000932: P-body	6.89E-05
3	GO:0010494: cytoplasmic stress granule	8.24E-05
4	GO:0016442: RISC complex	9.50E-05
5	GO:0080085: signal recognition particle, chloroplast targeting	2.24E-04
6	GO:0071007: U2-type catalytic step 2 spliceosome	2.24E-04
7	GO:0005697: telomerase holoenzyme complex	2.24E-04
8	GO:0008287: protein serine/threonine phosphatase complex	3.73E-04
9	GO:0017053: transcriptional repressor complex	3.73E-04
10	GO:0071006: U2-type catalytic step 1 spliceosome	5.37E-04
11	GO:0005886: plasma membrane	6.56E-04
12	GO:0000178: exosome (RNase complex)	9.02E-04
13	GO:0000974: Prp19 complex	1.10E-03
14	GO:0016363: nuclear matrix	1.31E-03
15	GO:0046540: U4/U6 x U5 tri-snRNP complex	2.03E-03
16	GO:0048471: perinuclear region of cytoplasm	3.14E-03
17	GO:0010008: endosome membrane	3.52E-03
18	GO:0019013: viral nucleocapsid	3.76E-03
19	GO:0000790: nuclear chromatin	7.38E-03
20	GO:0032580: Golgi cisterna membrane	1.09E-02
21	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.20E-02
22	GO:0009506: plasmodesma	1.22E-02
23	GO:0005788: endoplasmic reticulum lumen	1.28E-02
24	GO:0019005: SCF ubiquitin ligase complex	1.49E-02
25	GO:0005768: endosome	1.58E-02
26	GO:0031902: late endosome membrane	1.99E-02
27	GO:0005634: nucleus	2.36E-02
28	GO:0005635: nuclear envelope	2.73E-02
29	GO:0005681: spliceosomal complex	2.93E-02
30	GO:0016607: nuclear speck	3.00E-02
31	GO:0005829: cytosol	3.00E-02
32	GO:0012505: endomembrane system	3.27E-02