Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G49970

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway0.00E+00
2GO:0016123: xanthophyll biosynthetic process1.68E-07
3GO:0016120: carotene biosynthetic process1.68E-07
4GO:0010362: negative regulation of anion channel activity by blue light6.71E-06
5GO:0016117: carotenoid biosynthetic process1.26E-05
6GO:0080005: photosystem stoichiometry adjustment1.83E-05
7GO:0050688: regulation of defense response to virus1.83E-05
8GO:0006696: ergosterol biosynthetic process3.35E-05
9GO:0051289: protein homotetramerization5.17E-05
10GO:0009902: chloroplast relocation7.23E-05
11GO:0009765: photosynthesis, light harvesting7.23E-05
12GO:0045038: protein import into chloroplast thylakoid membrane9.53E-05
13GO:0009616: virus induced gene silencing9.53E-05
14GO:0006401: RNA catabolic process1.74E-04
15GO:1900056: negative regulation of leaf senescence1.74E-04
16GO:0010050: vegetative phase change1.74E-04
17GO:0006402: mRNA catabolic process2.03E-04
18GO:0010267: production of ta-siRNAs involved in RNA interference2.95E-04
19GO:0009638: phototropism2.95E-04
20GO:0010380: regulation of chlorophyll biosynthetic process2.95E-04
21GO:0031425: chloroplast RNA processing2.95E-04
22GO:0045036: protein targeting to chloroplast3.28E-04
23GO:0009658: chloroplast organization4.23E-04
24GO:0010025: wax biosynthetic process5.39E-04
25GO:0046777: protein autophosphorylation5.55E-04
26GO:0008033: tRNA processing8.55E-04
27GO:0010118: stomatal movement8.55E-04
28GO:0009791: post-embryonic development9.82E-04
29GO:0006508: proteolysis1.05E-03
30GO:0051607: defense response to virus1.25E-03
31GO:0009816: defense response to bacterium, incompatible interaction1.35E-03
32GO:0015995: chlorophyll biosynthetic process1.45E-03
33GO:0018298: protein-chromophore linkage1.55E-03
34GO:0000160: phosphorelay signal transduction system1.60E-03
35GO:0006457: protein folding1.67E-03
36GO:0009910: negative regulation of flower development1.70E-03
37GO:0009637: response to blue light1.81E-03
38GO:0009644: response to high light intensity2.26E-03
39GO:0006364: rRNA processing2.62E-03
40GO:0051603: proteolysis involved in cellular protein catabolic process2.68E-03
41GO:0016036: cellular response to phosphate starvation4.59E-03
42GO:0007623: circadian rhythm4.81E-03
43GO:0010228: vegetative to reproductive phase transition of meristem4.97E-03
44GO:0010468: regulation of gene expression5.44E-03
45GO:0006397: mRNA processing1.02E-02
46GO:0009735: response to cytokinin1.40E-02
47GO:0035556: intracellular signal transduction1.55E-02
48GO:0045893: positive regulation of transcription, DNA-templated1.64E-02
49GO:0046686: response to cadmium ion3.37E-02
50GO:0007275: multicellular organism development3.98E-02
51GO:0009793: embryo development ending in seed dormancy4.47E-02
RankGO TermAdjusted P value
1GO:0070009: serine-type aminopeptidase activity0.00E+00
2GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
3GO:0045435: lycopene epsilon cyclase activity0.00E+00
4GO:0046905: phytoene synthase activity0.00E+00
5GO:0030941: chloroplast targeting sequence binding6.71E-06
6GO:0004654: polyribonucleotide nucleotidyltransferase activity6.71E-06
7GO:0051996: squalene synthase activity6.71E-06
8GO:0004310: farnesyl-diphosphate farnesyltransferase activity1.83E-05
9GO:0004180: carboxypeptidase activity3.35E-05
10GO:0009882: blue light photoreceptor activity5.17E-05
11GO:0051861: glycolipid binding7.23E-05
12GO:0042802: identical protein binding3.49E-04
13GO:0000155: phosphorelay sensor kinase activity4.30E-04
14GO:0000175: 3'-5'-exoribonuclease activity4.30E-04
15GO:0010181: FMN binding9.39E-04
16GO:0008236: serine-type peptidase activity1.50E-03
17GO:0004185: serine-type carboxypeptidase activity2.14E-03
18GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.93E-03
19GO:0003723: RNA binding2.01E-02
20GO:0005515: protein binding2.96E-02
21GO:0016301: kinase activity4.32E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast6.36E-09
2GO:0080085: signal recognition particle, chloroplast targeting1.83E-05
3GO:0005655: nucleolar ribonuclease P complex1.46E-04
4GO:0009706: chloroplast inner membrane1.55E-04
5GO:0031359: integral component of chloroplast outer membrane1.74E-04
6GO:0005786: signal recognition particle, endoplasmic reticulum targeting2.33E-04
7GO:0048471: perinuclear region of cytoplasm3.61E-04
8GO:0031969: chloroplast membrane5.21E-04
9GO:0009707: chloroplast outer membrane1.55E-03
10GO:0009941: chloroplast envelope1.78E-03
11GO:0009570: chloroplast stroma2.70E-03
12GO:0010287: plastoglobule3.73E-03
13GO:0005623: cell3.93E-03
14GO:0005773: vacuole1.36E-02
15GO:0005622: intracellular2.24E-02
16GO:0009536: plastid2.84E-02
17GO:0009535: chloroplast thylakoid membrane4.37E-02
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Gene type



Gene DE type