Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G49900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process0.00E+00
2GO:0019593: mannitol biosynthetic process0.00E+00
3GO:0046398: UDP-glucuronate metabolic process0.00E+00
4GO:0071289: cellular response to nickel ion0.00E+00
5GO:0052573: UDP-D-galactose metabolic process0.00E+00
6GO:0070328: triglyceride homeostasis0.00E+00
7GO:0055091: phospholipid homeostasis0.00E+00
8GO:0042353: fucose biosynthetic process0.00E+00
9GO:0034775: glutathione transmembrane transport0.00E+00
10GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
11GO:0010046: response to mycotoxin0.00E+00
12GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
13GO:0010200: response to chitin3.51E-10
14GO:0006751: glutathione catabolic process1.32E-06
15GO:0009737: response to abscisic acid1.41E-06
16GO:0009611: response to wounding5.29E-06
17GO:0042344: indole glucosinolate catabolic process1.15E-05
18GO:0009873: ethylene-activated signaling pathway1.26E-05
19GO:2000280: regulation of root development1.54E-05
20GO:0052544: defense response by callose deposition in cell wall2.60E-05
21GO:0070588: calcium ion transmembrane transport5.91E-05
22GO:0006970: response to osmotic stress7.87E-05
23GO:0009695: jasmonic acid biosynthetic process9.59E-05
24GO:0031408: oxylipin biosynthetic process1.11E-04
25GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.96E-04
26GO:0006955: immune response1.96E-04
27GO:0009555: pollen development2.06E-04
28GO:2000070: regulation of response to water deprivation2.48E-04
29GO:0034472: snRNA 3'-end processing2.63E-04
30GO:0051180: vitamin transport2.63E-04
31GO:0009609: response to symbiotic bacterium2.63E-04
32GO:0030974: thiamine pyrophosphate transport2.63E-04
33GO:0046938: phytochelatin biosynthetic process2.63E-04
34GO:0009865: pollen tube adhesion2.63E-04
35GO:0050691: regulation of defense response to virus by host2.63E-04
36GO:0009414: response to water deprivation2.72E-04
37GO:0010193: response to ozone3.02E-04
38GO:0098656: anion transmembrane transport3.70E-04
39GO:0010507: negative regulation of autophagy5.78E-04
40GO:0031407: oxylipin metabolic process5.78E-04
41GO:0042754: negative regulation of circadian rhythm5.78E-04
42GO:0010289: homogalacturonan biosynthetic process5.78E-04
43GO:0055088: lipid homeostasis5.78E-04
44GO:0006741: NADP biosynthetic process5.78E-04
45GO:2000030: regulation of response to red or far red light5.78E-04
46GO:0015786: UDP-glucose transport5.78E-04
47GO:1901679: nucleotide transmembrane transport5.78E-04
48GO:0006898: receptor-mediated endocytosis5.78E-04
49GO:0015893: drug transport5.78E-04
50GO:0052542: defense response by callose deposition5.78E-04
51GO:0006811: ion transport7.76E-04
52GO:0090630: activation of GTPase activity9.39E-04
53GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid9.39E-04
54GO:0015783: GDP-fucose transport9.39E-04
55GO:0010325: raffinose family oligosaccharide biosynthetic process9.39E-04
56GO:0019674: NAD metabolic process9.39E-04
57GO:0006011: UDP-glucose metabolic process9.39E-04
58GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'9.39E-04
59GO:0080168: abscisic acid transport9.39E-04
60GO:0006598: polyamine catabolic process9.39E-04
61GO:0016045: detection of bacterium9.39E-04
62GO:0010359: regulation of anion channel activity9.39E-04
63GO:0080121: AMP transport9.39E-04
64GO:0010288: response to lead ion9.39E-04
65GO:0009969: xyloglucan biosynthetic process9.62E-04
66GO:0009863: salicylic acid mediated signaling pathway1.18E-03
67GO:0009751: response to salicylic acid1.20E-03
68GO:0006470: protein dephosphorylation1.33E-03
69GO:0055089: fatty acid homeostasis1.34E-03
70GO:0019363: pyridine nucleotide biosynthetic process1.34E-03
71GO:0010371: regulation of gibberellin biosynthetic process1.34E-03
72GO:0072334: UDP-galactose transmembrane transport1.34E-03
73GO:0033014: tetrapyrrole biosynthetic process1.34E-03
74GO:0030100: regulation of endocytosis1.34E-03
75GO:0009226: nucleotide-sugar biosynthetic process1.34E-03
76GO:0015700: arsenite transport1.34E-03
77GO:0045727: positive regulation of translation1.79E-03
78GO:0033356: UDP-L-arabinose metabolic process1.79E-03
79GO:0042991: transcription factor import into nucleus1.79E-03
80GO:0034440: lipid oxidation1.79E-03
81GO:0015867: ATP transport1.79E-03
82GO:1902347: response to strigolactone1.79E-03
83GO:0009694: jasmonic acid metabolic process1.79E-03
84GO:0009651: response to salt stress1.97E-03
85GO:0009409: response to cold2.02E-03
86GO:0006665: sphingolipid metabolic process2.29E-03
87GO:0009247: glycolipid biosynthetic process2.29E-03
88GO:0045487: gibberellin catabolic process2.29E-03
89GO:0009620: response to fungus2.57E-03
90GO:0015866: ADP transport2.82E-03
91GO:0010256: endomembrane system organization2.82E-03
92GO:0047484: regulation of response to osmotic stress2.82E-03
93GO:0010337: regulation of salicylic acid metabolic process2.82E-03
94GO:0035435: phosphate ion transmembrane transport2.82E-03
95GO:0009861: jasmonic acid and ethylene-dependent systemic resistance3.40E-03
96GO:0010555: response to mannitol3.40E-03
97GO:0080086: stamen filament development3.40E-03
98GO:1901001: negative regulation of response to salt stress3.40E-03
99GO:0098655: cation transmembrane transport3.40E-03
100GO:0019760: glucosinolate metabolic process3.47E-03
101GO:0009639: response to red or far red light3.47E-03
102GO:0006401: RNA catabolic process4.00E-03
103GO:0010161: red light signaling pathway4.00E-03
104GO:1902074: response to salt4.00E-03
105GO:0007155: cell adhesion4.65E-03
106GO:1900150: regulation of defense response to fungus4.65E-03
107GO:0019375: galactolipid biosynthetic process4.65E-03
108GO:0009415: response to water4.65E-03
109GO:0009790: embryo development4.67E-03
110GO:0009699: phenylpropanoid biosynthetic process5.32E-03
111GO:0048193: Golgi vesicle transport5.32E-03
112GO:0007623: circadian rhythm5.78E-03
113GO:0046685: response to arsenic-containing substance6.03E-03
114GO:0051865: protein autoubiquitination6.03E-03
115GO:0090305: nucleic acid phosphodiester bond hydrolysis6.03E-03
116GO:0006783: heme biosynthetic process6.03E-03
117GO:0006779: porphyrin-containing compound biosynthetic process6.77E-03
118GO:0010018: far-red light signaling pathway6.77E-03
119GO:0007346: regulation of mitotic cell cycle6.77E-03
120GO:0006468: protein phosphorylation6.91E-03
121GO:0010468: regulation of gene expression7.24E-03
122GO:0009617: response to bacterium7.24E-03
123GO:0055062: phosphate ion homeostasis7.54E-03
124GO:0006782: protoporphyrinogen IX biosynthetic process7.54E-03
125GO:0019538: protein metabolic process7.54E-03
126GO:0006839: mitochondrial transport7.79E-03
127GO:0030148: sphingolipid biosynthetic process8.35E-03
128GO:0010015: root morphogenesis8.35E-03
129GO:0009698: phenylpropanoid metabolic process8.35E-03
130GO:0009682: induced systemic resistance8.35E-03
131GO:0046686: response to cadmium ion8.40E-03
132GO:0051707: response to other organism8.82E-03
133GO:0009640: photomorphogenesis8.82E-03
134GO:0071365: cellular response to auxin stimulus9.17E-03
135GO:0010105: negative regulation of ethylene-activated signaling pathway9.17E-03
136GO:0050826: response to freezing1.00E-02
137GO:0018107: peptidyl-threonine phosphorylation1.00E-02
138GO:0055046: microgametogenesis1.00E-02
139GO:0005986: sucrose biosynthetic process1.00E-02
140GO:0048467: gynoecium development1.09E-02
141GO:0002237: response to molecule of bacterial origin1.09E-02
142GO:0042538: hyperosmotic salinity response1.11E-02
143GO:0006979: response to oxidative stress1.17E-02
144GO:0009901: anther dehiscence1.18E-02
145GO:0071732: cellular response to nitric oxide1.18E-02
146GO:0009585: red, far-red light phototransduction1.19E-02
147GO:0009833: plant-type primary cell wall biogenesis1.28E-02
148GO:0042753: positive regulation of circadian rhythm1.28E-02
149GO:0006636: unsaturated fatty acid biosynthetic process1.28E-02
150GO:0035556: intracellular signal transduction1.37E-02
151GO:2000377: regulation of reactive oxygen species metabolic process1.38E-02
152GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.38E-02
153GO:0009269: response to desiccation1.58E-02
154GO:0051321: meiotic cell cycle1.58E-02
155GO:0016998: cell wall macromolecule catabolic process1.58E-02
156GO:0031348: negative regulation of defense response1.68E-02
157GO:0030245: cellulose catabolic process1.68E-02
158GO:0030433: ubiquitin-dependent ERAD pathway1.68E-02
159GO:0009624: response to nematode1.70E-02
160GO:0006952: defense response1.72E-02
161GO:0001944: vasculature development1.79E-02
162GO:0009686: gibberellin biosynthetic process1.79E-02
163GO:0071369: cellular response to ethylene stimulus1.79E-02
164GO:0040007: growth1.79E-02
165GO:0010584: pollen exine formation1.90E-02
166GO:0048443: stamen development1.90E-02
167GO:0000398: mRNA splicing, via spliceosome1.96E-02
168GO:0048653: anther development2.13E-02
169GO:0000271: polysaccharide biosynthetic process2.13E-02
170GO:0048868: pollen tube development2.24E-02
171GO:0045489: pectin biosynthetic process2.24E-02
172GO:0006814: sodium ion transport2.36E-02
173GO:0048544: recognition of pollen2.36E-02
174GO:0009753: response to jasmonic acid2.37E-02
175GO:0009749: response to glucose2.48E-02
176GO:0008654: phospholipid biosynthetic process2.48E-02
177GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.61E-02
178GO:0000302: response to reactive oxygen species2.61E-02
179GO:0006633: fatty acid biosynthetic process2.68E-02
180GO:1901657: glycosyl compound metabolic process2.86E-02
181GO:0071281: cellular response to iron ion2.86E-02
182GO:0010150: leaf senescence2.94E-02
183GO:0010286: heat acclimation3.12E-02
184GO:0006355: regulation of transcription, DNA-templated3.18E-02
185GO:0051607: defense response to virus3.25E-02
186GO:0010027: thylakoid membrane organization3.39E-02
187GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.52E-02
188GO:0010029: regulation of seed germination3.52E-02
189GO:0009816: defense response to bacterium, incompatible interaction3.52E-02
190GO:0042742: defense response to bacterium3.59E-02
191GO:0009627: systemic acquired resistance3.66E-02
192GO:0015995: chlorophyll biosynthetic process3.80E-02
193GO:0010411: xyloglucan metabolic process3.80E-02
194GO:0016049: cell growth3.95E-02
195GO:0007165: signal transduction3.99E-02
196GO:0008219: cell death4.09E-02
197GO:0009817: defense response to fungus, incompatible interaction4.09E-02
198GO:0048481: plant ovule development4.09E-02
199GO:0048767: root hair elongation4.24E-02
200GO:0010119: regulation of stomatal movement4.53E-02
201GO:0009631: cold acclimation4.53E-02
202GO:0045087: innate immune response4.84E-02
203GO:0016051: carbohydrate biosynthetic process4.84E-02
RankGO TermAdjusted P value
1GO:0080123: jasmonate-amino synthetase activity0.00E+00
2GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
3GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity0.00E+00
4GO:0070566: adenylyltransferase activity0.00E+00
5GO:0017048: Rho GTPase binding0.00E+00
6GO:0008419: RNA lariat debranching enzyme activity0.00E+00
7GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity0.00E+00
8GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity0.00E+00
9GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity0.00E+00
10GO:0042171: lysophosphatidic acid acyltransferase activity0.00E+00
11GO:0047350: glucuronate-1-phosphate uridylyltransferase activity0.00E+00
12GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.03E-07
13GO:0016629: 12-oxophytodienoate reductase activity3.18E-06
14GO:0003840: gamma-glutamyltransferase activity1.15E-05
15GO:0036374: glutathione hydrolase activity1.15E-05
16GO:0010181: FMN binding2.50E-04
17GO:0042736: NADH kinase activity2.63E-04
18GO:0052894: norspermine:oxygen oxidoreductase activity2.63E-04
19GO:0090422: thiamine pyrophosphate transporter activity2.63E-04
20GO:0015085: calcium ion transmembrane transporter activity2.63E-04
21GO:0046870: cadmium ion binding2.63E-04
22GO:0015446: ATPase-coupled arsenite transmembrane transporter activity2.63E-04
23GO:0071992: phytochelatin transmembrane transporter activity2.63E-04
24GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity2.63E-04
25GO:0090440: abscisic acid transporter activity2.63E-04
26GO:0004103: choline kinase activity5.78E-04
27GO:0008883: glutamyl-tRNA reductase activity5.78E-04
28GO:0001047: core promoter binding5.78E-04
29GO:0042389: omega-3 fatty acid desaturase activity5.78E-04
30GO:0017040: ceramidase activity5.78E-04
31GO:0003839: gamma-glutamylcyclotransferase activity5.78E-04
32GO:0003958: NADPH-hemoprotein reductase activity5.78E-04
33GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity5.78E-04
34GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity5.78E-04
35GO:0017022: myosin binding5.78E-04
36GO:0019888: protein phosphatase regulator activity7.67E-04
37GO:0005388: calcium-transporting ATPase activity7.67E-04
38GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity9.39E-04
39GO:0005457: GDP-fucose transmembrane transporter activity9.39E-04
40GO:0046592: polyamine oxidase activity9.39E-04
41GO:0047274: galactinol-sucrose galactosyltransferase activity9.39E-04
42GO:0004758: serine C-palmitoyltransferase activity9.39E-04
43GO:0046423: allene-oxide cyclase activity9.39E-04
44GO:0004383: guanylate cyclase activity9.39E-04
45GO:0016165: linoleate 13S-lipoxygenase activity9.39E-04
46GO:0004722: protein serine/threonine phosphatase activity1.00E-03
47GO:0015297: antiporter activity1.01E-03
48GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.34E-03
49GO:0001653: peptide receptor activity1.34E-03
50GO:0033843: xyloglucan 6-xylosyltransferase activity1.34E-03
51GO:0035250: UDP-galactosyltransferase activity1.34E-03
52GO:0005432: calcium:sodium antiporter activity1.34E-03
53GO:0005460: UDP-glucose transmembrane transporter activity1.34E-03
54GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity1.79E-03
55GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.29E-03
56GO:0009922: fatty acid elongase activity2.29E-03
57GO:0005459: UDP-galactose transmembrane transporter activity2.29E-03
58GO:0004623: phospholipase A2 activity2.29E-03
59GO:0080122: AMP transmembrane transporter activity2.29E-03
60GO:0016301: kinase activity2.68E-03
61GO:0019137: thioglucosidase activity2.82E-03
62GO:0015217: ADP transmembrane transporter activity3.40E-03
63GO:0005347: ATP transmembrane transporter activity3.40E-03
64GO:0044212: transcription regulatory region DNA binding3.53E-03
65GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.68E-03
66GO:0016621: cinnamoyl-CoA reductase activity4.00E-03
67GO:0019899: enzyme binding4.00E-03
68GO:0015491: cation:cation antiporter activity4.65E-03
69GO:0102483: scopolin beta-glucosidase activity4.87E-03
70GO:0004721: phosphoprotein phosphatase activity4.87E-03
71GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water5.32E-03
72GO:0003951: NAD+ kinase activity5.32E-03
73GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds5.49E-03
74GO:0005096: GTPase activator activity5.67E-03
75GO:0005516: calmodulin binding6.90E-03
76GO:0008422: beta-glucosidase activity7.47E-03
77GO:0004672: protein kinase activity7.49E-03
78GO:0005262: calcium channel activity1.00E-02
79GO:0015114: phosphate ion transmembrane transporter activity1.00E-02
80GO:0000175: 3'-5'-exoribonuclease activity1.00E-02
81GO:0005315: inorganic phosphate transmembrane transporter activity1.00E-02
82GO:0008131: primary amine oxidase activity1.09E-02
83GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.28E-02
84GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.28E-02
85GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.28E-02
86GO:0004674: protein serine/threonine kinase activity1.31E-02
87GO:0004857: enzyme inhibitor activity1.38E-02
88GO:0051087: chaperone binding1.48E-02
89GO:0004540: ribonuclease activity1.58E-02
90GO:0004707: MAP kinase activity1.58E-02
91GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.68E-02
92GO:0008514: organic anion transmembrane transporter activity1.90E-02
93GO:0004842: ubiquitin-protein transferase activity2.01E-02
94GO:0016758: transferase activity, transferring hexosyl groups2.07E-02
95GO:0050662: coenzyme binding2.36E-02
96GO:0004518: nuclease activity2.73E-02
97GO:0005524: ATP binding3.06E-02
98GO:0046872: metal ion binding3.29E-02
99GO:0003700: transcription factor activity, sequence-specific DNA binding3.61E-02
100GO:0016757: transferase activity, transferring glycosyl groups3.69E-02
101GO:0004004: ATP-dependent RNA helicase activity3.80E-02
102GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.95E-02
103GO:0015238: drug transmembrane transporter activity4.24E-02
104GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.38E-02
RankGO TermAdjusted P value
1GO:0032039: integrator complex0.00E+00
2GO:0070382: exocytic vesicle2.63E-04
3GO:0030133: transport vesicle5.78E-04
4GO:0042170: plastid membrane5.78E-04
5GO:0000159: protein phosphatase type 2A complex5.92E-04
6GO:0045177: apical part of cell1.34E-03
7GO:0000178: exosome (RNase complex)2.29E-03
8GO:0031463: Cul3-RING ubiquitin ligase complex2.82E-03
9GO:0005768: endosome2.86E-03
10GO:0030173: integral component of Golgi membrane3.40E-03
11GO:0016604: nuclear body6.77E-03
12GO:0005634: nucleus8.15E-03
13GO:0090406: pollen tube8.82E-03
14GO:0005938: cell cortex1.00E-02
15GO:0005737: cytoplasm1.62E-02
16GO:0009706: chloroplast inner membrane1.70E-02
17GO:0000139: Golgi membrane1.94E-02
18GO:0005743: mitochondrial inner membrane1.98E-02
19GO:0030136: clathrin-coated vesicle2.01E-02
20GO:0005770: late endosome2.24E-02
21GO:0016021: integral component of membrane2.25E-02
22GO:0005802: trans-Golgi network2.55E-02
23GO:0032580: Golgi cisterna membrane2.99E-02
24GO:0000932: P-body3.39E-02
25GO:0046658: anchored component of plasma membrane3.89E-02
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Gene type



Gene DE type