GO Enrichment Analysis of Co-expressed Genes with
AT5G49650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0098586: cellular response to virus | 0.00E+00 |
| 4 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 5 | GO:0051246: regulation of protein metabolic process | 0.00E+00 |
| 6 | GO:0080005: photosystem stoichiometry adjustment | 2.26E-07 |
| 7 | GO:0006013: mannose metabolic process | 8.71E-07 |
| 8 | GO:0009658: chloroplast organization | 5.41E-06 |
| 9 | GO:0010190: cytochrome b6f complex assembly | 1.04E-05 |
| 10 | GO:0055114: oxidation-reduction process | 2.74E-05 |
| 11 | GO:0009657: plastid organization | 3.49E-05 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 3.79E-05 |
| 13 | GO:0031426: polycistronic mRNA processing | 6.26E-05 |
| 14 | GO:0071461: cellular response to redox state | 6.26E-05 |
| 15 | GO:0010362: negative regulation of anion channel activity by blue light | 6.26E-05 |
| 16 | GO:0033388: putrescine biosynthetic process from arginine | 6.26E-05 |
| 17 | GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 6.26E-05 |
| 18 | GO:0009853: photorespiration | 6.42E-05 |
| 19 | GO:0005986: sucrose biosynthetic process | 1.03E-04 |
| 20 | GO:0000256: allantoin catabolic process | 1.52E-04 |
| 21 | GO:0009446: putrescine biosynthetic process | 1.52E-04 |
| 22 | GO:0046741: transport of virus in host, tissue to tissue | 1.52E-04 |
| 23 | GO:0042853: L-alanine catabolic process | 1.52E-04 |
| 24 | GO:0042548: regulation of photosynthesis, light reaction | 1.52E-04 |
| 25 | GO:0010136: ureide catabolic process | 2.57E-04 |
| 26 | GO:0071836: nectar secretion | 2.57E-04 |
| 27 | GO:0005977: glycogen metabolic process | 2.57E-04 |
| 28 | GO:0043572: plastid fission | 3.73E-04 |
| 29 | GO:2001141: regulation of RNA biosynthetic process | 3.73E-04 |
| 30 | GO:0046653: tetrahydrofolate metabolic process | 3.73E-04 |
| 31 | GO:0010239: chloroplast mRNA processing | 3.73E-04 |
| 32 | GO:0006809: nitric oxide biosynthetic process | 3.73E-04 |
| 33 | GO:0006145: purine nucleobase catabolic process | 3.73E-04 |
| 34 | GO:0051016: barbed-end actin filament capping | 3.73E-04 |
| 35 | GO:0009902: chloroplast relocation | 4.99E-04 |
| 36 | GO:0010021: amylopectin biosynthetic process | 4.99E-04 |
| 37 | GO:0009765: photosynthesis, light harvesting | 4.99E-04 |
| 38 | GO:0006552: leucine catabolic process | 4.99E-04 |
| 39 | GO:0016123: xanthophyll biosynthetic process | 6.32E-04 |
| 40 | GO:0016120: carotene biosynthetic process | 6.32E-04 |
| 41 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 7.73E-04 |
| 42 | GO:0009643: photosynthetic acclimation | 7.73E-04 |
| 43 | GO:0048528: post-embryonic root development | 1.07E-03 |
| 44 | GO:1900056: negative regulation of leaf senescence | 1.07E-03 |
| 45 | GO:0009396: folic acid-containing compound biosynthetic process | 1.07E-03 |
| 46 | GO:0006102: isocitrate metabolic process | 1.24E-03 |
| 47 | GO:0044030: regulation of DNA methylation | 1.41E-03 |
| 48 | GO:0071482: cellular response to light stimulus | 1.41E-03 |
| 49 | GO:0019432: triglyceride biosynthetic process | 1.58E-03 |
| 50 | GO:0048507: meristem development | 1.58E-03 |
| 51 | GO:0009638: phototropism | 1.77E-03 |
| 52 | GO:0035999: tetrahydrofolate interconversion | 1.77E-03 |
| 53 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.77E-03 |
| 54 | GO:0006259: DNA metabolic process | 1.96E-03 |
| 55 | GO:0006265: DNA topological change | 2.17E-03 |
| 56 | GO:0006352: DNA-templated transcription, initiation | 2.17E-03 |
| 57 | GO:0016485: protein processing | 2.17E-03 |
| 58 | GO:0009767: photosynthetic electron transport chain | 2.58E-03 |
| 59 | GO:0006807: nitrogen compound metabolic process | 2.58E-03 |
| 60 | GO:0010207: photosystem II assembly | 2.80E-03 |
| 61 | GO:0010020: chloroplast fission | 2.80E-03 |
| 62 | GO:0006071: glycerol metabolic process | 3.26E-03 |
| 63 | GO:0051302: regulation of cell division | 3.74E-03 |
| 64 | GO:0006366: transcription from RNA polymerase II promoter | 3.98E-03 |
| 65 | GO:0007623: circadian rhythm | 4.06E-03 |
| 66 | GO:0006730: one-carbon metabolic process | 4.24E-03 |
| 67 | GO:0010468: regulation of gene expression | 4.84E-03 |
| 68 | GO:0016117: carotenoid biosynthetic process | 5.03E-03 |
| 69 | GO:0010118: stomatal movement | 5.31E-03 |
| 70 | GO:0042335: cuticle development | 5.31E-03 |
| 71 | GO:0006662: glycerol ether metabolic process | 5.59E-03 |
| 72 | GO:0007059: chromosome segregation | 5.88E-03 |
| 73 | GO:0019252: starch biosynthetic process | 6.17E-03 |
| 74 | GO:0009791: post-embryonic development | 6.17E-03 |
| 75 | GO:0000302: response to reactive oxygen species | 6.46E-03 |
| 76 | GO:0010193: response to ozone | 6.46E-03 |
| 77 | GO:0046777: protein autophosphorylation | 8.31E-03 |
| 78 | GO:0010027: thylakoid membrane organization | 8.35E-03 |
| 79 | GO:0015979: photosynthesis | 8.87E-03 |
| 80 | GO:0045454: cell redox homeostasis | 9.31E-03 |
| 81 | GO:0018298: protein-chromophore linkage | 1.01E-02 |
| 82 | GO:0000160: phosphorelay signal transduction system | 1.04E-02 |
| 83 | GO:0006811: ion transport | 1.08E-02 |
| 84 | GO:0007568: aging | 1.11E-02 |
| 85 | GO:0009910: negative regulation of flower development | 1.11E-02 |
| 86 | GO:0006865: amino acid transport | 1.15E-02 |
| 87 | GO:0009637: response to blue light | 1.19E-02 |
| 88 | GO:0034599: cellular response to oxidative stress | 1.23E-02 |
| 89 | GO:0006099: tricarboxylic acid cycle | 1.23E-02 |
| 90 | GO:0010114: response to red light | 1.42E-02 |
| 91 | GO:0005975: carbohydrate metabolic process | 1.51E-02 |
| 92 | GO:0046686: response to cadmium ion | 1.56E-02 |
| 93 | GO:0009735: response to cytokinin | 1.87E-02 |
| 94 | GO:0006417: regulation of translation | 1.89E-02 |
| 95 | GO:0006096: glycolytic process | 1.98E-02 |
| 96 | GO:0035556: intracellular signal transduction | 2.16E-02 |
| 97 | GO:0009624: response to nematode | 2.25E-02 |
| 98 | GO:0006396: RNA processing | 2.30E-02 |
| 99 | GO:0009058: biosynthetic process | 2.75E-02 |
| 100 | GO:0006508: proteolysis | 3.65E-02 |
| 101 | GO:0007049: cell cycle | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050126: N-carbamoylputrescine amidase activity | 0.00E+00 |
| 2 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 3 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 4 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 5 | GO:0004559: alpha-mannosidase activity | 1.50E-05 |
| 6 | GO:0004485: methylcrotonoyl-CoA carboxylase activity | 6.26E-05 |
| 7 | GO:0035671: enone reductase activity | 6.26E-05 |
| 8 | GO:0046027: phospholipid:diacylglycerol acyltransferase activity | 6.26E-05 |
| 9 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 6.26E-05 |
| 10 | GO:0019156: isoamylase activity | 1.52E-04 |
| 11 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 1.52E-04 |
| 12 | GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity | 1.52E-04 |
| 13 | GO:0004477: methenyltetrahydrofolate cyclohydrolase activity | 1.52E-04 |
| 14 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 2.57E-04 |
| 15 | GO:0050307: sucrose-phosphate phosphatase activity | 2.57E-04 |
| 16 | GO:0004075: biotin carboxylase activity | 2.57E-04 |
| 17 | GO:0004180: carboxypeptidase activity | 2.57E-04 |
| 18 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 2.57E-04 |
| 19 | GO:0046524: sucrose-phosphate synthase activity | 2.57E-04 |
| 20 | GO:0003913: DNA photolyase activity | 2.57E-04 |
| 21 | GO:0004848: ureidoglycolate hydrolase activity | 2.57E-04 |
| 22 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.57E-04 |
| 23 | GO:0009882: blue light photoreceptor activity | 3.73E-04 |
| 24 | GO:0048027: mRNA 5'-UTR binding | 3.73E-04 |
| 25 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 3.73E-04 |
| 26 | GO:0016851: magnesium chelatase activity | 3.73E-04 |
| 27 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 4.99E-04 |
| 28 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 4.99E-04 |
| 29 | GO:0001053: plastid sigma factor activity | 4.99E-04 |
| 30 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 4.99E-04 |
| 31 | GO:0008453: alanine-glyoxylate transaminase activity | 4.99E-04 |
| 32 | GO:0016987: sigma factor activity | 4.99E-04 |
| 33 | GO:0016887: ATPase activity | 5.08E-04 |
| 34 | GO:0008237: metallopeptidase activity | 5.47E-04 |
| 35 | GO:0005275: amine transmembrane transporter activity | 6.32E-04 |
| 36 | GO:0008374: O-acyltransferase activity | 6.32E-04 |
| 37 | GO:0004556: alpha-amylase activity | 7.73E-04 |
| 38 | GO:0000293: ferric-chelate reductase activity | 7.73E-04 |
| 39 | GO:0050897: cobalt ion binding | 9.06E-04 |
| 40 | GO:0016157: sucrose synthase activity | 9.20E-04 |
| 41 | GO:0030246: carbohydrate binding | 9.73E-04 |
| 42 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.41E-03 |
| 43 | GO:0045309: protein phosphorylated amino acid binding | 1.77E-03 |
| 44 | GO:0019904: protein domain specific binding | 2.17E-03 |
| 45 | GO:0000155: phosphorelay sensor kinase activity | 2.58E-03 |
| 46 | GO:0004565: beta-galactosidase activity | 2.58E-03 |
| 47 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.04E-03 |
| 48 | GO:0001046: core promoter sequence-specific DNA binding | 3.49E-03 |
| 49 | GO:0004176: ATP-dependent peptidase activity | 3.98E-03 |
| 50 | GO:0003727: single-stranded RNA binding | 4.76E-03 |
| 51 | GO:0047134: protein-disulfide reductase activity | 5.03E-03 |
| 52 | GO:0008080: N-acetyltransferase activity | 5.59E-03 |
| 53 | GO:0004791: thioredoxin-disulfide reductase activity | 5.88E-03 |
| 54 | GO:0010181: FMN binding | 5.88E-03 |
| 55 | GO:0000287: magnesium ion binding | 6.15E-03 |
| 56 | GO:0048038: quinone binding | 6.46E-03 |
| 57 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.07E-03 |
| 58 | GO:0005524: ATP binding | 7.30E-03 |
| 59 | GO:0008483: transaminase activity | 7.70E-03 |
| 60 | GO:0008236: serine-type peptidase activity | 9.70E-03 |
| 61 | GO:0004222: metalloendopeptidase activity | 1.08E-02 |
| 62 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.11E-02 |
| 63 | GO:0008270: zinc ion binding | 1.43E-02 |
| 64 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.50E-02 |
| 65 | GO:0043621: protein self-association | 1.50E-02 |
| 66 | GO:0051287: NAD binding | 1.63E-02 |
| 67 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.75E-02 |
| 68 | GO:0003779: actin binding | 2.21E-02 |
| 69 | GO:0015035: protein disulfide oxidoreductase activity | 2.30E-02 |
| 70 | GO:0016829: lyase activity | 2.80E-02 |
| 71 | GO:0030170: pyridoxal phosphate binding | 2.85E-02 |
| 72 | GO:0042802: identical protein binding | 3.95E-02 |
| 73 | GO:0005506: iron ion binding | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.81E-15 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 4.54E-08 |
| 3 | GO:0031969: chloroplast membrane | 9.24E-06 |
| 4 | GO:0008290: F-actin capping protein complex | 1.52E-04 |
| 5 | GO:0042651: thylakoid membrane | 1.88E-04 |
| 6 | GO:0010007: magnesium chelatase complex | 2.57E-04 |
| 7 | GO:0009941: chloroplast envelope | 3.66E-04 |
| 8 | GO:0005759: mitochondrial matrix | 4.29E-04 |
| 9 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 4.99E-04 |
| 10 | GO:0009570: chloroplast stroma | 7.74E-04 |
| 11 | GO:0009534: chloroplast thylakoid | 8.30E-04 |
| 12 | GO:0042644: chloroplast nucleoid | 1.58E-03 |
| 13 | GO:0005773: vacuole | 1.80E-03 |
| 14 | GO:0005747: mitochondrial respiratory chain complex I | 2.04E-03 |
| 15 | GO:0009706: chloroplast inner membrane | 2.37E-03 |
| 16 | GO:0009505: plant-type cell wall | 2.53E-03 |
| 17 | GO:0005774: vacuolar membrane | 3.09E-03 |
| 18 | GO:0048046: apoplast | 3.36E-03 |
| 19 | GO:0045271: respiratory chain complex I | 3.74E-03 |
| 20 | GO:0009532: plastid stroma | 3.98E-03 |
| 21 | GO:0010319: stromule | 7.70E-03 |
| 22 | GO:0009295: nucleoid | 7.70E-03 |
| 23 | GO:0009707: chloroplast outer membrane | 1.01E-02 |
| 24 | GO:0031977: thylakoid lumen | 1.34E-02 |
| 25 | GO:0031966: mitochondrial membrane | 1.67E-02 |
| 26 | GO:0005777: peroxisome | 2.35E-02 |
| 27 | GO:0010287: plastoglobule | 2.55E-02 |
| 28 | GO:0005739: mitochondrion | 2.81E-02 |