co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
3	GO:0030155: regulation of cell adhesion	0.00E+00
4	GO:0090706: specification of plant organ position	0.00E+00
5	GO:0000025: maltose catabolic process	0.00E+00
6	GO:0005983: starch catabolic process	8.86E-06
7	GO:0005980: glycogen catabolic process	1.50E-04
8	GO:0010450: inflorescence meristem growth	1.50E-04
9	GO:0000023: maltose metabolic process	1.50E-04
10	GO:0048507: meristem development	1.63E-04
11	GO:0005976: polysaccharide metabolic process	3.42E-04
12	GO:0031648: protein destabilization	3.42E-04
13	GO:0006521: regulation of cellular amino acid metabolic process	3.42E-04
14	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.42E-04
15	GO:0009944: polarity specification of adaxial/abaxial axis	5.53E-04
16	GO:0006000: fructose metabolic process	5.61E-04
17	GO:0009405: pathogenesis	5.61E-04
18	GO:0045165: cell fate commitment	5.61E-04
19	GO:0048281: inflorescence morphogenesis	5.61E-04
20	GO:0003333: amino acid transmembrane transport	6.67E-04
21	GO:0061077: chaperone-mediated protein folding	6.67E-04
22	GO:0010148: transpiration	8.03E-04
23	GO:1901332: negative regulation of lateral root development	8.03E-04
24	GO:0010321: regulation of vegetative phase change	8.03E-04
25	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.03E-04
26	GO:0022622: root system development	1.06E-03
27	GO:0010600: regulation of auxin biosynthetic process	1.06E-03
28	GO:0006552: leucine catabolic process	1.06E-03
29	GO:0015846: polyamine transport	1.06E-03
30	GO:0006808: regulation of nitrogen utilization	1.06E-03
31	GO:0010023: proanthocyanidin biosynthetic process	1.06E-03
32	GO:0048497: maintenance of floral organ identity	1.35E-03
33	GO:1902183: regulation of shoot apical meristem development	1.35E-03
34	GO:0010158: abaxial cell fate specification	1.35E-03
35	GO:0009913: epidermal cell differentiation	1.65E-03
36	GO:1902456: regulation of stomatal opening	1.65E-03
37	GO:0003006: developmental process involved in reproduction	1.65E-03
38	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.98E-03
39	GO:0042026: protein refolding	1.98E-03
40	GO:0006458: 'de novo' protein folding	1.98E-03
41	GO:0045490: pectin catabolic process	2.10E-03
42	GO:0015995: chlorophyll biosynthetic process	2.21E-03
43	GO:0070370: cellular heat acclimation	2.33E-03
44	GO:0022904: respiratory electron transport chain	2.33E-03
45	GO:0010103: stomatal complex morphogenesis	2.33E-03
46	GO:0032880: regulation of protein localization	2.33E-03
47	GO:0010161: red light signaling pathway	2.33E-03
48	GO:0030497: fatty acid elongation	2.33E-03
49	GO:0010928: regulation of auxin mediated signaling pathway	2.70E-03
50	GO:0006353: DNA-templated transcription, termination	2.70E-03
51	GO:0009704: de-etiolation	2.70E-03
52	GO:0001558: regulation of cell growth	3.08E-03
53	GO:0010093: specification of floral organ identity	3.08E-03
54	GO:0006002: fructose 6-phosphate metabolic process	3.08E-03
55	GO:0051865: protein autoubiquitination	3.49E-03
56	GO:2000024: regulation of leaf development	3.49E-03
57	GO:0006783: heme biosynthetic process	3.49E-03
58	GO:0042761: very long-chain fatty acid biosynthetic process	3.91E-03
59	GO:0006782: protoporphyrinogen IX biosynthetic process	4.35E-03
60	GO:0009299: mRNA transcription	4.35E-03
61	GO:0048829: root cap development	4.35E-03
62	GO:0080167: response to karrikin	4.79E-03
63	GO:0009773: photosynthetic electron transport in photosystem I	4.80E-03
64	GO:0009750: response to fructose	4.80E-03
65	GO:0010015: root morphogenesis	4.80E-03
66	GO:0000038: very long-chain fatty acid metabolic process	4.80E-03
67	GO:0010582: floral meristem determinacy	5.27E-03
68	GO:0071365: cellular response to auxin stimulus	5.27E-03
69	GO:2000012: regulation of auxin polar transport	5.75E-03
70	GO:0006006: glucose metabolic process	5.75E-03
71	GO:0018107: peptidyl-threonine phosphorylation	5.75E-03
72	GO:0009718: anthocyanin-containing compound biosynthetic process	5.75E-03
73	GO:0009725: response to hormone	5.75E-03
74	GO:0006094: gluconeogenesis	5.75E-03
75	GO:0005986: sucrose biosynthetic process	5.75E-03
76	GO:0009933: meristem structural organization	6.25E-03
77	GO:0010207: photosystem II assembly	6.25E-03
78	GO:0009266: response to temperature stimulus	6.25E-03
79	GO:0006302: double-strand break repair	6.25E-03
80	GO:0048467: gynoecium development	6.25E-03
81	GO:0010030: positive regulation of seed germination	6.77E-03
82	GO:0009740: gibberellic acid mediated signaling pathway	7.17E-03
83	GO:0010025: wax biosynthetic process	7.30E-03
84	GO:0007017: microtubule-based process	8.40E-03
85	GO:0051302: regulation of cell division	8.40E-03
86	GO:0008152: metabolic process	8.90E-03
87	GO:0051321: meiotic cell cycle	8.97E-03
88	GO:0006355: regulation of transcription, DNA-templated	9.41E-03
89	GO:0010017: red or far-red light signaling pathway	9.56E-03
90	GO:0035428: hexose transmembrane transport	9.56E-03
91	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.56E-03
92	GO:0019748: secondary metabolic process	9.56E-03
93	GO:0030245: cellulose catabolic process	9.56E-03
94	GO:0009686: gibberellin biosynthetic process	1.02E-02
95	GO:0001944: vasculature development	1.02E-02
96	GO:0008284: positive regulation of cell proliferation	1.14E-02
97	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.14E-02
98	GO:0006633: fatty acid biosynthetic process	1.20E-02
99	GO:0042631: cellular response to water deprivation	1.20E-02
100	GO:0010154: fruit development	1.27E-02
101	GO:0010305: leaf vascular tissue pattern formation	1.27E-02
102	GO:0009958: positive gravitropism	1.27E-02
103	GO:0046323: glucose import	1.27E-02
104	GO:0009646: response to absence of light	1.34E-02
105	GO:0048825: cotyledon development	1.41E-02
106	GO:0009735: response to cytokinin	1.46E-02
107	GO:0032502: developmental process	1.55E-02
108	GO:0071281: cellular response to iron ion	1.62E-02
109	GO:1901657: glycosyl compound metabolic process	1.62E-02
110	GO:0009607: response to biotic stimulus	1.99E-02
111	GO:0009627: systemic acquired resistance	2.07E-02
112	GO:0048573: photoperiodism, flowering	2.15E-02
113	GO:0016311: dephosphorylation	2.23E-02
114	GO:0009723: response to ethylene	2.37E-02
115	GO:0009631: cold acclimation	2.56E-02
116	GO:0048527: lateral root development	2.56E-02
117	GO:0009910: negative regulation of flower development	2.56E-02
118	GO:0006865: amino acid transport	2.65E-02
119	GO:0015979: photosynthesis	2.90E-02
120	GO:0007165: signal transduction	3.25E-02
121	GO:0009640: photomorphogenesis	3.28E-02
122	GO:0006869: lipid transport	3.33E-02
123	GO:0009737: response to abscisic acid	3.35E-02
124	GO:0009644: response to high light intensity	3.47E-02
125	GO:0009965: leaf morphogenesis	3.56E-02
126	GO:0032259: methylation	3.58E-02
127	GO:0006351: transcription, DNA-templated	3.62E-02
128	GO:0009751: response to salicylic acid	3.69E-02
129	GO:0009414: response to water deprivation	3.82E-02
130	GO:0009664: plant-type cell wall organization	3.85E-02
131	GO:0009585: red, far-red light phototransduction	4.05E-02
132	GO:0009909: regulation of flower development	4.36E-02
133	GO:0009873: ethylene-activated signaling pathway	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
2	GO:0004134: 4-alpha-glucanotransferase activity	0.00E+00
3	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
4	GO:0048039: ubiquinone binding	0.00E+00
5	GO:0009899: ent-kaurene synthase activity	0.00E+00
6	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
7	GO:0030570: pectate lyase activity	4.39E-05
8	GO:0004853: uroporphyrinogen decarboxylase activity	1.50E-04
9	GO:0004645: phosphorylase activity	1.50E-04
10	GO:0008184: glycogen phosphorylase activity	1.50E-04
11	GO:0044183: protein binding involved in protein folding	2.70E-04
12	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	3.42E-04
13	GO:0018708: thiol S-methyltransferase activity	3.42E-04
14	GO:0016868: intramolecular transferase activity, phosphotransferases	3.42E-04
15	GO:0010297: heteropolysaccharide binding	3.42E-04
16	GO:0043425: bHLH transcription factor binding	3.42E-04
17	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.42E-04
18	GO:0017150: tRNA dihydrouridine synthase activity	5.61E-04
19	GO:0090729: toxin activity	5.61E-04
20	GO:0016805: dipeptidase activity	5.61E-04
21	GO:0004180: carboxypeptidase activity	5.61E-04
22	GO:0015203: polyamine transmembrane transporter activity	8.03E-04
23	GO:0016851: magnesium chelatase activity	8.03E-04
24	GO:0010328: auxin influx transmembrane transporter activity	1.06E-03
25	GO:0019199: transmembrane receptor protein kinase activity	1.06E-03
26	GO:0042277: peptide binding	1.06E-03
27	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.06E-03
28	GO:0048038: quinone binding	1.31E-03
29	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.35E-03
30	GO:2001070: starch binding	1.65E-03
31	GO:0005337: nucleoside transmembrane transporter activity	2.70E-03
32	GO:0015174: basic amino acid transmembrane transporter activity	3.91E-03
33	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.12E-03
34	GO:0043621: protein self-association	4.30E-03
35	GO:0051537: 2 iron, 2 sulfur cluster binding	4.30E-03
36	GO:0015020: glucuronosyltransferase activity	4.35E-03
37	GO:0015293: symporter activity	4.47E-03
38	GO:0046872: metal ion binding	4.99E-03
39	GO:0004565: beta-galactosidase activity	5.75E-03
40	GO:0043565: sequence-specific DNA binding	6.23E-03
41	GO:0008083: growth factor activity	6.25E-03
42	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	6.53E-03
43	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	7.30E-03
44	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	7.30E-03
45	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	7.30E-03
46	GO:0009055: electron carrier activity	8.60E-03
47	GO:0008408: 3'-5' exonuclease activity	8.97E-03
48	GO:0008810: cellulase activity	1.02E-02
49	GO:0022891: substrate-specific transmembrane transporter activity	1.02E-02
50	GO:0016829: lyase activity	1.03E-02
51	GO:0008289: lipid binding	1.20E-02
52	GO:0005355: glucose transmembrane transporter activity	1.34E-02
53	GO:0005200: structural constituent of cytoskeleton	1.76E-02
54	GO:0016597: amino acid binding	1.84E-02
55	GO:0008168: methyltransferase activity	1.97E-02
56	GO:0102483: scopolin beta-glucosidase activity	2.15E-02
57	GO:0030145: manganese ion binding	2.56E-02
58	GO:0003677: DNA binding	2.74E-02
59	GO:0008422: beta-glucosidase activity	2.91E-02
60	GO:0051539: 4 iron, 4 sulfur cluster binding	3.00E-02
61	GO:0004185: serine-type carboxypeptidase activity	3.28E-02
62	GO:0044212: transcription regulatory region DNA binding	3.93E-02
63	GO:0015171: amino acid transmembrane transporter activity	4.36E-02
64	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.88E-02
65	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.92E-06
3	GO:0009570: chloroplast stroma	1.37E-04
4	GO:0000791: euchromatin	1.50E-04
5	GO:0009507: chloroplast	1.85E-04
6	GO:0030870: Mre11 complex	3.42E-04
7	GO:0010007: magnesium chelatase complex	5.61E-04
8	GO:0000795: synaptonemal complex	1.35E-03
9	GO:0031305: integral component of mitochondrial inner membrane	2.70E-03
10	GO:0009501: amyloplast	2.70E-03
11	GO:0045298: tubulin complex	3.49E-03
12	GO:0005740: mitochondrial envelope	4.35E-03
13	GO:0009535: chloroplast thylakoid membrane	1.16E-02
14	GO:0009505: plant-type cell wall	1.53E-02
15	GO:0000785: chromatin	1.55E-02
16	GO:0009295: nucleoid	1.76E-02
17	GO:0005576: extracellular region	2.02E-02
18	GO:0009534: chloroplast thylakoid	2.07E-02
19	GO:0005874: microtubule	2.45E-02
20	GO:0031977: thylakoid lumen	3.09E-02
21	GO:0005834: heterotrimeric G-protein complex	4.78E-02