GO Enrichment Analysis of Co-expressed Genes with
AT5G48760
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 3 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 4 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 5 | GO:0006412: translation | 8.14E-156 |
| 6 | GO:0042254: ribosome biogenesis | 3.93E-59 |
| 7 | GO:0000027: ribosomal large subunit assembly | 4.38E-15 |
| 8 | GO:0006626: protein targeting to mitochondrion | 4.50E-08 |
| 9 | GO:1902626: assembly of large subunit precursor of preribosome | 5.06E-08 |
| 10 | GO:0000028: ribosomal small subunit assembly | 1.59E-07 |
| 11 | GO:0009955: adaxial/abaxial pattern specification | 5.29E-06 |
| 12 | GO:0006364: rRNA processing | 6.12E-06 |
| 13 | GO:0002181: cytoplasmic translation | 2.08E-05 |
| 14 | GO:0042256: mature ribosome assembly | 2.08E-05 |
| 15 | GO:0000387: spliceosomal snRNP assembly | 3.33E-05 |
| 16 | GO:0010162: seed dormancy process | 4.32E-05 |
| 17 | GO:0009735: response to cytokinin | 1.21E-04 |
| 18 | GO:0031167: rRNA methylation | 1.27E-04 |
| 19 | GO:0030150: protein import into mitochondrial matrix | 1.64E-04 |
| 20 | GO:0000470: maturation of LSU-rRNA | 1.82E-04 |
| 21 | GO:0000398: mRNA splicing, via spliceosome | 2.11E-04 |
| 22 | GO:0006407: rRNA export from nucleus | 3.63E-04 |
| 23 | GO:0031120: snRNA pseudouridine synthesis | 3.63E-04 |
| 24 | GO:0031118: rRNA pseudouridine synthesis | 3.63E-04 |
| 25 | GO:0015801: aromatic amino acid transport | 3.63E-04 |
| 26 | GO:0030490: maturation of SSU-rRNA | 3.63E-04 |
| 27 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.63E-04 |
| 28 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.63E-04 |
| 29 | GO:0010197: polar nucleus fusion | 4.23E-04 |
| 30 | GO:0001510: RNA methylation | 4.91E-04 |
| 31 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 7.89E-04 |
| 32 | GO:0048569: post-embryonic animal organ development | 7.89E-04 |
| 33 | GO:0009967: positive regulation of signal transduction | 7.89E-04 |
| 34 | GO:0007004: telomere maintenance via telomerase | 1.84E-03 |
| 35 | GO:0070301: cellular response to hydrogen peroxide | 1.84E-03 |
| 36 | GO:0006241: CTP biosynthetic process | 1.84E-03 |
| 37 | GO:0006165: nucleoside diphosphate phosphorylation | 1.84E-03 |
| 38 | GO:0006228: UTP biosynthetic process | 1.84E-03 |
| 39 | GO:0006164: purine nucleotide biosynthetic process | 1.84E-03 |
| 40 | GO:0009855: determination of bilateral symmetry | 1.84E-03 |
| 41 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.87E-03 |
| 42 | GO:0008283: cell proliferation | 2.30E-03 |
| 43 | GO:0000460: maturation of 5.8S rRNA | 2.47E-03 |
| 44 | GO:0042274: ribosomal small subunit biogenesis | 2.47E-03 |
| 45 | GO:0006183: GTP biosynthetic process | 2.47E-03 |
| 46 | GO:0042273: ribosomal large subunit biogenesis | 2.47E-03 |
| 47 | GO:0009294: DNA mediated transformation | 2.71E-03 |
| 48 | GO:0071215: cellular response to abscisic acid stimulus | 2.71E-03 |
| 49 | GO:0008033: tRNA processing | 3.46E-03 |
| 50 | GO:0045040: protein import into mitochondrial outer membrane | 3.91E-03 |
| 51 | GO:0016070: RNA metabolic process | 3.91E-03 |
| 52 | GO:0000741: karyogamy | 3.91E-03 |
| 53 | GO:0080156: mitochondrial mRNA modification | 4.60E-03 |
| 54 | GO:0000245: spliceosomal complex assembly | 4.71E-03 |
| 55 | GO:0016444: somatic cell DNA recombination | 4.71E-03 |
| 56 | GO:0000054: ribosomal subunit export from nucleus | 4.71E-03 |
| 57 | GO:0080186: developmental vegetative growth | 5.56E-03 |
| 58 | GO:0001522: pseudouridine synthesis | 6.46E-03 |
| 59 | GO:0035265: organ growth | 6.46E-03 |
| 60 | GO:0001558: regulation of cell growth | 7.41E-03 |
| 61 | GO:0006526: arginine biosynthetic process | 7.41E-03 |
| 62 | GO:0006189: 'de novo' IMP biosynthetic process | 8.41E-03 |
| 63 | GO:0007338: single fertilization | 8.41E-03 |
| 64 | GO:0048507: meristem development | 8.41E-03 |
| 65 | GO:0006413: translational initiation | 9.71E-03 |
| 66 | GO:0030422: production of siRNA involved in RNA interference | 1.05E-02 |
| 67 | GO:0010015: root morphogenesis | 1.17E-02 |
| 68 | GO:0006913: nucleocytoplasmic transport | 1.17E-02 |
| 69 | GO:0006820: anion transport | 1.29E-02 |
| 70 | GO:0010102: lateral root morphogenesis | 1.41E-02 |
| 71 | GO:0006446: regulation of translational initiation | 1.53E-02 |
| 72 | GO:0048467: gynoecium development | 1.53E-02 |
| 73 | GO:0009965: leaf morphogenesis | 1.61E-02 |
| 74 | GO:0009793: embryo development ending in seed dormancy | 1.80E-02 |
| 75 | GO:0051302: regulation of cell division | 2.07E-02 |
| 76 | GO:0003333: amino acid transmembrane transport | 2.22E-02 |
| 77 | GO:0006334: nucleosome assembly | 2.22E-02 |
| 78 | GO:0007005: mitochondrion organization | 2.37E-02 |
| 79 | GO:0040007: growth | 2.52E-02 |
| 80 | GO:0016569: covalent chromatin modification | 2.59E-02 |
| 81 | GO:0042127: regulation of cell proliferation | 2.67E-02 |
| 82 | GO:0009553: embryo sac development | 2.67E-02 |
| 83 | GO:0000413: protein peptidyl-prolyl isomerization | 2.99E-02 |
| 84 | GO:0009960: endosperm development | 3.16E-02 |
| 85 | GO:0006635: fatty acid beta-oxidation | 3.67E-02 |
| 86 | GO:0032502: developmental process | 3.84E-02 |
| 87 | GO:0015031: protein transport | 3.90E-02 |
| 88 | GO:0009567: double fertilization forming a zygote and endosperm | 4.20E-02 |
| 89 | GO:0009409: response to cold | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004055: argininosuccinate synthase activity | 0.00E+00 |
| 2 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 3 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 4 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 5 | GO:0003735: structural constituent of ribosome | 1.27E-187 |
| 6 | GO:0003729: mRNA binding | 8.06E-33 |
| 7 | GO:0019843: rRNA binding | 7.51E-16 |
| 8 | GO:0003723: RNA binding | 4.95E-11 |
| 9 | GO:0030515: snoRNA binding | 8.81E-08 |
| 10 | GO:0008649: rRNA methyltransferase activity | 2.08E-05 |
| 11 | GO:0001055: RNA polymerase II activity | 3.33E-05 |
| 12 | GO:0008097: 5S rRNA binding | 4.58E-05 |
| 13 | GO:0001054: RNA polymerase I activity | 5.49E-05 |
| 14 | GO:0001056: RNA polymerase III activity | 6.82E-05 |
| 15 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.56E-04 |
| 16 | GO:0004407: histone deacetylase activity | 1.64E-04 |
| 17 | GO:0048037: cofactor binding | 3.63E-04 |
| 18 | GO:0043022: ribosome binding | 4.01E-04 |
| 19 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 7.89E-04 |
| 20 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 7.89E-04 |
| 21 | GO:0015173: aromatic amino acid transmembrane transporter activity | 7.89E-04 |
| 22 | GO:0070034: telomerase RNA binding | 7.89E-04 |
| 23 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 7.89E-04 |
| 24 | GO:0005078: MAP-kinase scaffold activity | 7.89E-04 |
| 25 | GO:0015266: protein channel activity | 1.20E-03 |
| 26 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 1.28E-03 |
| 27 | GO:0004550: nucleoside diphosphate kinase activity | 1.84E-03 |
| 28 | GO:0043023: ribosomal large subunit binding | 1.84E-03 |
| 29 | GO:0005275: amine transmembrane transporter activity | 3.16E-03 |
| 30 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.37E-03 |
| 31 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 3.91E-03 |
| 32 | GO:0008235: metalloexopeptidase activity | 5.56E-03 |
| 33 | GO:0015288: porin activity | 6.46E-03 |
| 34 | GO:0008308: voltage-gated anion channel activity | 7.41E-03 |
| 35 | GO:0044183: protein binding involved in protein folding | 1.17E-02 |
| 36 | GO:0000049: tRNA binding | 1.29E-02 |
| 37 | GO:0000175: 3'-5'-exoribonuclease activity | 1.41E-02 |
| 38 | GO:0051087: chaperone binding | 2.07E-02 |
| 39 | GO:0000166: nucleotide binding | 2.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 3 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 4 | GO:0005840: ribosome | 8.78E-129 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 2.98E-114 |
| 6 | GO:0022626: cytosolic ribosome | 5.58E-105 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 3.12E-82 |
| 8 | GO:0005730: nucleolus | 5.04E-50 |
| 9 | GO:0005737: cytoplasm | 4.24E-34 |
| 10 | GO:0005829: cytosol | 1.75E-33 |
| 11 | GO:0009506: plasmodesma | 1.87E-25 |
| 12 | GO:0015934: large ribosomal subunit | 1.47E-14 |
| 13 | GO:0016020: membrane | 5.85E-13 |
| 14 | GO:0015935: small ribosomal subunit | 1.21E-12 |
| 15 | GO:0005774: vacuolar membrane | 4.32E-12 |
| 16 | GO:0005773: vacuole | 1.65E-09 |
| 17 | GO:0005618: cell wall | 3.20E-08 |
| 18 | GO:0015030: Cajal body | 6.53E-07 |
| 19 | GO:0031428: box C/D snoRNP complex | 3.06E-06 |
| 20 | GO:0005742: mitochondrial outer membrane translocase complex | 1.82E-05 |
| 21 | GO:0034719: SMN-Sm protein complex | 2.08E-05 |
| 22 | GO:0009507: chloroplast | 2.23E-05 |
| 23 | GO:0005736: DNA-directed RNA polymerase I complex | 2.50E-05 |
| 24 | GO:0005666: DNA-directed RNA polymerase III complex | 3.33E-05 |
| 25 | GO:0000418: DNA-directed RNA polymerase IV complex | 4.32E-05 |
| 26 | GO:0032040: small-subunit processome | 6.82E-05 |
| 27 | GO:0005665: DNA-directed RNA polymerase II, core complex | 6.82E-05 |
| 28 | GO:0005682: U5 snRNP | 8.11E-05 |
| 29 | GO:0019013: viral nucleocapsid | 8.34E-05 |
| 30 | GO:0005687: U4 snRNP | 1.27E-04 |
| 31 | GO:0097526: spliceosomal tri-snRNP complex | 1.27E-04 |
| 32 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.89E-04 |
| 33 | GO:0005689: U12-type spliceosomal complex | 2.46E-04 |
| 34 | GO:0030686: 90S preribosome | 3.63E-04 |
| 35 | GO:0005685: U1 snRNP | 5.89E-04 |
| 36 | GO:0071011: precatalytic spliceosome | 6.94E-04 |
| 37 | GO:0005681: spliceosomal complex | 7.37E-04 |
| 38 | GO:0071010: prespliceosome | 7.89E-04 |
| 39 | GO:0005686: U2 snRNP | 8.10E-04 |
| 40 | GO:0071013: catalytic step 2 spliceosome | 9.32E-04 |
| 41 | GO:0005886: plasma membrane | 1.25E-03 |
| 42 | GO:0034715: pICln-Sm protein complex | 1.28E-03 |
| 43 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.28E-03 |
| 44 | GO:0000419: DNA-directed RNA polymerase V complex | 1.69E-03 |
| 45 | GO:0031429: box H/ACA snoRNP complex | 1.84E-03 |
| 46 | GO:0005758: mitochondrial intermembrane space | 1.87E-03 |
| 47 | GO:0000243: commitment complex | 3.91E-03 |
| 48 | GO:0016272: prefoldin complex | 4.71E-03 |
| 49 | GO:0030687: preribosome, large subunit precursor | 5.56E-03 |
| 50 | GO:0071004: U2-type prespliceosome | 6.46E-03 |
| 51 | GO:0005688: U6 snRNP | 6.46E-03 |
| 52 | GO:0030529: intracellular ribonucleoprotein complex | 6.65E-03 |
| 53 | GO:0046930: pore complex | 7.41E-03 |
| 54 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 7.41E-03 |
| 55 | GO:0016604: nuclear body | 9.46E-03 |
| 56 | GO:0005743: mitochondrial inner membrane | 9.79E-03 |
| 57 | GO:0048471: perinuclear region of cytoplasm | 1.17E-02 |
| 58 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.17E-02 |
| 59 | GO:0031307: integral component of mitochondrial outer membrane | 1.29E-02 |
| 60 | GO:0005741: mitochondrial outer membrane | 2.22E-02 |
| 61 | GO:0005834: heterotrimeric G-protein complex | 2.43E-02 |
| 62 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 2.67E-02 |
| 63 | GO:0016592: mediator complex | 3.84E-02 |