co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48560

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035264: multicellular organism growth	0.00E+00
2	GO:0071289: cellular response to nickel ion	0.00E+00
3	GO:0034263: positive regulation of autophagy in response to ER overload	0.00E+00
4	GO:0042353: fucose biosynthetic process	0.00E+00
5	GO:0032497: detection of lipopolysaccharide	0.00E+00
6	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
7	GO:0010046: response to mycotoxin	0.00E+00
8	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
9	GO:0010200: response to chitin	2.23E-09
10	GO:0006468: protein phosphorylation	3.52E-09
11	GO:0007166: cell surface receptor signaling pathway	1.69E-05
12	GO:0002679: respiratory burst involved in defense response	2.00E-05
13	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.19E-04
14	GO:0048544: recognition of pollen	1.88E-04
15	GO:2000070: regulation of response to water deprivation	2.00E-04
16	GO:0045010: actin nucleation	2.00E-04
17	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	2.27E-04
18	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.27E-04
19	GO:0051180: vitamin transport	2.27E-04
20	GO:0030974: thiamine pyrophosphate transport	2.27E-04
21	GO:0080157: regulation of plant-type cell wall organization or biogenesis	2.27E-04
22	GO:0050691: regulation of defense response to virus by host	2.27E-04
23	GO:0010193: response to ozone	2.28E-04
24	GO:0051865: protein autoubiquitination	3.00E-04
25	GO:0006904: vesicle docking involved in exocytosis	3.21E-04
26	GO:2000280: regulation of root development	3.56E-04
27	GO:0046740: transport of virus in host, cell to cell	5.05E-04
28	GO:0046939: nucleotide phosphorylation	5.05E-04
29	GO:0042754: negative regulation of circadian rhythm	5.05E-04
30	GO:0010289: homogalacturonan biosynthetic process	5.05E-04
31	GO:0010372: positive regulation of gibberellin biosynthetic process	5.05E-04
32	GO:2000030: regulation of response to red or far red light	5.05E-04
33	GO:0015893: drug transport	5.05E-04
34	GO:0002221: pattern recognition receptor signaling pathway	5.05E-04
35	GO:0006952: defense response	5.76E-04
36	GO:0009611: response to wounding	6.01E-04
37	GO:0042742: defense response to bacterium	6.54E-04
38	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	8.21E-04
39	GO:0080168: abscisic acid transport	8.21E-04
40	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	8.21E-04
41	GO:0051176: positive regulation of sulfur metabolic process	8.21E-04
42	GO:0006887: exocytosis	8.83E-04
43	GO:0009863: salicylic acid mediated signaling pathway	9.67E-04
44	GO:0009737: response to abscisic acid	1.10E-03
45	GO:0010071: root meristem specification	1.17E-03
46	GO:0034219: carbohydrate transmembrane transport	1.17E-03
47	GO:0030100: regulation of endocytosis	1.17E-03
48	GO:0033014: tetrapyrrole biosynthetic process	1.17E-03
49	GO:0015696: ammonium transport	1.17E-03
50	GO:0006986: response to unfolded protein	1.17E-03
51	GO:0046345: abscisic acid catabolic process	1.56E-03
52	GO:0009652: thigmotropism	1.56E-03
53	GO:0072488: ammonium transmembrane transport	1.56E-03
54	GO:0006536: glutamate metabolic process	1.56E-03
55	GO:0034440: lipid oxidation	1.56E-03
56	GO:1902347: response to strigolactone	1.56E-03
57	GO:0080142: regulation of salicylic acid biosynthetic process	1.56E-03
58	GO:0009694: jasmonic acid metabolic process	1.56E-03
59	GO:0009435: NAD biosynthetic process	1.99E-03
60	GO:0009823: cytokinin catabolic process	1.99E-03
61	GO:0030041: actin filament polymerization	1.99E-03
62	GO:0010117: photoprotection	1.99E-03
63	GO:0045038: protein import into chloroplast thylakoid membrane	1.99E-03
64	GO:0002229: defense response to oomycetes	2.33E-03
65	GO:0009742: brassinosteroid mediated signaling pathway	2.38E-03
66	GO:0006751: glutathione catabolic process	2.45E-03
67	GO:0010256: endomembrane system organization	2.45E-03
68	GO:0048317: seed morphogenesis	2.45E-03
69	GO:0010337: regulation of salicylic acid metabolic process	2.45E-03
70	GO:0010942: positive regulation of cell death	2.45E-03
71	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.94E-03
72	GO:0010555: response to mannitol	2.94E-03
73	GO:0080086: stamen filament development	2.94E-03
74	GO:2000067: regulation of root morphogenesis	2.94E-03
75	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.47E-03
76	GO:0006955: immune response	3.47E-03
77	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.47E-03
78	GO:0009816: defense response to bacterium, incompatible interaction	3.55E-03
79	GO:0010492: maintenance of shoot apical meristem identity	4.02E-03
80	GO:0007155: cell adhesion	4.02E-03
81	GO:0006402: mRNA catabolic process	4.02E-03
82	GO:1900150: regulation of defense response to fungus	4.02E-03
83	GO:0009690: cytokinin metabolic process	4.02E-03
84	GO:0010078: maintenance of root meristem identity	4.02E-03
85	GO:0048658: anther wall tapetum development	4.02E-03
86	GO:0008219: cell death	4.38E-03
87	GO:0009699: phenylpropanoid biosynthetic process	4.60E-03
88	GO:0009932: cell tip growth	4.60E-03
89	GO:0007186: G-protein coupled receptor signaling pathway	4.60E-03
90	GO:0030968: endoplasmic reticulum unfolded protein response	4.60E-03
91	GO:0016310: phosphorylation	4.64E-03
92	GO:0009060: aerobic respiration	5.22E-03
93	GO:0098656: anion transmembrane transport	5.22E-03
94	GO:0046685: response to arsenic-containing substance	5.22E-03
95	GO:0006783: heme biosynthetic process	5.22E-03
96	GO:0009617: response to bacterium	5.54E-03
97	GO:0006779: porphyrin-containing compound biosynthetic process	5.85E-03
98	GO:0006782: protoporphyrinogen IX biosynthetic process	6.51E-03
99	GO:0019538: protein metabolic process	6.51E-03
100	GO:0007064: mitotic sister chromatid cohesion	6.51E-03
101	GO:0051707: response to other organism	7.14E-03
102	GO:0010015: root morphogenesis	7.20E-03
103	GO:0009750: response to fructose	7.20E-03
104	GO:0071365: cellular response to auxin stimulus	7.92E-03
105	GO:0010105: negative regulation of ethylene-activated signaling pathway	7.92E-03
106	GO:0006979: response to oxidative stress	8.12E-03
107	GO:0055046: microgametogenesis	8.66E-03
108	GO:0031347: regulation of defense response	8.66E-03
109	GO:0009651: response to salt stress	9.08E-03
110	GO:0034605: cellular response to heat	9.42E-03
111	GO:0002237: response to molecule of bacterial origin	9.42E-03
112	GO:0010224: response to UV-B	9.98E-03
113	GO:0080167: response to karrikin	1.01E-02
114	GO:0009969: xyloglucan biosynthetic process	1.02E-02
115	GO:0009901: anther dehiscence	1.02E-02
116	GO:0070588: calcium ion transmembrane transport	1.02E-02
117	GO:0046777: protein autophosphorylation	1.11E-02
118	GO:2000377: regulation of reactive oxygen species metabolic process	1.19E-02
119	GO:0009695: jasmonic acid biosynthetic process	1.27E-02
120	GO:0061077: chaperone-mediated protein folding	1.36E-02
121	GO:0031408: oxylipin biosynthetic process	1.36E-02
122	GO:0016998: cell wall macromolecule catabolic process	1.36E-02
123	GO:0009624: response to nematode	1.38E-02
124	GO:0031348: negative regulation of defense response	1.45E-02
125	GO:0016226: iron-sulfur cluster assembly	1.45E-02
126	GO:0035428: hexose transmembrane transport	1.45E-02
127	GO:0030433: ubiquitin-dependent ERAD pathway	1.45E-02
128	GO:0071215: cellular response to abscisic acid stimulus	1.54E-02
129	GO:0009686: gibberellin biosynthetic process	1.54E-02
130	GO:0040007: growth	1.54E-02
131	GO:0010089: xylem development	1.64E-02
132	GO:0010091: trichome branching	1.64E-02
133	GO:0009306: protein secretion	1.64E-02
134	GO:0009408: response to heat	1.66E-02
135	GO:0046686: response to cadmium ion	1.72E-02
136	GO:0006397: mRNA processing	1.76E-02
137	GO:0048364: root development	1.76E-02
138	GO:0048653: anther development	1.83E-02
139	GO:0042631: cellular response to water deprivation	1.83E-02
140	GO:0080022: primary root development	1.83E-02
141	GO:0046323: glucose import	1.93E-02
142	GO:0009960: endosperm development	1.93E-02
143	GO:0009749: response to glucose	2.14E-02
144	GO:0009873: ethylene-activated signaling pathway	2.30E-02
145	GO:0009630: gravitropism	2.35E-02
146	GO:0031047: gene silencing by RNA	2.35E-02
147	GO:0007623: circadian rhythm	2.38E-02
148	GO:1901657: glycosyl compound metabolic process	2.46E-02
149	GO:0010090: trichome morphogenesis	2.46E-02
150	GO:0009414: response to water deprivation	2.55E-02
151	GO:0006914: autophagy	2.57E-02
152	GO:0010468: regulation of gene expression	2.85E-02
153	GO:0009615: response to virus	2.91E-02
154	GO:0001666: response to hypoxia	2.91E-02
155	GO:0009627: systemic acquired resistance	3.15E-02
156	GO:0015995: chlorophyll biosynthetic process	3.27E-02
157	GO:0048573: photoperiodism, flowering	3.27E-02
158	GO:0016049: cell growth	3.40E-02
159	GO:0009555: pollen development	3.41E-02
160	GO:0009813: flavonoid biosynthetic process	3.65E-02
161	GO:0035556: intracellular signal transduction	3.65E-02
162	GO:0006499: N-terminal protein myristoylation	3.77E-02
163	GO:0010119: regulation of stomatal movement	3.90E-02
164	GO:0006970: response to osmotic stress	3.96E-02
165	GO:0009409: response to cold	4.10E-02
166	GO:0045087: innate immune response	4.17E-02
167	GO:0009723: response to ethylene	4.26E-02
168	GO:0006839: mitochondrial transport	4.57E-02
169	GO:0006457: protein folding	4.68E-02
170	GO:0006897: endocytosis	4.71E-02
171	GO:0009744: response to sucrose	4.98E-02
172	GO:0009640: photomorphogenesis	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
2	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
3	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
4	GO:0070566: adenylyltransferase activity	0.00E+00
5	GO:0008987: quinolinate synthetase A activity	0.00E+00
6	GO:0005522: profilin binding	0.00E+00
7	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
8	GO:0016301: kinase activity	1.34E-08
9	GO:0005524: ATP binding	2.22E-06
10	GO:0004674: protein serine/threonine kinase activity	6.96E-06
11	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.04E-04
12	GO:0004672: protein kinase activity	1.13E-04
13	GO:0090422: thiamine pyrophosphate transporter activity	2.27E-04
14	GO:0015085: calcium ion transmembrane transporter activity	2.27E-04
15	GO:0030544: Hsp70 protein binding	2.27E-04
16	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.27E-04
17	GO:0090440: abscisic acid transporter activity	2.27E-04
18	GO:0001047: core promoter binding	5.05E-04
19	GO:0004103: choline kinase activity	5.05E-04
20	GO:0008883: glutamyl-tRNA reductase activity	5.05E-04
21	GO:0019888: protein phosphatase regulator activity	6.27E-04
22	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	6.34E-04
23	GO:0001664: G-protein coupled receptor binding	8.21E-04
24	GO:0031683: G-protein beta/gamma-subunit complex binding	8.21E-04
25	GO:0003840: gamma-glutamyltransferase activity	8.21E-04
26	GO:0036374: glutathione hydrolase activity	8.21E-04
27	GO:0016165: linoleate 13S-lipoxygenase activity	8.21E-04
28	GO:0004351: glutamate decarboxylase activity	1.17E-03
29	GO:0019201: nucleotide kinase activity	1.17E-03
30	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.17E-03
31	GO:0035251: UDP-glucosyltransferase activity	1.17E-03
32	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.17E-03
33	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.97E-03
34	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.97E-03
35	GO:0002020: protease binding	1.99E-03
36	GO:0045431: flavonol synthase activity	1.99E-03
37	GO:0010294: abscisic acid glucosyltransferase activity	1.99E-03
38	GO:0009922: fatty acid elongase activity	1.99E-03
39	GO:0019139: cytokinin dehydrogenase activity	1.99E-03
40	GO:0047631: ADP-ribose diphosphatase activity	1.99E-03
41	GO:0003779: actin binding	2.13E-03
42	GO:0008519: ammonium transmembrane transporter activity	2.45E-03
43	GO:0035673: oligopeptide transmembrane transporter activity	2.45E-03
44	GO:0051020: GTPase binding	2.94E-03
45	GO:0004017: adenylate kinase activity	2.94E-03
46	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.94E-03
47	GO:0004143: diacylglycerol kinase activity	3.47E-03
48	GO:0102425: myricetin 3-O-glucosyltransferase activity	3.47E-03
49	GO:0102360: daphnetin 3-O-glucosyltransferase activity	3.47E-03
50	GO:0016621: cinnamoyl-CoA reductase activity	3.47E-03
51	GO:0019899: enzyme binding	3.47E-03
52	GO:0008143: poly(A) binding	3.47E-03
53	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.02E-03
54	GO:0047893: flavonol 3-O-glucosyltransferase activity	4.02E-03
55	GO:0003951: NAD+ kinase activity	4.60E-03
56	GO:0005516: calmodulin binding	4.77E-03
57	GO:0008194: UDP-glycosyltransferase activity	5.10E-03
58	GO:0008047: enzyme activator activity	6.51E-03
59	GO:0004713: protein tyrosine kinase activity	6.51E-03
60	GO:0015198: oligopeptide transporter activity	7.92E-03
61	GO:0004521: endoribonuclease activity	7.92E-03
62	GO:0005388: calcium-transporting ATPase activity	8.66E-03
63	GO:0005315: inorganic phosphate transmembrane transporter activity	8.66E-03
64	GO:0050660: flavin adenine dinucleotide binding	9.28E-03
65	GO:0008131: primary amine oxidase activity	9.42E-03
66	GO:0051119: sugar transmembrane transporter activity	1.02E-02
67	GO:0031625: ubiquitin protein ligase binding	1.07E-02
68	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.10E-02
69	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.10E-02
70	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.10E-02
71	GO:0051087: chaperone binding	1.27E-02
72	GO:0004540: ribonuclease activity	1.36E-02
73	GO:0033612: receptor serine/threonine kinase binding	1.36E-02
74	GO:0030246: carbohydrate binding	1.44E-02
75	GO:0008514: organic anion transmembrane transporter activity	1.64E-02
76	GO:0016758: transferase activity, transferring hexosyl groups	1.68E-02
77	GO:0009055: electron carrier activity	1.82E-02
78	GO:0005355: glucose transmembrane transporter activity	2.03E-02
79	GO:0050662: coenzyme binding	2.03E-02
80	GO:0015144: carbohydrate transmembrane transporter activity	2.07E-02
81	GO:0043565: sequence-specific DNA binding	2.20E-02
82	GO:0005351: sugar:proton symporter activity	2.33E-02
83	GO:0005509: calcium ion binding	2.34E-02
84	GO:0004518: nuclease activity	2.35E-02
85	GO:0051015: actin filament binding	2.46E-02
86	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.15E-02
87	GO:0004683: calmodulin-dependent protein kinase activity	3.27E-02
88	GO:0102483: scopolin beta-glucosidase activity	3.27E-02
89	GO:0030247: polysaccharide binding	3.27E-02
90	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.40E-02
91	GO:0046982: protein heterodimerization activity	3.62E-02
92	GO:0015238: drug transmembrane transporter activity	3.65E-02
93	GO:0003682: chromatin binding	3.89E-02
94	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.43E-02
95	GO:0008422: beta-glucosidase activity	4.43E-02
96	GO:0050661: NADP binding	4.57E-02
97	GO:0051539: 4 iron, 4 sulfur cluster binding	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	7.91E-07
2	GO:0005911: cell-cell junction	2.27E-04
3	GO:0016442: RISC complex	2.27E-04
4	GO:0000145: exocyst	2.49E-04
5	GO:0010494: cytoplasmic stress granule	3.00E-04
6	GO:0000159: protein phosphatase type 2A complex	4.83E-04
7	GO:0080085: signal recognition particle, chloroplast targeting	5.05E-04
8	GO:0070062: extracellular exosome	1.17E-03
9	GO:0010008: endosome membrane	1.82E-03
10	GO:0005768: endosome	1.88E-03
11	GO:0016021: integral component of membrane	2.25E-03
12	GO:0030173: integral component of Golgi membrane	2.94E-03
13	GO:0016363: nuclear matrix	2.94E-03
14	GO:0031902: late endosome membrane	6.58E-03
15	GO:0048471: perinuclear region of cytoplasm	7.20E-03
16	GO:0019013: viral nucleocapsid	8.66E-03
17	GO:0043234: protein complex	1.10E-02
18	GO:0030136: clathrin-coated vesicle	1.73E-02
19	GO:0005783: endoplasmic reticulum	1.79E-02
20	GO:0043231: intracellular membrane-bounded organelle	1.88E-02
21	GO:0005770: late endosome	1.93E-02
22	GO:0032580: Golgi cisterna membrane	2.57E-02
23	GO:0005778: peroxisomal membrane	2.68E-02
24	GO:0000932: P-body	2.91E-02
25	GO:0005788: endoplasmic reticulum lumen	3.03E-02
26	GO:0009506: plasmodesma	3.46E-02
27	GO:0019005: SCF ubiquitin ligase complex	3.52E-02