Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G48020

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903647: negative regulation of chlorophyll catabolic process0.00E+00
2GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
3GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
4GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase0.00E+00
5GO:0006592: ornithine biosynthetic process0.00E+00
6GO:0048870: cell motility0.00E+00
7GO:0006593: ornithine catabolic process0.00E+00
8GO:0071284: cellular response to lead ion0.00E+00
9GO:0015833: peptide transport0.00E+00
10GO:0043171: peptide catabolic process0.00E+00
11GO:0006099: tricarboxylic acid cycle1.59E-06
12GO:0015996: chlorophyll catabolic process2.94E-06
13GO:0006555: methionine metabolic process5.54E-05
14GO:0055114: oxidation-reduction process6.90E-05
15GO:0006120: mitochondrial electron transport, NADH to ubiquinone7.74E-05
16GO:0019509: L-methionine salvage from methylthioadenosine7.74E-05
17GO:0003400: regulation of COPII vesicle coating1.73E-04
18GO:0019544: arginine catabolic process to glutamate1.73E-04
19GO:0009240: isopentenyl diphosphate biosynthetic process1.73E-04
20GO:0031539: positive regulation of anthocyanin metabolic process1.73E-04
21GO:0031468: nuclear envelope reassembly1.73E-04
22GO:0007163: establishment or maintenance of cell polarity3.92E-04
23GO:0042939: tripeptide transport3.92E-04
24GO:0019441: tryptophan catabolic process to kynurenine3.92E-04
25GO:0050992: dimethylallyl diphosphate biosynthetic process3.92E-04
26GO:0046939: nucleotide phosphorylation3.92E-04
27GO:0009915: phloem sucrose loading3.92E-04
28GO:0006212: uracil catabolic process3.92E-04
29GO:0043255: regulation of carbohydrate biosynthetic process3.92E-04
30GO:0019483: beta-alanine biosynthetic process3.92E-04
31GO:0009651: response to salt stress4.04E-04
32GO:0009853: photorespiration4.38E-04
33GO:0007030: Golgi organization5.46E-04
34GO:0051646: mitochondrion localization6.40E-04
35GO:0043617: cellular response to sucrose starvation6.40E-04
36GO:0006760: folic acid-containing compound metabolic process6.40E-04
37GO:0006081: cellular aldehyde metabolic process6.40E-04
38GO:0045836: positive regulation of meiotic nuclear division6.40E-04
39GO:0044746: amino acid transmembrane export6.40E-04
40GO:0006487: protein N-linked glycosylation6.71E-04
41GO:0009963: positive regulation of flavonoid biosynthetic process9.13E-04
42GO:0006516: glycoprotein catabolic process9.13E-04
43GO:1901332: negative regulation of lateral root development9.13E-04
44GO:0051603: proteolysis involved in cellular protein catabolic process9.17E-04
45GO:0042938: dipeptide transport1.21E-03
46GO:0015976: carbon utilization1.21E-03
47GO:0015991: ATP hydrolysis coupled proton transport1.21E-03
48GO:0071249: cellular response to nitrate1.21E-03
49GO:0015986: ATP synthesis coupled proton transport1.40E-03
50GO:0030041: actin filament polymerization1.54E-03
51GO:0097428: protein maturation by iron-sulfur cluster transfer1.54E-03
52GO:0009229: thiamine diphosphate biosynthetic process1.54E-03
53GO:0018344: protein geranylgeranylation1.54E-03
54GO:0045927: positive regulation of growth1.54E-03
55GO:0003006: developmental process involved in reproduction1.89E-03
56GO:0009228: thiamine biosynthetic process1.89E-03
57GO:0006561: proline biosynthetic process1.89E-03
58GO:0010304: PSII associated light-harvesting complex II catabolic process1.89E-03
59GO:0042732: D-xylose metabolic process1.89E-03
60GO:0010189: vitamin E biosynthetic process2.27E-03
61GO:0009615: response to virus2.30E-03
62GO:0009816: defense response to bacterium, incompatible interaction2.43E-03
63GO:0005975: carbohydrate metabolic process2.45E-03
64GO:0010044: response to aluminum ion2.67E-03
65GO:0080027: response to herbivore2.67E-03
66GO:0006506: GPI anchor biosynthetic process3.09E-03
67GO:0000028: ribosomal small subunit assembly3.09E-03
68GO:0045010: actin nucleation3.09E-03
69GO:0016559: peroxisome fission3.09E-03
70GO:0009787: regulation of abscisic acid-activated signaling pathway3.09E-03
71GO:0006811: ion transport3.29E-03
72GO:0006526: arginine biosynthetic process3.54E-03
73GO:0043562: cellular response to nitrogen levels3.54E-03
74GO:0010099: regulation of photomorphogenesis3.54E-03
75GO:0006002: fructose 6-phosphate metabolic process3.54E-03
76GO:0006754: ATP biosynthetic process4.00E-03
77GO:0000902: cell morphogenesis4.00E-03
78GO:0006098: pentose-phosphate shunt4.00E-03
79GO:0009821: alkaloid biosynthetic process4.00E-03
80GO:0080144: amino acid homeostasis4.00E-03
81GO:0009926: auxin polar transport4.86E-03
82GO:0000103: sulfate assimilation4.99E-03
83GO:0043069: negative regulation of programmed cell death4.99E-03
84GO:0045036: protein targeting to chloroplast4.99E-03
85GO:0009636: response to toxic substance5.46E-03
86GO:0010015: root morphogenesis5.52E-03
87GO:0010152: pollen maturation6.06E-03
88GO:0006807: nitrogen compound metabolic process6.61E-03
89GO:0009691: cytokinin biosynthetic process6.61E-03
90GO:0006108: malate metabolic process6.61E-03
91GO:0044550: secondary metabolite biosynthetic process6.90E-03
92GO:0009266: response to temperature stimulus7.20E-03
93GO:0002237: response to molecule of bacterial origin7.20E-03
94GO:0010039: response to iron ion7.79E-03
95GO:0010053: root epidermal cell differentiation7.79E-03
96GO:0007031: peroxisome organization7.79E-03
97GO:0042343: indole glucosinolate metabolic process7.79E-03
98GO:0006810: transport7.95E-03
99GO:0048316: seed development8.00E-03
100GO:0009626: plant-type hypersensitive response8.25E-03
101GO:0042753: positive regulation of circadian rhythm8.41E-03
102GO:0006636: unsaturated fatty acid biosynthetic process8.41E-03
103GO:2000377: regulation of reactive oxygen species metabolic process9.03E-03
104GO:0051302: regulation of cell division9.69E-03
105GO:0008299: isoprenoid biosynthetic process9.69E-03
106GO:0003333: amino acid transmembrane transport1.03E-02
107GO:0098542: defense response to other organism1.03E-02
108GO:0010431: seed maturation1.03E-02
109GO:0009269: response to desiccation1.03E-02
110GO:0051321: meiotic cell cycle1.03E-02
111GO:0019748: secondary metabolic process1.10E-02
112GO:0010017: red or far-red light signaling pathway1.10E-02
113GO:0016226: iron-sulfur cluster assembly1.10E-02
114GO:0006012: galactose metabolic process1.17E-02
115GO:0009306: protein secretion1.24E-02
116GO:0048443: stamen development1.24E-02
117GO:0042391: regulation of membrane potential1.39E-02
118GO:0080022: primary root development1.39E-02
119GO:0034220: ion transmembrane transport1.39E-02
120GO:0010154: fruit development1.47E-02
121GO:0006662: glycerol ether metabolic process1.47E-02
122GO:0009958: positive gravitropism1.47E-02
123GO:0061025: membrane fusion1.54E-02
124GO:0009646: response to absence of light1.54E-02
125GO:0010150: leaf senescence1.62E-02
126GO:0055072: iron ion homeostasis1.62E-02
127GO:0006635: fatty acid beta-oxidation1.70E-02
128GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.70E-02
129GO:0010090: trichome morphogenesis1.87E-02
130GO:1901657: glycosyl compound metabolic process1.87E-02
131GO:0009735: response to cytokinin1.88E-02
132GO:0006914: autophagy1.95E-02
133GO:0051607: defense response to virus2.12E-02
134GO:0009627: systemic acquired resistance2.39E-02
135GO:0006888: ER to Golgi vesicle-mediated transport2.48E-02
136GO:0015995: chlorophyll biosynthetic process2.48E-02
137GO:0008219: cell death2.67E-02
138GO:0009817: defense response to fungus, incompatible interaction2.67E-02
139GO:0009832: plant-type cell wall biogenesis2.77E-02
140GO:0010311: lateral root formation2.77E-02
141GO:0055085: transmembrane transport2.84E-02
142GO:0010218: response to far red light2.87E-02
143GO:0006499: N-terminal protein myristoylation2.87E-02
144GO:0009407: toxin catabolic process2.87E-02
145GO:0009723: response to ethylene2.90E-02
146GO:0048527: lateral root development2.96E-02
147GO:0006511: ubiquitin-dependent protein catabolic process3.09E-02
148GO:0034599: cellular response to oxidative stress3.27E-02
149GO:0006631: fatty acid metabolic process3.58E-02
150GO:0009640: photomorphogenesis3.79E-02
151GO:0010114: response to red light3.79E-02
152GO:0009744: response to sucrose3.79E-02
153GO:0031347: regulation of defense response4.34E-02
154GO:0042538: hyperosmotic salinity response4.45E-02
155GO:0009585: red, far-red light phototransduction4.68E-02
156GO:0009809: lignin biosynthetic process4.68E-02
157GO:0006486: protein glycosylation4.68E-02
158GO:0010224: response to UV-B4.80E-02
159GO:0009414: response to water deprivation4.89E-02
160GO:0006857: oligopeptide transport4.91E-02
RankGO TermAdjusted P value
1GO:0015334: high-affinity oligopeptide transporter activity0.00E+00
2GO:0050334: thiaminase activity0.00E+00
3GO:0010176: homogentisate phytyltransferase activity0.00E+00
4GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
5GO:0008777: acetylornithine deacetylase activity0.00E+00
6GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
7GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
8GO:0003837: beta-ureidopropionase activity0.00E+00
9GO:0009045: xylose isomerase activity0.00E+00
10GO:0080124: pheophytinase activity0.00E+00
11GO:0015197: peptide transporter activity0.00E+00
12GO:0032441: pheophorbide a oxygenase activity0.00E+00
13GO:0004557: alpha-galactosidase activity5.37E-06
14GO:0052692: raffinose alpha-galactosidase activity5.37E-06
15GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity5.37E-06
16GO:0008137: NADH dehydrogenase (ubiquinone) activity5.47E-06
17GO:0004576: oligosaccharyl transferase activity2.30E-05
18GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity3.73E-05
19GO:0070006: metalloaminopeptidase activity1.73E-04
20GO:0034256: chlorophyll(ide) b reductase activity1.73E-04
21GO:0019707: protein-cysteine S-acyltransferase activity1.73E-04
22GO:0019786: Atg8-specific protease activity1.73E-04
23GO:0030941: chloroplast targeting sequence binding1.73E-04
24GO:0016229: steroid dehydrogenase activity1.73E-04
25GO:0010013: N-1-naphthylphthalamic acid binding1.73E-04
26GO:0004560: alpha-L-fucosidase activity1.73E-04
27GO:0070401: NADP+ binding1.73E-04
28GO:0004452: isopentenyl-diphosphate delta-isomerase activity1.73E-04
29GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity1.73E-04
30GO:0005090: Sar guanyl-nucleotide exchange factor activity1.73E-04
31GO:0046961: proton-transporting ATPase activity, rotational mechanism3.31E-04
32GO:0004129: cytochrome-c oxidase activity3.31E-04
33GO:0019779: Atg8 activating enzyme activity3.92E-04
34GO:0004061: arylformamidase activity3.92E-04
35GO:0051980: iron-nicotianamine transmembrane transporter activity3.92E-04
36GO:0042937: tripeptide transporter activity3.92E-04
37GO:0032403: protein complex binding6.40E-04
38GO:0004663: Rab geranylgeranyltransferase activity6.40E-04
39GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity6.40E-04
40GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity6.40E-04
41GO:0010277: chlorophyllide a oxygenase [overall] activity6.40E-04
42GO:0051537: 2 iron, 2 sulfur cluster binding6.68E-04
43GO:0004298: threonine-type endopeptidase activity8.10E-04
44GO:0004108: citrate (Si)-synthase activity9.13E-04
45GO:0016656: monodehydroascorbate reductase (NADH) activity9.13E-04
46GO:0015186: L-glutamine transmembrane transporter activity9.13E-04
47GO:0019201: nucleotide kinase activity9.13E-04
48GO:0019776: Atg8 ligase activity1.21E-03
49GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor1.21E-03
50GO:0042277: peptide binding1.21E-03
51GO:0004301: epoxide hydrolase activity1.21E-03
52GO:0004659: prenyltransferase activity1.21E-03
53GO:0010011: auxin binding1.21E-03
54GO:0042936: dipeptide transporter activity1.21E-03
55GO:0008198: ferrous iron binding1.54E-03
56GO:0004197: cysteine-type endopeptidase activity1.70E-03
57GO:0051117: ATPase binding1.89E-03
58GO:0016615: malate dehydrogenase activity1.89E-03
59GO:0004029: aldehyde dehydrogenase (NAD) activity1.89E-03
60GO:0030060: L-malate dehydrogenase activity2.27E-03
61GO:0005261: cation channel activity2.27E-03
62GO:0051020: GTPase binding2.27E-03
63GO:0004017: adenylate kinase activity2.27E-03
64GO:0003872: 6-phosphofructokinase activity2.67E-03
65GO:0004033: aldo-keto reductase (NADP) activity3.09E-03
66GO:0004869: cysteine-type endopeptidase inhibitor activity3.09E-03
67GO:0004034: aldose 1-epimerase activity3.09E-03
68GO:0042802: identical protein binding3.68E-03
69GO:0005506: iron ion binding3.95E-03
70GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism4.00E-03
71GO:0047617: acyl-CoA hydrolase activity4.49E-03
72GO:0016844: strictosidine synthase activity4.49E-03
73GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity4.49E-03
74GO:0009672: auxin:proton symporter activity4.49E-03
75GO:0016788: hydrolase activity, acting on ester bonds4.83E-03
76GO:0004177: aminopeptidase activity5.52E-03
77GO:0015198: oligopeptide transporter activity6.06E-03
78GO:0008233: peptidase activity6.07E-03
79GO:0016491: oxidoreductase activity6.57E-03
80GO:0004089: carbonate dehydratase activity6.61E-03
81GO:0008234: cysteine-type peptidase activity7.25E-03
82GO:0030552: cAMP binding7.79E-03
83GO:0030553: cGMP binding7.79E-03
84GO:0008061: chitin binding7.79E-03
85GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen8.60E-03
86GO:0022857: transmembrane transporter activity8.78E-03
87GO:0051536: iron-sulfur cluster binding9.03E-03
88GO:0043130: ubiquitin binding9.03E-03
89GO:0016746: transferase activity, transferring acyl groups9.61E-03
90GO:0008324: cation transmembrane transporter activity9.69E-03
91GO:0005216: ion channel activity9.69E-03
92GO:0004540: ribonuclease activity1.03E-02
93GO:0047134: protein-disulfide reductase activity1.32E-02
94GO:0005249: voltage-gated potassium channel activity1.39E-02
95GO:0030551: cyclic nucleotide binding1.39E-02
96GO:0046933: proton-transporting ATP synthase activity, rotational mechanism1.47E-02
97GO:0004791: thioredoxin-disulfide reductase activity1.54E-02
98GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.87E-02
99GO:0008237: metallopeptidase activity2.04E-02
100GO:0015250: water channel activity2.21E-02
101GO:0009931: calcium-dependent protein serine/threonine kinase activity2.39E-02
102GO:0004683: calmodulin-dependent protein kinase activity2.48E-02
103GO:0102483: scopolin beta-glucosidase activity2.48E-02
104GO:0005096: GTPase activator activity2.77E-02
105GO:0050660: flavin adenine dinucleotide binding2.90E-02
106GO:0050897: cobalt ion binding2.96E-02
107GO:0005507: copper ion binding3.27E-02
108GO:0019825: oxygen binding3.27E-02
109GO:0008422: beta-glucosidase activity3.37E-02
110GO:0051539: 4 iron, 4 sulfur cluster binding3.47E-02
111GO:0004364: glutathione transferase activity3.68E-02
112GO:0004185: serine-type carboxypeptidase activity3.79E-02
113GO:0046872: metal ion binding3.91E-02
114GO:0005198: structural molecule activity4.12E-02
115GO:0003690: double-stranded DNA binding4.80E-02
116GO:0009055: electron carrier activity4.89E-02
RankGO TermAdjusted P value
1GO:0000221: vacuolar proton-transporting V-type ATPase, V1 domain0.00E+00
2GO:0005773: vacuole2.43E-08
3GO:0005747: mitochondrial respiratory chain complex I4.51E-07
4GO:0045273: respiratory chain complex II2.01E-06
5GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)2.01E-06
6GO:0000325: plant-type vacuole2.83E-05
7GO:0008250: oligosaccharyltransferase complex3.73E-05
8GO:0045271: respiratory chain complex I3.89E-05
9GO:0005759: mitochondrial matrix4.23E-05
10GO:0005829: cytosol1.13E-04
11GO:0005774: vacuolar membrane1.20E-04
12GO:0005783: endoplasmic reticulum3.44E-04
13GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain3.92E-04
14GO:0005764: lysosome4.87E-04
15GO:0005753: mitochondrial proton-transporting ATP synthase complex5.46E-04
16GO:0005838: proteasome regulatory particle6.40E-04
17GO:0031966: mitochondrial membrane8.05E-04
18GO:0005839: proteasome core complex8.10E-04
19GO:0005968: Rab-protein geranylgeranyltransferase complex9.13E-04
20GO:0005775: vacuolar lumen9.13E-04
21GO:0005776: autophagosome1.21E-03
22GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)1.21E-03
23GO:0005777: peroxisome1.50E-03
24GO:0055035: plastid thylakoid membrane1.54E-03
25GO:0005746: mitochondrial respiratory chain1.54E-03
26GO:0005945: 6-phosphofructokinase complex1.54E-03
27GO:0031209: SCAR complex1.89E-03
28GO:0005778: peroxisomal membrane2.05E-03
29GO:0031359: integral component of chloroplast outer membrane2.67E-03
30GO:0009705: plant-type vacuole membrane2.71E-03
31GO:0000421: autophagosome membrane3.09E-03
32GO:0019773: proteasome core complex, alpha-subunit complex3.54E-03
33GO:0005779: integral component of peroxisomal membrane3.54E-03
34GO:0031090: organelle membrane4.00E-03
35GO:0005763: mitochondrial small ribosomal subunit4.00E-03
36GO:0010494: cytoplasmic stress granule4.00E-03
37GO:0048046: apoplast4.66E-03
38GO:0000502: proteasome complex6.55E-03
39GO:0030176: integral component of endoplasmic reticulum membrane7.79E-03
40GO:0016020: membrane7.91E-03
41GO:0005758: mitochondrial intermembrane space9.03E-03
42GO:0070469: respiratory chain9.69E-03
43GO:0031410: cytoplasmic vesicle1.10E-02
44GO:0005794: Golgi apparatus1.27E-02
45GO:0005615: extracellular space1.81E-02
46GO:0071944: cell periphery1.87E-02
47GO:0009536: plastid2.01E-02
48GO:0000932: P-body2.21E-02
49GO:0005739: mitochondrion2.22E-02
50GO:0005886: plasma membrane2.32E-02
51GO:0005789: endoplasmic reticulum membrane2.78E-02
52GO:0005856: cytoskeleton4.12E-02
53GO:0005737: cytoplasm4.26E-02
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Gene type



Gene DE type