GO Enrichment Analysis of Co-expressed Genes with
AT5G47760
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010202: response to low fluence red light stimulus | 0.00E+00 |
| 2 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 3 | GO:0017012: protein-phytochromobilin linkage | 0.00E+00 |
| 4 | GO:0009902: chloroplast relocation | 2.92E-06 |
| 5 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.02E-05 |
| 6 | GO:0055114: oxidation-reduction process | 3.81E-05 |
| 7 | GO:0055062: phosphate ion homeostasis | 4.84E-05 |
| 8 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 5.18E-05 |
| 9 | GO:0006567: threonine catabolic process | 5.18E-05 |
| 10 | GO:1902265: abscisic acid homeostasis | 5.18E-05 |
| 11 | GO:0010343: singlet oxygen-mediated programmed cell death | 1.27E-04 |
| 12 | GO:2000071: regulation of defense response by callose deposition | 1.27E-04 |
| 13 | GO:0010617: circadian regulation of calcium ion oscillation | 1.27E-04 |
| 14 | GO:0080183: response to photooxidative stress | 1.27E-04 |
| 15 | GO:0043100: pyrimidine nucleobase salvage | 1.27E-04 |
| 16 | GO:0031022: nuclear migration along microfilament | 2.17E-04 |
| 17 | GO:1901562: response to paraquat | 2.17E-04 |
| 18 | GO:0006520: cellular amino acid metabolic process | 2.71E-04 |
| 19 | GO:0009584: detection of visible light | 3.17E-04 |
| 20 | GO:0010148: transpiration | 3.17E-04 |
| 21 | GO:0006882: cellular zinc ion homeostasis | 3.17E-04 |
| 22 | GO:0006545: glycine biosynthetic process | 4.24E-04 |
| 23 | GO:0009649: entrainment of circadian clock | 4.24E-04 |
| 24 | GO:0034613: cellular protein localization | 4.24E-04 |
| 25 | GO:0010021: amylopectin biosynthetic process | 4.24E-04 |
| 26 | GO:0009687: abscisic acid metabolic process | 4.24E-04 |
| 27 | GO:0070534: protein K63-linked ubiquitination | 4.24E-04 |
| 28 | GO:0010029: regulation of seed germination | 5.10E-04 |
| 29 | GO:0016120: carotene biosynthetic process | 5.39E-04 |
| 30 | GO:0000304: response to singlet oxygen | 5.39E-04 |
| 31 | GO:0070814: hydrogen sulfide biosynthetic process | 6.60E-04 |
| 32 | GO:0006301: postreplication repair | 6.60E-04 |
| 33 | GO:0009867: jasmonic acid mediated signaling pathway | 7.83E-04 |
| 34 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 7.87E-04 |
| 35 | GO:0009903: chloroplast avoidance movement | 7.87E-04 |
| 36 | GO:0006099: tricarboxylic acid cycle | 8.17E-04 |
| 37 | GO:0010161: red light signaling pathway | 9.18E-04 |
| 38 | GO:0009396: folic acid-containing compound biosynthetic process | 9.18E-04 |
| 39 | GO:0030026: cellular manganese ion homeostasis | 9.18E-04 |
| 40 | GO:0050790: regulation of catalytic activity | 9.18E-04 |
| 41 | GO:0010374: stomatal complex development | 9.18E-04 |
| 42 | GO:0030091: protein repair | 1.06E-03 |
| 43 | GO:0009850: auxin metabolic process | 1.06E-03 |
| 44 | GO:0006102: isocitrate metabolic process | 1.06E-03 |
| 45 | GO:0031347: regulation of defense response | 1.19E-03 |
| 46 | GO:0015996: chlorophyll catabolic process | 1.20E-03 |
| 47 | GO:0009638: phototropism | 1.50E-03 |
| 48 | GO:0035999: tetrahydrofolate interconversion | 1.50E-03 |
| 49 | GO:0009970: cellular response to sulfate starvation | 1.67E-03 |
| 50 | GO:0006325: chromatin organization | 1.67E-03 |
| 51 | GO:0000103: sulfate assimilation | 1.67E-03 |
| 52 | GO:0045036: protein targeting to chloroplast | 1.67E-03 |
| 53 | GO:0009620: response to fungus | 1.70E-03 |
| 54 | GO:0006816: calcium ion transport | 1.84E-03 |
| 55 | GO:0009682: induced systemic resistance | 1.84E-03 |
| 56 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.84E-03 |
| 57 | GO:0009409: response to cold | 1.95E-03 |
| 58 | GO:0030048: actin filament-based movement | 2.19E-03 |
| 59 | GO:0006108: malate metabolic process | 2.19E-03 |
| 60 | GO:2000028: regulation of photoperiodism, flowering | 2.19E-03 |
| 61 | GO:0050826: response to freezing | 2.19E-03 |
| 62 | GO:0009718: anthocyanin-containing compound biosynthetic process | 2.19E-03 |
| 63 | GO:0009266: response to temperature stimulus | 2.38E-03 |
| 64 | GO:0051017: actin filament bundle assembly | 2.96E-03 |
| 65 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 3.59E-03 |
| 66 | GO:0006012: galactose metabolic process | 3.80E-03 |
| 67 | GO:0009693: ethylene biosynthetic process | 3.80E-03 |
| 68 | GO:0016117: carotenoid biosynthetic process | 4.26E-03 |
| 69 | GO:0010118: stomatal movement | 4.49E-03 |
| 70 | GO:0042391: regulation of membrane potential | 4.49E-03 |
| 71 | GO:0019252: starch biosynthetic process | 5.21E-03 |
| 72 | GO:0002229: defense response to oomycetes | 5.46E-03 |
| 73 | GO:0009630: gravitropism | 5.71E-03 |
| 74 | GO:1901657: glycosyl compound metabolic process | 5.97E-03 |
| 75 | GO:0006464: cellular protein modification process | 6.23E-03 |
| 76 | GO:0016126: sterol biosynthetic process | 7.04E-03 |
| 77 | GO:0010411: xyloglucan metabolic process | 7.88E-03 |
| 78 | GO:0018298: protein-chromophore linkage | 8.46E-03 |
| 79 | GO:0009407: toxin catabolic process | 9.06E-03 |
| 80 | GO:0010218: response to far red light | 9.06E-03 |
| 81 | GO:0009631: cold acclimation | 9.36E-03 |
| 82 | GO:0007568: aging | 9.36E-03 |
| 83 | GO:0009853: photorespiration | 9.99E-03 |
| 84 | GO:0009637: response to blue light | 9.99E-03 |
| 85 | GO:0005975: carbohydrate metabolic process | 1.10E-02 |
| 86 | GO:0009640: photomorphogenesis | 1.19E-02 |
| 87 | GO:0009636: response to toxic substance | 1.30E-02 |
| 88 | GO:0009809: lignin biosynthetic process | 1.47E-02 |
| 89 | GO:0009585: red, far-red light phototransduction | 1.47E-02 |
| 90 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.51E-02 |
| 91 | GO:0009738: abscisic acid-activated signaling pathway | 1.54E-02 |
| 92 | GO:0006952: defense response | 1.65E-02 |
| 93 | GO:0009737: response to abscisic acid | 1.69E-02 |
| 94 | GO:0045893: positive regulation of transcription, DNA-templated | 1.83E-02 |
| 95 | GO:0009058: biosynthetic process | 2.31E-02 |
| 96 | GO:0042744: hydrogen peroxide catabolic process | 2.44E-02 |
| 97 | GO:0009414: response to water deprivation | 3.16E-02 |
| 98 | GO:0009617: response to bacterium | 3.17E-02 |
| 99 | GO:0042742: defense response to bacterium | 3.24E-02 |
| 100 | GO:0009658: chloroplast organization | 3.81E-02 |
| 101 | GO:0006970: response to osmotic stress | 4.02E-02 |
| 102 | GO:0080167: response to karrikin | 4.44E-02 |
| 103 | GO:0015979: photosynthesis | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 2 | GO:0015205: nucleobase transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 4 | GO:0031517: red light photoreceptor activity | 0.00E+00 |
| 5 | GO:0047504: (-)-menthol dehydrogenase activity | 0.00E+00 |
| 6 | GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity | 0.00E+00 |
| 7 | GO:0047501: (+)-neomenthol dehydrogenase activity | 0.00E+00 |
| 8 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 9 | GO:0008106: alcohol dehydrogenase (NADP+) activity | 1.51E-06 |
| 10 | GO:0046480: galactolipid galactosyltransferase activity | 5.18E-05 |
| 11 | GO:0080079: cellobiose glucosidase activity | 5.18E-05 |
| 12 | GO:0015085: calcium ion transmembrane transporter activity | 5.18E-05 |
| 13 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 5.18E-05 |
| 14 | GO:0008802: betaine-aldehyde dehydrogenase activity | 5.18E-05 |
| 15 | GO:1990841: promoter-specific chromatin binding | 5.18E-05 |
| 16 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 5.18E-05 |
| 17 | GO:0004793: threonine aldolase activity | 5.18E-05 |
| 18 | GO:0016783: sulfurtransferase activity | 5.18E-05 |
| 19 | GO:0008732: L-allo-threonine aldolase activity | 5.18E-05 |
| 20 | GO:0031516: far-red light photoreceptor activity | 5.18E-05 |
| 21 | GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity | 5.18E-05 |
| 22 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 5.18E-05 |
| 23 | GO:0033201: alpha-1,4-glucan synthase activity | 1.27E-04 |
| 24 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 1.27E-04 |
| 25 | GO:0009883: red or far-red light photoreceptor activity | 1.27E-04 |
| 26 | GO:0043425: bHLH transcription factor binding | 1.27E-04 |
| 27 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 2.17E-04 |
| 28 | GO:0004373: glycogen (starch) synthase activity | 2.17E-04 |
| 29 | GO:0004557: alpha-galactosidase activity | 2.17E-04 |
| 30 | GO:0008020: G-protein coupled photoreceptor activity | 2.17E-04 |
| 31 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 2.17E-04 |
| 32 | GO:0000254: C-4 methylsterol oxidase activity | 3.17E-04 |
| 33 | GO:0004792: thiosulfate sulfurtransferase activity | 3.17E-04 |
| 34 | GO:0015369: calcium:proton antiporter activity | 4.24E-04 |
| 35 | GO:0009011: starch synthase activity | 4.24E-04 |
| 36 | GO:0015368: calcium:cation antiporter activity | 4.24E-04 |
| 37 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 6.60E-04 |
| 38 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 6.60E-04 |
| 39 | GO:0030060: L-malate dehydrogenase activity | 7.87E-04 |
| 40 | GO:0005261: cation channel activity | 7.87E-04 |
| 41 | GO:0016621: cinnamoyl-CoA reductase activity | 9.18E-04 |
| 42 | GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity | 1.06E-03 |
| 43 | GO:0004034: aldose 1-epimerase activity | 1.06E-03 |
| 44 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.50E-03 |
| 45 | GO:0004673: protein histidine kinase activity | 1.67E-03 |
| 46 | GO:0004129: cytochrome-c oxidase activity | 1.84E-03 |
| 47 | GO:0016491: oxidoreductase activity | 1.87E-03 |
| 48 | GO:0008378: galactosyltransferase activity | 2.01E-03 |
| 49 | GO:0000155: phosphorelay sensor kinase activity | 2.19E-03 |
| 50 | GO:0030552: cAMP binding | 2.56E-03 |
| 51 | GO:0030553: cGMP binding | 2.56E-03 |
| 52 | GO:0005216: ion channel activity | 3.16E-03 |
| 53 | GO:0030551: cyclic nucleotide binding | 4.49E-03 |
| 54 | GO:0005249: voltage-gated potassium channel activity | 4.49E-03 |
| 55 | GO:0004601: peroxidase activity | 4.91E-03 |
| 56 | GO:0016853: isomerase activity | 4.96E-03 |
| 57 | GO:0050662: coenzyme binding | 4.96E-03 |
| 58 | GO:0048038: quinone binding | 5.46E-03 |
| 59 | GO:0004197: cysteine-type endopeptidase activity | 5.71E-03 |
| 60 | GO:0008483: transaminase activity | 6.49E-03 |
| 61 | GO:0016413: O-acetyltransferase activity | 6.76E-03 |
| 62 | GO:0008236: serine-type peptidase activity | 8.17E-03 |
| 63 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 9.99E-03 |
| 64 | GO:0003993: acid phosphatase activity | 1.03E-02 |
| 65 | GO:0008422: beta-glucosidase activity | 1.06E-02 |
| 66 | GO:0004364: glutathione transferase activity | 1.16E-02 |
| 67 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.26E-02 |
| 68 | GO:0051287: NAD binding | 1.37E-02 |
| 69 | GO:0031625: ubiquitin protein ligase binding | 1.58E-02 |
| 70 | GO:0008234: cysteine-type peptidase activity | 1.58E-02 |
| 71 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.77E-02 |
| 72 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.77E-02 |
| 73 | GO:0015035: protein disulfide oxidoreductase activity | 1.93E-02 |
| 74 | GO:0016758: transferase activity, transferring hexosyl groups | 2.18E-02 |
| 75 | GO:0016829: lyase activity | 2.35E-02 |
| 76 | GO:0030170: pyridoxal phosphate binding | 2.39E-02 |
| 77 | GO:0008194: UDP-glycosyltransferase activity | 3.03E-02 |
| 78 | GO:0016757: transferase activity, transferring glycosyl groups | 3.05E-02 |
| 79 | GO:0042802: identical protein binding | 3.31E-02 |
| 80 | GO:0003824: catalytic activity | 3.55E-02 |
| 81 | GO:0000287: magnesium ion binding | 3.76E-02 |
| 82 | GO:0061630: ubiquitin protein ligase activity | 4.60E-02 |
| 83 | GO:0004672: protein kinase activity | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.49E-05 |
| 2 | GO:0009509: chromoplast | 2.17E-04 |
| 3 | GO:0031372: UBC13-MMS2 complex | 4.24E-04 |
| 4 | GO:0009526: plastid envelope | 4.24E-04 |
| 5 | GO:0005829: cytosol | 4.46E-04 |
| 6 | GO:0031359: integral component of chloroplast outer membrane | 9.18E-04 |
| 7 | GO:0009501: amyloplast | 1.06E-03 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.35E-03 |
| 9 | GO:0016604: nuclear body | 1.50E-03 |
| 10 | GO:0016607: nuclear speck | 1.60E-03 |
| 11 | GO:0005884: actin filament | 1.84E-03 |
| 12 | GO:0005764: lysosome | 2.38E-03 |
| 13 | GO:0005777: peroxisome | 3.16E-03 |
| 14 | GO:0042651: thylakoid membrane | 3.16E-03 |
| 15 | GO:0009707: chloroplast outer membrane | 8.46E-03 |
| 16 | GO:0005773: vacuole | 1.54E-02 |
| 17 | GO:0009706: chloroplast inner membrane | 1.89E-02 |
| 18 | GO:0010287: plastoglobule | 2.14E-02 |
| 19 | GO:0005623: cell | 2.26E-02 |
| 20 | GO:0005759: mitochondrial matrix | 2.61E-02 |
| 21 | GO:0009705: plant-type vacuole membrane | 2.79E-02 |
| 22 | GO:0005615: extracellular space | 3.03E-02 |
| 23 | GO:0009505: plant-type cell wall | 4.05E-02 |
| 24 | GO:0031969: chloroplast membrane | 4.44E-02 |
| 25 | GO:0009941: chloroplast envelope | 4.53E-02 |