GO Enrichment Analysis of Co-expressed Genes with
AT5G47210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090239: regulation of histone H4 acetylation | 0.00E+00 |
| 2 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 3 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 4 | GO:0006412: translation | 3.32E-118 |
| 5 | GO:0042254: ribosome biogenesis | 2.14E-34 |
| 6 | GO:0000027: ribosomal large subunit assembly | 2.23E-13 |
| 7 | GO:0006626: protein targeting to mitochondrion | 1.75E-06 |
| 8 | GO:0048569: post-embryonic animal organ development | 4.70E-06 |
| 9 | GO:0000028: ribosomal small subunit assembly | 9.40E-06 |
| 10 | GO:0009735: response to cytokinin | 1.10E-05 |
| 11 | GO:1902626: assembly of large subunit precursor of preribosome | 1.67E-05 |
| 12 | GO:0009955: adaxial/abaxial pattern specification | 2.05E-04 |
| 13 | GO:0006458: 'de novo' protein folding | 2.05E-04 |
| 14 | GO:0016444: somatic cell DNA recombination | 2.05E-04 |
| 15 | GO:0008283: cell proliferation | 2.68E-04 |
| 16 | GO:0008033: tRNA processing | 3.04E-04 |
| 17 | GO:0031060: regulation of histone methylation | 3.22E-04 |
| 18 | GO:0006434: seryl-tRNA aminoacylation | 3.22E-04 |
| 19 | GO:0000494: box C/D snoRNA 3'-end processing | 3.22E-04 |
| 20 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.22E-04 |
| 21 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.22E-04 |
| 22 | GO:1990258: histone glutamine methylation | 3.22E-04 |
| 23 | GO:0006407: rRNA export from nucleus | 3.22E-04 |
| 24 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 3.22E-04 |
| 25 | GO:0015801: aromatic amino acid transport | 3.22E-04 |
| 26 | GO:0048453: sepal formation | 3.22E-04 |
| 27 | GO:0035266: meristem growth | 3.22E-04 |
| 28 | GO:0006364: rRNA processing | 4.33E-04 |
| 29 | GO:0000387: spliceosomal snRNP assembly | 5.85E-04 |
| 30 | GO:0043981: histone H4-K5 acetylation | 7.02E-04 |
| 31 | GO:0010198: synergid death | 7.02E-04 |
| 32 | GO:0009967: positive regulation of signal transduction | 7.02E-04 |
| 33 | GO:0006435: threonyl-tRNA aminoacylation | 7.02E-04 |
| 34 | GO:0045859: regulation of protein kinase activity | 7.02E-04 |
| 35 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 7.02E-04 |
| 36 | GO:0045041: protein import into mitochondrial intermembrane space | 7.02E-04 |
| 37 | GO:0042256: mature ribosome assembly | 1.14E-03 |
| 38 | GO:0010338: leaf formation | 1.14E-03 |
| 39 | GO:0010452: histone H3-K36 methylation | 1.14E-03 |
| 40 | GO:0046168: glycerol-3-phosphate catabolic process | 1.14E-03 |
| 41 | GO:1904278: positive regulation of wax biosynthetic process | 1.14E-03 |
| 42 | GO:0006446: regulation of translational initiation | 1.14E-03 |
| 43 | GO:0009150: purine ribonucleotide metabolic process | 1.14E-03 |
| 44 | GO:0002181: cytoplasmic translation | 1.14E-03 |
| 45 | GO:0010476: gibberellin mediated signaling pathway | 1.14E-03 |
| 46 | GO:0030150: protein import into mitochondrial matrix | 1.57E-03 |
| 47 | GO:0070301: cellular response to hydrogen peroxide | 1.63E-03 |
| 48 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.63E-03 |
| 49 | GO:0006241: CTP biosynthetic process | 1.63E-03 |
| 50 | GO:0006072: glycerol-3-phosphate metabolic process | 1.63E-03 |
| 51 | GO:0006165: nucleoside diphosphate phosphorylation | 1.63E-03 |
| 52 | GO:0006228: UTP biosynthetic process | 1.63E-03 |
| 53 | GO:0006164: purine nucleotide biosynthetic process | 1.63E-03 |
| 54 | GO:0009558: embryo sac cellularization | 1.63E-03 |
| 55 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 1.63E-03 |
| 56 | GO:0006334: nucleosome assembly | 1.91E-03 |
| 57 | GO:0061077: chaperone-mediated protein folding | 1.91E-03 |
| 58 | GO:0007005: mitochondrion organization | 2.09E-03 |
| 59 | GO:0009965: leaf morphogenesis | 2.13E-03 |
| 60 | GO:0042274: ribosomal small subunit biogenesis | 2.19E-03 |
| 61 | GO:0006183: GTP biosynthetic process | 2.19E-03 |
| 62 | GO:0009165: nucleotide biosynthetic process | 2.19E-03 |
| 63 | GO:0031167: rRNA methylation | 2.80E-03 |
| 64 | GO:0019408: dolichol biosynthetic process | 2.80E-03 |
| 65 | GO:0010305: leaf vascular tissue pattern formation | 3.12E-03 |
| 66 | GO:0010197: polar nucleus fusion | 3.12E-03 |
| 67 | GO:0051568: histone H3-K4 methylation | 3.46E-03 |
| 68 | GO:0000470: maturation of LSU-rRNA | 3.46E-03 |
| 69 | GO:0010358: leaf shaping | 3.46E-03 |
| 70 | GO:0000741: karyogamy | 3.46E-03 |
| 71 | GO:0001731: formation of translation preinitiation complex | 3.46E-03 |
| 72 | GO:0080156: mitochondrial mRNA modification | 3.85E-03 |
| 73 | GO:0000911: cytokinesis by cell plate formation | 4.17E-03 |
| 74 | GO:0042026: protein refolding | 4.17E-03 |
| 75 | GO:0000245: spliceosomal complex assembly | 4.17E-03 |
| 76 | GO:0009793: embryo development ending in seed dormancy | 4.58E-03 |
| 77 | GO:0009645: response to low light intensity stimulus | 4.92E-03 |
| 78 | GO:0000398: mRNA splicing, via spliceosome | 5.05E-03 |
| 79 | GO:0050821: protein stabilization | 5.71E-03 |
| 80 | GO:0001510: RNA methylation | 6.55E-03 |
| 81 | GO:0001558: regulation of cell growth | 6.55E-03 |
| 82 | GO:0030968: endoplasmic reticulum unfolded protein response | 6.55E-03 |
| 83 | GO:0043562: cellular response to nitrogen levels | 6.55E-03 |
| 84 | GO:0007338: single fertilization | 7.42E-03 |
| 85 | GO:0009245: lipid A biosynthetic process | 7.42E-03 |
| 86 | GO:0048507: meristem development | 7.42E-03 |
| 87 | GO:0006189: 'de novo' IMP biosynthetic process | 7.42E-03 |
| 88 | GO:0010311: lateral root formation | 7.64E-03 |
| 89 | GO:0010449: root meristem growth | 8.34E-03 |
| 90 | GO:0000724: double-strand break repair via homologous recombination | 8.81E-03 |
| 91 | GO:0045036: protein targeting to chloroplast | 9.30E-03 |
| 92 | GO:0016441: posttranscriptional gene silencing | 9.30E-03 |
| 93 | GO:0015031: protein transport | 1.02E-02 |
| 94 | GO:0010015: root morphogenesis | 1.03E-02 |
| 95 | GO:0006913: nucleocytoplasmic transport | 1.03E-02 |
| 96 | GO:0009651: response to salt stress | 1.09E-02 |
| 97 | GO:0006790: sulfur compound metabolic process | 1.13E-02 |
| 98 | GO:0006820: anion transport | 1.13E-02 |
| 99 | GO:0045037: protein import into chloroplast stroma | 1.13E-02 |
| 100 | GO:2000012: regulation of auxin polar transport | 1.24E-02 |
| 101 | GO:0010102: lateral root morphogenesis | 1.24E-02 |
| 102 | GO:2000028: regulation of photoperiodism, flowering | 1.24E-02 |
| 103 | GO:0009644: response to high light intensity | 1.29E-02 |
| 104 | GO:0048467: gynoecium development | 1.35E-02 |
| 105 | GO:0048440: carpel development | 1.35E-02 |
| 106 | GO:0009933: meristem structural organization | 1.35E-02 |
| 107 | GO:0046686: response to cadmium ion | 1.50E-02 |
| 108 | GO:0009116: nucleoside metabolic process | 1.70E-02 |
| 109 | GO:0009908: flower development | 1.70E-02 |
| 110 | GO:0006487: protein N-linked glycosylation | 1.70E-02 |
| 111 | GO:0051302: regulation of cell division | 1.83E-02 |
| 112 | GO:0010073: meristem maintenance | 1.83E-02 |
| 113 | GO:0003333: amino acid transmembrane transport | 1.95E-02 |
| 114 | GO:0071215: cellular response to abscisic acid stimulus | 2.22E-02 |
| 115 | GO:0010082: regulation of root meristem growth | 2.22E-02 |
| 116 | GO:0040007: growth | 2.22E-02 |
| 117 | GO:0009553: embryo sac development | 2.23E-02 |
| 118 | GO:0048443: stamen development | 2.35E-02 |
| 119 | GO:0000413: protein peptidyl-prolyl isomerization | 2.63E-02 |
| 120 | GO:0010183: pollen tube guidance | 3.07E-02 |
| 121 | GO:0009749: response to glucose | 3.07E-02 |
| 122 | GO:0009409: response to cold | 3.22E-02 |
| 123 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 3.23E-02 |
| 124 | GO:0006635: fatty acid beta-oxidation | 3.23E-02 |
| 125 | GO:0010090: trichome morphogenesis | 3.54E-02 |
| 126 | GO:0006633: fatty acid biosynthetic process | 3.61E-02 |
| 127 | GO:0009567: double fertilization forming a zygote and endosperm | 3.70E-02 |
| 128 | GO:0006413: translational initiation | 3.70E-02 |
| 129 | GO:0016579: protein deubiquitination | 4.03E-02 |
| 130 | GO:0009627: systemic acquired resistance | 4.53E-02 |
| 131 | GO:0042128: nitrate assimilation | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 1.05E-139 |
| 3 | GO:0003729: mRNA binding | 1.23E-35 |
| 4 | GO:0019843: rRNA binding | 2.18E-16 |
| 5 | GO:0003723: RNA binding | 2.12E-05 |
| 6 | GO:0008097: 5S rRNA binding | 3.71E-05 |
| 7 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 3.22E-04 |
| 8 | GO:0004828: serine-tRNA ligase activity | 3.22E-04 |
| 9 | GO:0004679: AMP-activated protein kinase activity | 3.22E-04 |
| 10 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 3.22E-04 |
| 11 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 3.22E-04 |
| 12 | GO:0005080: protein kinase C binding | 3.22E-04 |
| 13 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 3.22E-04 |
| 14 | GO:1990259: histone-glutamine methyltransferase activity | 3.22E-04 |
| 15 | GO:0035614: snRNA stem-loop binding | 3.22E-04 |
| 16 | GO:0016817: hydrolase activity, acting on acid anhydrides | 3.22E-04 |
| 17 | GO:0015173: aromatic amino acid transmembrane transporter activity | 7.02E-04 |
| 18 | GO:0004839: ubiquitin activating enzyme activity | 7.02E-04 |
| 19 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 7.02E-04 |
| 20 | GO:0005078: MAP-kinase scaffold activity | 7.02E-04 |
| 21 | GO:0004829: threonine-tRNA ligase activity | 7.02E-04 |
| 22 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 7.02E-04 |
| 23 | GO:0030619: U1 snRNA binding | 7.02E-04 |
| 24 | GO:0044183: protein binding involved in protein folding | 7.88E-04 |
| 25 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.92E-04 |
| 26 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 1.14E-03 |
| 27 | GO:0032947: protein complex scaffold | 1.14E-03 |
| 28 | GO:0070181: small ribosomal subunit rRNA binding | 1.14E-03 |
| 29 | GO:0008649: rRNA methyltransferase activity | 1.14E-03 |
| 30 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 1.14E-03 |
| 31 | GO:0042393: histone binding | 1.57E-03 |
| 32 | GO:0004749: ribose phosphate diphosphokinase activity | 1.63E-03 |
| 33 | GO:0004550: nucleoside diphosphate kinase activity | 1.63E-03 |
| 34 | GO:0047627: adenylylsulfatase activity | 1.63E-03 |
| 35 | GO:0008641: small protein activating enzyme activity | 2.80E-03 |
| 36 | GO:0045547: dehydrodolichyl diphosphate synthase activity | 2.80E-03 |
| 37 | GO:0004888: transmembrane signaling receptor activity | 2.80E-03 |
| 38 | GO:0005275: amine transmembrane transporter activity | 2.80E-03 |
| 39 | GO:0031369: translation initiation factor binding | 3.46E-03 |
| 40 | GO:0031177: phosphopantetheine binding | 3.46E-03 |
| 41 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 3.46E-03 |
| 42 | GO:0000035: acyl binding | 4.17E-03 |
| 43 | GO:0019887: protein kinase regulator activity | 4.17E-03 |
| 44 | GO:0051082: unfolded protein binding | 4.21E-03 |
| 45 | GO:0008235: metalloexopeptidase activity | 4.92E-03 |
| 46 | GO:0030515: snoRNA binding | 4.92E-03 |
| 47 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 5.71E-03 |
| 48 | GO:0000166: nucleotide binding | 5.71E-03 |
| 49 | GO:0043022: ribosome binding | 5.71E-03 |
| 50 | GO:0015288: porin activity | 5.71E-03 |
| 51 | GO:0008308: voltage-gated anion channel activity | 6.55E-03 |
| 52 | GO:0001055: RNA polymerase II activity | 8.34E-03 |
| 53 | GO:0001054: RNA polymerase I activity | 1.03E-02 |
| 54 | GO:0001056: RNA polymerase III activity | 1.13E-02 |
| 55 | GO:0015266: protein channel activity | 1.24E-02 |
| 56 | GO:0031072: heat shock protein binding | 1.24E-02 |
| 57 | GO:0051087: chaperone binding | 1.83E-02 |
| 58 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 1.95E-02 |
| 59 | GO:0004176: ATP-dependent peptidase activity | 1.95E-02 |
| 60 | GO:0010181: FMN binding | 2.92E-02 |
| 61 | GO:0008237: metallopeptidase activity | 3.86E-02 |
| 62 | GO:0003743: translation initiation factor activity | 4.62E-02 |
| 63 | GO:0046872: metal ion binding | 4.68E-02 |
| 64 | GO:0008236: serine-type peptidase activity | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0043186: P granule | 0.00E+00 |
| 3 | GO:0005840: ribosome | 1.17E-94 |
| 4 | GO:0022626: cytosolic ribosome | 1.99E-91 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 7.62E-81 |
| 6 | GO:0022627: cytosolic small ribosomal subunit | 1.60E-60 |
| 7 | GO:0005829: cytosol | 3.05E-36 |
| 8 | GO:0005730: nucleolus | 6.30E-32 |
| 9 | GO:0005737: cytoplasm | 1.42E-31 |
| 10 | GO:0009506: plasmodesma | 3.08E-21 |
| 11 | GO:0015934: large ribosomal subunit | 1.47E-18 |
| 12 | GO:0015935: small ribosomal subunit | 5.76E-13 |
| 13 | GO:0005774: vacuolar membrane | 6.94E-13 |
| 14 | GO:0016020: membrane | 2.16E-10 |
| 15 | GO:0005773: vacuole | 1.25E-08 |
| 16 | GO:0005618: cell wall | 4.84E-08 |
| 17 | GO:0009507: chloroplast | 8.21E-05 |
| 18 | GO:0030686: 90S preribosome | 3.22E-04 |
| 19 | GO:0005685: U1 snRNP | 4.95E-04 |
| 20 | GO:0015030: Cajal body | 5.85E-04 |
| 21 | GO:0005852: eukaryotic translation initiation factor 3 complex | 7.88E-04 |
| 22 | GO:0019013: viral nucleocapsid | 1.02E-03 |
| 23 | GO:0034719: SMN-Sm protein complex | 1.14E-03 |
| 24 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.14E-03 |
| 25 | GO:0005886: plasma membrane | 1.44E-03 |
| 26 | GO:0005758: mitochondrial intermembrane space | 1.57E-03 |
| 27 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 1.63E-03 |
| 28 | GO:0016593: Cdc73/Paf1 complex | 2.19E-03 |
| 29 | GO:0031897: Tic complex | 2.19E-03 |
| 30 | GO:0005682: U5 snRNP | 2.19E-03 |
| 31 | GO:0097526: spliceosomal tri-snRNP complex | 2.80E-03 |
| 32 | GO:0005687: U4 snRNP | 2.80E-03 |
| 33 | GO:0016282: eukaryotic 43S preinitiation complex | 3.46E-03 |
| 34 | GO:0031428: box C/D snoRNP complex | 3.46E-03 |
| 35 | GO:0033290: eukaryotic 48S preinitiation complex | 4.17E-03 |
| 36 | GO:0005689: U12-type spliceosomal complex | 4.17E-03 |
| 37 | GO:0005622: intracellular | 4.93E-03 |
| 38 | GO:0030529: intracellular ribonucleoprotein complex | 5.57E-03 |
| 39 | GO:0071004: U2-type prespliceosome | 5.71E-03 |
| 40 | GO:0005742: mitochondrial outer membrane translocase complex | 6.55E-03 |
| 41 | GO:0046930: pore complex | 6.55E-03 |
| 42 | GO:0005736: DNA-directed RNA polymerase I complex | 7.42E-03 |
| 43 | GO:0005743: mitochondrial inner membrane | 7.46E-03 |
| 44 | GO:0005666: DNA-directed RNA polymerase III complex | 8.34E-03 |
| 45 | GO:0071011: precatalytic spliceosome | 8.34E-03 |
| 46 | GO:0005686: U2 snRNP | 9.30E-03 |
| 47 | GO:0000418: DNA-directed RNA polymerase IV complex | 9.30E-03 |
| 48 | GO:0071013: catalytic step 2 spliceosome | 1.03E-02 |
| 49 | GO:0048471: perinuclear region of cytoplasm | 1.03E-02 |
| 50 | GO:0032040: small-subunit processome | 1.13E-02 |
| 51 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.13E-02 |
| 52 | GO:0000419: DNA-directed RNA polymerase V complex | 1.58E-02 |
| 53 | GO:0070469: respiratory chain | 1.83E-02 |
| 54 | GO:0005681: spliceosomal complex | 1.91E-02 |
| 55 | GO:0005741: mitochondrial outer membrane | 1.95E-02 |
| 56 | GO:0005834: heterotrimeric G-protein complex | 2.03E-02 |
| 57 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 2.35E-02 |
| 58 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.51E-02 |
| 59 | GO:0005759: mitochondrial matrix | 3.61E-02 |