co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G46910

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070328: triglyceride homeostasis	0.00E+00
2	GO:0006862: nucleotide transport	0.00E+00
3	GO:0055091: phospholipid homeostasis	0.00E+00
4	GO:2001142: nicotinate transport	0.00E+00
5	GO:0032497: detection of lipopolysaccharide	0.00E+00
6	GO:0002764: immune response-regulating signaling pathway	0.00E+00
7	GO:0042353: fucose biosynthetic process	0.00E+00
8	GO:0034775: glutathione transmembrane transport	0.00E+00
9	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
10	GO:0046967: cytosol to ER transport	0.00E+00
11	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
12	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
13	GO:2001143: N-methylnicotinate transport	0.00E+00
14	GO:0071289: cellular response to nickel ion	0.00E+00
15	GO:0010200: response to chitin	2.12E-14
16	GO:0002679: respiratory burst involved in defense response	4.19E-07
17	GO:0006468: protein phosphorylation	5.77E-07
18	GO:0009737: response to abscisic acid	6.78E-07
19	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	8.79E-06
20	GO:0006955: immune response	1.39E-05
21	GO:0042344: indole glucosinolate catabolic process	2.99E-05
22	GO:0016045: detection of bacterium	2.99E-05
23	GO:0010359: regulation of anion channel activity	2.99E-05
24	GO:0051865: protein autoubiquitination	4.01E-05
25	GO:2000280: regulation of root development	5.31E-05
26	GO:0052544: defense response by callose deposition in cell wall	8.61E-05
27	GO:0009611: response to wounding	8.93E-05
28	GO:0009823: cytokinin catabolic process	1.74E-04
29	GO:0009863: salicylic acid mediated signaling pathway	2.48E-04
30	GO:0010337: regulation of salicylic acid metabolic process	2.48E-04
31	GO:0006751: glutathione catabolic process	2.48E-04
32	GO:0009695: jasmonic acid biosynthetic process	2.84E-04
33	GO:0006952: defense response	3.87E-04
34	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	4.30E-04
35	GO:0051180: vitamin transport	4.43E-04
36	GO:0007229: integrin-mediated signaling pathway	4.43E-04
37	GO:0030974: thiamine pyrophosphate transport	4.43E-04
38	GO:0046938: phytochelatin biosynthetic process	4.43E-04
39	GO:0009865: pollen tube adhesion	4.43E-04
40	GO:0050691: regulation of defense response to virus by host	4.43E-04
41	GO:0006680: glucosylceramide catabolic process	4.43E-04
42	GO:0090421: embryonic meristem initiation	4.43E-04
43	GO:0006970: response to osmotic stress	4.53E-04
44	GO:0048544: recognition of pollen	6.78E-04
45	GO:0046777: protein autophosphorylation	6.92E-04
46	GO:0016567: protein ubiquitination	7.56E-04
47	GO:0055088: lipid homeostasis	9.56E-04
48	GO:0006741: NADP biosynthetic process	9.56E-04
49	GO:0006898: receptor-mediated endocytosis	9.56E-04
50	GO:0015893: drug transport	9.56E-04
51	GO:0052542: defense response by callose deposition	9.56E-04
52	GO:0010507: negative regulation of autophagy	9.56E-04
53	GO:0042754: negative regulation of circadian rhythm	9.56E-04
54	GO:0010289: homogalacturonan biosynthetic process	9.56E-04
55	GO:0009617: response to bacterium	1.05E-03
56	GO:0009620: response to fungus	1.33E-03
57	GO:0035556: intracellular signal transduction	1.38E-03
58	GO:0080168: abscisic acid transport	1.56E-03
59	GO:0048513: animal organ development	1.56E-03
60	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.56E-03
61	GO:0006598: polyamine catabolic process	1.56E-03
62	GO:0046786: viral replication complex formation and maintenance	1.56E-03
63	GO:0090630: activation of GTPase activity	1.56E-03
64	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	1.56E-03
65	GO:0019674: NAD metabolic process	1.56E-03
66	GO:0042742: defense response to bacterium	1.96E-03
67	GO:0006979: response to oxidative stress	2.00E-03
68	GO:0009969: xyloglucan biosynthetic process	2.03E-03
69	GO:0006811: ion transport	2.04E-03
70	GO:0009723: response to ethylene	2.16E-03
71	GO:0033014: tetrapyrrole biosynthetic process	2.25E-03
72	GO:0030100: regulation of endocytosis	2.25E-03
73	GO:0009399: nitrogen fixation	2.25E-03
74	GO:0015700: arsenite transport	2.25E-03
75	GO:0055089: fatty acid homeostasis	2.25E-03
76	GO:0019363: pyridine nucleotide biosynthetic process	2.25E-03
77	GO:0045087: innate immune response	2.43E-03
78	GO:0009652: thigmotropism	3.03E-03
79	GO:0006085: acetyl-CoA biosynthetic process	3.03E-03
80	GO:0045727: positive regulation of translation	3.03E-03
81	GO:0010107: potassium ion import	3.03E-03
82	GO:0045324: late endosome to vacuole transport	3.03E-03
83	GO:0034440: lipid oxidation	3.03E-03
84	GO:1902347: response to strigolactone	3.03E-03
85	GO:0046345: abscisic acid catabolic process	3.03E-03
86	GO:0031408: oxylipin biosynthetic process	3.05E-03
87	GO:0032957: inositol trisphosphate metabolic process	3.88E-03
88	GO:0006873: cellular ion homeostasis	3.88E-03
89	GO:0045487: gibberellin catabolic process	3.88E-03
90	GO:0006855: drug transmembrane transport	4.10E-03
91	GO:0006470: protein dephosphorylation	4.33E-03
92	GO:0047484: regulation of response to osmotic stress	4.80E-03
93	GO:1900425: negative regulation of defense response to bacterium	4.80E-03
94	GO:0006828: manganese ion transport	4.80E-03
95	GO:0015691: cadmium ion transport	4.80E-03
96	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	4.80E-03
97	GO:0010256: endomembrane system organization	4.80E-03
98	GO:1901001: negative regulation of response to salt stress	5.79E-03
99	GO:0009749: response to glucose	5.79E-03
100	GO:2000033: regulation of seed dormancy process	5.79E-03
101	GO:0098655: cation transmembrane transport	5.79E-03
102	GO:0010555: response to mannitol	5.79E-03
103	GO:0080086: stamen filament development	5.79E-03
104	GO:2000067: regulation of root morphogenesis	5.79E-03
105	GO:0009651: response to salt stress	6.11E-03
106	GO:0010193: response to ozone	6.19E-03
107	GO:0009626: plant-type hypersensitive response	6.62E-03
108	GO:0015937: coenzyme A biosynthetic process	6.85E-03
109	GO:1900057: positive regulation of leaf senescence	6.85E-03
110	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	6.85E-03
111	GO:0010161: red light signaling pathway	6.85E-03
112	GO:0019760: glucosinolate metabolic process	7.52E-03
113	GO:0009639: response to red or far red light	7.52E-03
114	GO:0007155: cell adhesion	7.97E-03
115	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	7.97E-03
116	GO:0009690: cytokinin metabolic process	7.97E-03
117	GO:1900150: regulation of defense response to fungus	7.97E-03
118	GO:0006875: cellular metal ion homeostasis	7.97E-03
119	GO:2000070: regulation of response to water deprivation	7.97E-03
120	GO:0045010: actin nucleation	7.97E-03
121	GO:0018105: peptidyl-serine phosphorylation	8.04E-03
122	GO:0009932: cell tip growth	9.15E-03
123	GO:0009880: embryonic pattern specification	9.15E-03
124	GO:0007186: G-protein coupled receptor signaling pathway	9.15E-03
125	GO:0048193: Golgi vesicle transport	9.15E-03
126	GO:0006997: nucleus organization	9.15E-03
127	GO:0010204: defense response signaling pathway, resistance gene-independent	9.15E-03
128	GO:0009699: phenylpropanoid biosynthetic process	9.15E-03
129	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.00E-02
130	GO:0098656: anion transmembrane transport	1.04E-02
131	GO:0046685: response to arsenic-containing substance	1.04E-02
132	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.04E-02
133	GO:0090333: regulation of stomatal closure	1.04E-02
134	GO:0006783: heme biosynthetic process	1.04E-02
135	GO:0001708: cell fate specification	1.04E-02
136	GO:0006779: porphyrin-containing compound biosynthetic process	1.17E-02
137	GO:0010018: far-red light signaling pathway	1.17E-02
138	GO:0009086: methionine biosynthetic process	1.17E-02
139	GO:0007346: regulation of mitotic cell cycle	1.17E-02
140	GO:0008219: cell death	1.18E-02
141	GO:0009738: abscisic acid-activated signaling pathway	1.24E-02
142	GO:0010629: negative regulation of gene expression	1.30E-02
143	GO:0055062: phosphate ion homeostasis	1.30E-02
144	GO:0006896: Golgi to vacuole transport	1.30E-02
145	GO:0006782: protoporphyrinogen IX biosynthetic process	1.30E-02
146	GO:0019538: protein metabolic process	1.30E-02
147	GO:0048829: root cap development	1.30E-02
148	GO:0006816: calcium ion transport	1.45E-02
149	GO:0009698: phenylpropanoid metabolic process	1.45E-02
150	GO:0009682: induced systemic resistance	1.45E-02
151	GO:0009750: response to fructose	1.45E-02
152	GO:0030148: sphingolipid biosynthetic process	1.45E-02
153	GO:0010015: root morphogenesis	1.45E-02
154	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.59E-02
155	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.59E-02
156	GO:0030001: metal ion transport	1.71E-02
157	GO:0006839: mitochondrial transport	1.71E-02
158	GO:0018107: peptidyl-threonine phosphorylation	1.74E-02
159	GO:0055046: microgametogenesis	1.74E-02
160	GO:0048364: root development	1.83E-02
161	GO:0048467: gynoecium development	1.90E-02
162	GO:0002237: response to molecule of bacterial origin	1.90E-02
163	GO:0009753: response to jasmonic acid	1.91E-02
164	GO:0051707: response to other organism	1.93E-02
165	GO:0009640: photomorphogenesis	1.93E-02
166	GO:0009901: anther dehiscence	2.06E-02
167	GO:0071732: cellular response to nitric oxide	2.06E-02
168	GO:0070588: calcium ion transmembrane transport	2.06E-02
169	GO:0042753: positive regulation of circadian rhythm	2.23E-02
170	GO:0010187: negative regulation of seed germination	2.40E-02
171	GO:2000377: regulation of reactive oxygen species metabolic process	2.40E-02
172	GO:0042538: hyperosmotic salinity response	2.43E-02
173	GO:0009873: ethylene-activated signaling pathway	2.51E-02
174	GO:0007165: signal transduction	2.70E-02
175	GO:0051321: meiotic cell cycle	2.75E-02
176	GO:0048278: vesicle docking	2.75E-02
177	GO:0016998: cell wall macromolecule catabolic process	2.75E-02
178	GO:0030245: cellulose catabolic process	2.93E-02
179	GO:0030433: ubiquitin-dependent ERAD pathway	2.93E-02
180	GO:0009686: gibberellin biosynthetic process	3.12E-02
181	GO:0071369: cellular response to ethylene stimulus	3.12E-02
182	GO:0040007: growth	3.12E-02
183	GO:0001944: vasculature development	3.12E-02
184	GO:0010584: pollen exine formation	3.31E-02
185	GO:0048443: stamen development	3.31E-02
186	GO:0019722: calcium-mediated signaling	3.31E-02
187	GO:0010089: xylem development	3.31E-02
188	GO:0010214: seed coat development	3.31E-02
189	GO:0006810: transport	3.32E-02
190	GO:0042147: retrograde transport, endosome to Golgi	3.51E-02
191	GO:0048653: anther development	3.71E-02
192	GO:0010118: stomatal movement	3.71E-02
193	GO:0016310: phosphorylation	3.75E-02
194	GO:0006520: cellular amino acid metabolic process	3.91E-02
195	GO:0048868: pollen tube development	3.91E-02
196	GO:0009555: pollen development	4.00E-02
197	GO:0061025: membrane fusion	4.12E-02
198	GO:0009414: response to water deprivation	4.14E-02
199	GO:0000398: mRNA splicing, via spliceosome	4.27E-02
200	GO:0006623: protein targeting to vacuole	4.33E-02
201	GO:0008654: phospholipid biosynthetic process	4.33E-02
202	GO:0055072: iron ion homeostasis	4.33E-02
203	GO:0002229: defense response to oomycetes	4.54E-02
204	GO:0006891: intra-Golgi vesicle-mediated transport	4.54E-02
205	GO:0009630: gravitropism	4.76E-02
206	GO:0045893: positive regulation of transcription, DNA-templated	4.87E-02
207	GO:0071281: cellular response to iron ion	4.98E-02
208	GO:1901657: glycosyl compound metabolic process	4.98E-02
209	GO:0006351: transcription, DNA-templated	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
2	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
3	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
4	GO:0004698: calcium-dependent protein kinase C activity	0.00E+00
5	GO:0017048: Rho GTPase binding	0.00E+00
6	GO:0005522: profilin binding	0.00E+00
7	GO:0042171: lysophosphatidic acid acyltransferase activity	0.00E+00
8	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
9	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
10	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
11	GO:0090416: nicotinate transporter activity	0.00E+00
12	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	4.19E-07
13	GO:0016301: kinase activity	5.00E-07
14	GO:0005524: ATP binding	3.84E-06
15	GO:0004674: protein serine/threonine kinase activity	2.51E-05
16	GO:0003840: gamma-glutamyltransferase activity	2.99E-05
17	GO:0036374: glutathione hydrolase activity	2.99E-05
18	GO:0008131: primary amine oxidase activity	1.55E-04
19	GO:0004842: ubiquitin-protein transferase activity	1.65E-04
20	GO:0019139: cytokinin dehydrogenase activity	1.74E-04
21	GO:0004143: diacylglycerol kinase activity	4.30E-04
22	GO:0090422: thiamine pyrophosphate transporter activity	4.43E-04
23	GO:0046870: cadmium ion binding	4.43E-04
24	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	4.43E-04
25	GO:0004348: glucosylceramidase activity	4.43E-04
26	GO:0071992: phytochelatin transmembrane transporter activity	4.43E-04
27	GO:0047150: betaine-homocysteine S-methyltransferase activity	4.43E-04
28	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	4.43E-04
29	GO:0090440: abscisic acid transporter activity	4.43E-04
30	GO:0042736: NADH kinase activity	4.43E-04
31	GO:0052894: norspermine:oxygen oxidoreductase activity	4.43E-04
32	GO:0003951: NAD+ kinase activity	6.55E-04
33	GO:0043565: sequence-specific DNA binding	6.98E-04
34	GO:0030246: carbohydrate binding	7.37E-04
35	GO:0016629: 12-oxophytodienoate reductase activity	9.56E-04
36	GO:0017022: myosin binding	9.56E-04
37	GO:0004103: choline kinase activity	9.56E-04
38	GO:0008883: glutamyl-tRNA reductase activity	9.56E-04
39	GO:0001047: core promoter binding	9.56E-04
40	GO:0003958: NADPH-hemoprotein reductase activity	9.56E-04
41	GO:0004594: pantothenate kinase activity	9.56E-04
42	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	9.56E-04
43	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	9.56E-04
44	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.11E-03
45	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	1.56E-03
46	GO:0004758: serine C-palmitoyltransferase activity	1.56E-03
47	GO:0031683: G-protein beta/gamma-subunit complex binding	1.56E-03
48	GO:0046423: allene-oxide cyclase activity	1.56E-03
49	GO:0004383: guanylate cyclase activity	1.56E-03
50	GO:0016165: linoleate 13S-lipoxygenase activity	1.56E-03
51	GO:0047325: inositol tetrakisphosphate 1-kinase activity	1.56E-03
52	GO:0001664: G-protein coupled receptor binding	1.56E-03
53	GO:0046592: polyamine oxidase activity	1.56E-03
54	GO:0019888: protein phosphatase regulator activity	1.61E-03
55	GO:0004672: protein kinase activity	1.77E-03
56	GO:0044212: transcription regulatory region DNA binding	1.96E-03
57	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.17E-03
58	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	2.25E-03
59	GO:0001653: peptide receptor activity	2.25E-03
60	GO:0033843: xyloglucan 6-xylosyltransferase activity	2.25E-03
61	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	2.25E-03
62	GO:0005215: transporter activity	2.49E-03
63	GO:0015369: calcium:proton antiporter activity	3.03E-03
64	GO:0043015: gamma-tubulin binding	3.03E-03
65	GO:0019199: transmembrane receptor protein kinase activity	3.03E-03
66	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	3.03E-03
67	GO:0004659: prenyltransferase activity	3.03E-03
68	GO:0015368: calcium:cation antiporter activity	3.03E-03
69	GO:0010294: abscisic acid glucosyltransferase activity	3.88E-03
70	GO:0004623: phospholipase A2 activity	3.88E-03
71	GO:0004356: glutamate-ammonia ligase activity	3.88E-03
72	GO:0004722: protein serine/threonine phosphatase activity	3.94E-03
73	GO:0019137: thioglucosidase activity	4.80E-03
74	GO:0010181: FMN binding	5.39E-03
75	GO:0019900: kinase binding	5.79E-03
76	GO:0051020: GTPase binding	5.79E-03
77	GO:0016621: cinnamoyl-CoA reductase activity	6.85E-03
78	GO:0008143: poly(A) binding	6.85E-03
79	GO:0015103: inorganic anion transmembrane transporter activity	6.85E-03
80	GO:0005516: calmodulin binding	9.11E-03
81	GO:0008308: voltage-gated anion channel activity	9.15E-03
82	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	9.15E-03
83	GO:0000989: transcription factor activity, transcription factor binding	1.04E-02
84	GO:0102483: scopolin beta-glucosidase activity	1.06E-02
85	GO:0004721: phosphoprotein phosphatase activity	1.06E-02
86	GO:0004683: calmodulin-dependent protein kinase activity	1.06E-02
87	GO:0047617: acyl-CoA hydrolase activity	1.17E-02
88	GO:0015238: drug transmembrane transporter activity	1.24E-02
89	GO:0005096: GTPase activator activity	1.24E-02
90	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	1.30E-02
91	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.42E-02
92	GO:0015297: antiporter activity	1.47E-02
93	GO:0008422: beta-glucosidase activity	1.63E-02
94	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.63E-02
95	GO:0005315: inorganic phosphate transmembrane transporter activity	1.74E-02
96	GO:0005262: calcium channel activity	1.74E-02
97	GO:0004857: enzyme inhibitor activity	2.40E-02
98	GO:0051087: chaperone binding	2.57E-02
99	GO:0016298: lipase activity	2.70E-02
100	GO:0004707: MAP kinase activity	2.75E-02
101	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.75E-02
102	GO:0008408: 3'-5' exonuclease activity	2.75E-02
103	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.84E-02
104	GO:0031625: ubiquitin protein ligase binding	2.89E-02
105	GO:0022891: substrate-specific transmembrane transporter activity	3.12E-02
106	GO:0050660: flavin adenine dinucleotide binding	3.24E-02
107	GO:0008514: organic anion transmembrane transporter activity	3.31E-02
108	GO:0003779: actin binding	3.60E-02
109	GO:0005515: protein binding	3.76E-02
110	GO:0046873: metal ion transmembrane transporter activity	3.91E-02
111	GO:0016853: isomerase activity	4.12E-02
112	GO:0050662: coenzyme binding	4.12E-02
113	GO:0051015: actin filament binding	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	9.81E-05
2	GO:0005911: cell-cell junction	4.43E-04
3	GO:0070382: exocytic vesicle	4.43E-04
4	GO:0019008: molybdopterin synthase complex	4.43E-04
5	GO:0016021: integral component of membrane	5.29E-04
6	GO:0030133: transport vesicle	9.56E-04
7	GO:0000159: protein phosphatase type 2A complex	1.24E-03
8	GO:0070062: extracellular exosome	2.25E-03
9	GO:0045177: apical part of cell	2.25E-03
10	GO:0031902: late endosome membrane	3.04E-03
11	GO:0005768: endosome	4.56E-03
12	GO:0031463: Cul3-RING ubiquitin ligase complex	4.80E-03
13	GO:0030140: trans-Golgi network transport vesicle	4.80E-03
14	GO:0005770: late endosome	5.01E-03
15	GO:0030173: integral component of Golgi membrane	5.79E-03
16	GO:0012505: endomembrane system	7.45E-03
17	GO:0010494: cytoplasmic stress granule	1.04E-02
18	GO:0016604: nuclear body	1.17E-02
19	GO:0005737: cytoplasm	1.70E-02
20	GO:0005938: cell cortex	1.74E-02
21	GO:0005634: nucleus	1.81E-02
22	GO:0090406: pollen tube	1.93E-02
23	GO:0009505: plant-type cell wall	2.48E-02
24	GO:0010008: endosome membrane	3.18E-02
25	GO:0005622: intracellular	3.48E-02
26	GO:0030136: clathrin-coated vesicle	3.51E-02
27	GO:0000145: exocyst	4.76E-02
28	GO:0005777: peroxisome	4.87E-02