co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G46800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046085: adenosine metabolic process	0.00E+00
2	GO:0009236: cobalamin biosynthetic process	0.00E+00
3	GO:0006044: N-acetylglucosamine metabolic process	0.00E+00
4	GO:0048870: cell motility	0.00E+00
5	GO:0032350: regulation of hormone metabolic process	0.00E+00
6	GO:0036172: thiamine salvage	0.00E+00
7	GO:0045930: negative regulation of mitotic cell cycle	0.00E+00
8	GO:0035674: tricarboxylic acid transmembrane transport	0.00E+00
9	GO:0009853: photorespiration	5.79E-05
10	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	1.06E-04
11	GO:1990542: mitochondrial transmembrane transport	2.11E-04
12	GO:0006835: dicarboxylic acid transport	2.11E-04
13	GO:0019354: siroheme biosynthetic process	2.11E-04
14	GO:0016031: tRNA import into mitochondrion	2.11E-04
15	GO:0031468: nuclear envelope reassembly	2.11E-04
16	GO:0006432: phenylalanyl-tRNA aminoacylation	4.71E-04
17	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	4.71E-04
18	GO:0019441: tryptophan catabolic process to kynurenine	4.71E-04
19	GO:0044419: interspecies interaction between organisms	4.71E-04
20	GO:0016560: protein import into peroxisome matrix, docking	4.71E-04
21	GO:0007163: establishment or maintenance of cell polarity	4.71E-04
22	GO:0010039: response to iron ion	7.14E-04
23	GO:0071492: cellular response to UV-A	7.67E-04
24	GO:0006760: folic acid-containing compound metabolic process	7.67E-04
25	GO:0010476: gibberellin mediated signaling pathway	7.67E-04
26	GO:0010325: raffinose family oligosaccharide biosynthetic process	7.67E-04
27	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	7.67E-04
28	GO:0006412: translation	9.74E-04
29	GO:0006241: CTP biosynthetic process	1.09E-03
30	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.09E-03
31	GO:0009399: nitrogen fixation	1.09E-03
32	GO:0006165: nucleoside diphosphate phosphorylation	1.09E-03
33	GO:0006228: UTP biosynthetic process	1.09E-03
34	GO:0009647: skotomorphogenesis	1.09E-03
35	GO:0009963: positive regulation of flavonoid biosynthetic process	1.09E-03
36	GO:0016226: iron-sulfur cluster assembly	1.15E-03
37	GO:0006012: galactose metabolic process	1.25E-03
38	GO:0042254: ribosome biogenesis	1.34E-03
39	GO:0044205: 'de novo' UMP biosynthetic process	1.45E-03
40	GO:0009956: radial pattern formation	1.45E-03
41	GO:0009165: nucleotide biosynthetic process	1.45E-03
42	GO:0006542: glutamine biosynthetic process	1.45E-03
43	GO:0071486: cellular response to high light intensity	1.45E-03
44	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.45E-03
45	GO:0009765: photosynthesis, light harvesting	1.45E-03
46	GO:0006183: GTP biosynthetic process	1.45E-03
47	GO:0006221: pyrimidine nucleotide biosynthetic process	1.45E-03
48	GO:0006625: protein targeting to peroxisome	1.45E-03
49	GO:0009649: entrainment of circadian clock	1.45E-03
50	GO:0008295: spermidine biosynthetic process	1.45E-03
51	GO:0006749: glutathione metabolic process	1.45E-03
52	GO:0046283: anthocyanin-containing compound metabolic process	1.85E-03
53	GO:0009229: thiamine diphosphate biosynthetic process	1.85E-03
54	GO:0030041: actin filament polymerization	1.85E-03
55	GO:0009117: nucleotide metabolic process	2.28E-03
56	GO:0006574: valine catabolic process	2.28E-03
57	GO:0009228: thiamine biosynthetic process	2.28E-03
58	GO:0033365: protein localization to organelle	2.28E-03
59	GO:0010090: trichome morphogenesis	2.39E-03
60	GO:0048444: floral organ morphogenesis	2.74E-03
61	GO:0000054: ribosomal subunit export from nucleus	2.74E-03
62	GO:0022904: respiratory electron transport chain	3.23E-03
63	GO:0006826: iron ion transport	3.23E-03
64	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	3.23E-03
65	GO:0009704: de-etiolation	3.74E-03
66	GO:0000028: ribosomal small subunit assembly	3.74E-03
67	GO:0045010: actin nucleation	3.74E-03
68	GO:0006526: arginine biosynthetic process	4.29E-03
69	GO:0032544: plastid translation	4.29E-03
70	GO:0009056: catabolic process	4.85E-03
71	GO:0000902: cell morphogenesis	4.85E-03
72	GO:0098656: anion transmembrane transport	4.85E-03
73	GO:0009245: lipid A biosynthetic process	4.85E-03
74	GO:0008356: asymmetric cell division	5.44E-03
75	GO:1900865: chloroplast RNA modification	5.44E-03
76	GO:0010267: production of ta-siRNAs involved in RNA interference	5.44E-03
77	GO:0006839: mitochondrial transport	5.68E-03
78	GO:0009641: shade avoidance	6.06E-03
79	GO:0052544: defense response by callose deposition in cell wall	6.69E-03
80	GO:0072593: reactive oxygen species metabolic process	6.69E-03
81	GO:0006979: response to oxidative stress	6.75E-03
82	GO:0016925: protein sumoylation	7.36E-03
83	GO:0006006: glucose metabolic process	8.04E-03
84	GO:0050826: response to freezing	8.04E-03
85	GO:0006094: gluconeogenesis	8.04E-03
86	GO:0010020: chloroplast fission	8.75E-03
87	GO:0010224: response to UV-B	8.97E-03
88	GO:0007031: peroxisome organization	9.48E-03
89	GO:0007030: Golgi organization	9.48E-03
90	GO:0019853: L-ascorbic acid biosynthetic process	9.48E-03
91	GO:0034976: response to endoplasmic reticulum stress	1.02E-02
92	GO:0006406: mRNA export from nucleus	1.10E-02
93	GO:0006289: nucleotide-excision repair	1.10E-02
94	GO:0009116: nucleoside metabolic process	1.10E-02
95	GO:0016569: covalent chromatin modification	1.16E-02
96	GO:0015992: proton transport	1.26E-02
97	GO:0010431: seed maturation	1.26E-02
98	GO:0007005: mitochondrion organization	1.34E-02
99	GO:0009693: ethylene biosynthetic process	1.43E-02
100	GO:0009408: response to heat	1.46E-02
101	GO:0080022: primary root development	1.70E-02
102	GO:0000413: protein peptidyl-prolyl isomerization	1.70E-02
103	GO:0006606: protein import into nucleus	1.70E-02
104	GO:0015991: ATP hydrolysis coupled proton transport	1.70E-02
105	GO:0006520: cellular amino acid metabolic process	1.79E-02
106	GO:0061025: membrane fusion	1.88E-02
107	GO:0055072: iron ion homeostasis	1.98E-02
108	GO:0031047: gene silencing by RNA	2.18E-02
109	GO:0042742: defense response to bacterium	2.25E-02
110	GO:1901657: glycosyl compound metabolic process	2.28E-02
111	GO:0010286: heat acclimation	2.49E-02
112	GO:0016126: sterol biosynthetic process	2.70E-02
113	GO:0042128: nitrate assimilation	2.92E-02
114	GO:0006974: cellular response to DNA damage stimulus	2.92E-02
115	GO:0048573: photoperiodism, flowering	3.04E-02
116	GO:0006888: ER to Golgi vesicle-mediated transport	3.04E-02
117	GO:0015031: protein transport	3.21E-02
118	GO:0009407: toxin catabolic process	3.50E-02
119	GO:0010119: regulation of stomatal movement	3.62E-02
120	GO:0006810: transport	3.95E-02
121	GO:0006457: protein folding	4.12E-02
122	GO:0009926: auxin polar transport	4.63E-02
123	GO:0009640: photomorphogenesis	4.63E-02
124	GO:0045454: cell redox homeostasis	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0016852: sirohydrochlorin cobaltochelatase activity	0.00E+00
2	GO:0004417: hydroxyethylthiazole kinase activity	0.00E+00
3	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
4	GO:0015142: tricarboxylic acid transmembrane transporter activity	0.00E+00
5	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
6	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
7	GO:0004343: glucosamine 6-phosphate N-acetyltransferase activity	0.00E+00
8	GO:0051266: sirohydrochlorin ferrochelatase activity	0.00E+00
9	GO:0003992: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity	0.00E+00
10	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
11	GO:0004151: dihydroorotase activity	0.00E+00
12	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
13	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
14	GO:0017077: oxidative phosphorylation uncoupler activity	1.76E-05
15	GO:0003735: structural constituent of ribosome	4.68E-05
16	GO:0004034: aldose 1-epimerase activity	1.78E-04
17	GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity	2.11E-04
18	GO:0080048: GDP-D-glucose phosphorylase activity	2.11E-04
19	GO:0046480: galactolipid galactosyltransferase activity	2.11E-04
20	GO:0080079: cellobiose glucosidase activity	2.11E-04
21	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	2.11E-04
22	GO:0080047: GDP-L-galactose phosphorylase activity	2.11E-04
23	GO:0010331: gibberellin binding	4.71E-04
24	GO:0004766: spermidine synthase activity	4.71E-04
25	GO:0004826: phenylalanine-tRNA ligase activity	4.71E-04
26	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	4.71E-04
27	GO:1990585: hydroxyproline O-arabinosyltransferase activity	4.71E-04
28	GO:0004061: arylformamidase activity	4.71E-04
29	GO:0032403: protein complex binding	7.67E-04
30	GO:0008649: rRNA methyltransferase activity	7.67E-04
31	GO:0017176: phosphatidylinositol N-acetylglucosaminyltransferase activity	7.67E-04
32	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	7.67E-04
33	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	7.67E-04
34	GO:0005310: dicarboxylic acid transmembrane transporter activity	7.67E-04
35	GO:0004848: ureidoglycolate hydrolase activity	7.67E-04
36	GO:0042802: identical protein binding	9.69E-04
37	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.09E-03
38	GO:0004550: nucleoside diphosphate kinase activity	1.09E-03
39	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.09E-03
40	GO:0004749: ribose phosphate diphosphokinase activity	1.09E-03
41	GO:0000254: C-4 methylsterol oxidase activity	1.09E-03
42	GO:0035529: NADH pyrophosphatase activity	1.09E-03
43	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.45E-03
44	GO:0005319: lipid transporter activity	1.45E-03
45	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	1.45E-03
46	GO:0008080: N-acetyltransferase activity	1.71E-03
47	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.85E-03
48	GO:0005496: steroid binding	1.85E-03
49	GO:0031386: protein tag	1.85E-03
50	GO:0004356: glutamate-ammonia ligase activity	1.85E-03
51	GO:0080046: quercetin 4'-O-glucosyltransferase activity	2.28E-03
52	GO:0031177: phosphopantetheine binding	2.28E-03
53	GO:0051117: ATPase binding	2.28E-03
54	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	2.28E-03
55	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.74E-03
56	GO:0000035: acyl binding	2.74E-03
57	GO:0008143: poly(A) binding	3.23E-03
58	GO:0005085: guanyl-nucleotide exchange factor activity	3.23E-03
59	GO:0008375: acetylglucosaminyltransferase activity	3.38E-03
60	GO:0035064: methylated histone binding	3.74E-03
61	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	3.74E-03
62	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	3.74E-03
63	GO:0001055: RNA polymerase II activity	5.44E-03
64	GO:0008047: enzyme activator activity	6.06E-03
65	GO:0051537: 2 iron, 2 sulfur cluster binding	6.95E-03
66	GO:0043621: protein self-association	6.95E-03
67	GO:0008378: galactosyltransferase activity	7.36E-03
68	GO:0000049: tRNA binding	7.36E-03
69	GO:0051287: NAD binding	7.79E-03
70	GO:0005315: inorganic phosphate transmembrane transporter activity	8.04E-03
71	GO:0004089: carbonate dehydratase activity	8.04E-03
72	GO:0015266: protein channel activity	8.04E-03
73	GO:0005515: protein binding	8.55E-03
74	GO:0051536: iron-sulfur cluster binding	1.10E-02
75	GO:0043130: ubiquitin binding	1.10E-02
76	GO:0022857: transmembrane transporter activity	1.16E-02
77	GO:0004298: threonine-type endopeptidase activity	1.26E-02
78	GO:0008514: organic anion transmembrane transporter activity	1.52E-02
79	GO:0003756: protein disulfide isomerase activity	1.52E-02
80	GO:0005102: receptor binding	1.61E-02
81	GO:0030170: pyridoxal phosphate binding	1.72E-02
82	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.79E-02
83	GO:0003723: RNA binding	1.80E-02
84	GO:0015144: carbohydrate transmembrane transporter activity	1.86E-02
85	GO:0016853: isomerase activity	1.88E-02
86	GO:0048038: quinone binding	2.08E-02
87	GO:0008137: NADH dehydrogenase (ubiquinone) activity	2.08E-02
88	GO:0005351: sugar:proton symporter activity	2.10E-02
89	GO:0016787: hydrolase activity	2.47E-02
90	GO:0008483: transaminase activity	2.49E-02
91	GO:0003824: catalytic activity	2.59E-02
92	GO:0016597: amino acid binding	2.59E-02
93	GO:0016168: chlorophyll binding	2.81E-02
94	GO:0000166: nucleotide binding	2.99E-02
95	GO:0008236: serine-type peptidase activity	3.15E-02
96	GO:0008168: methyltransferase activity	3.20E-02
97	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.27E-02
98	GO:0050897: cobalt ion binding	3.62E-02
99	GO:0008422: beta-glucosidase activity	4.11E-02
100	GO:0050661: NADP binding	4.24E-02
101	GO:0051539: 4 iron, 4 sulfur cluster binding	4.24E-02
102	GO:0004364: glutathione transferase activity	4.50E-02
103	GO:0005507: copper ion binding	4.62E-02
104	GO:0004185: serine-type carboxypeptidase activity	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0016469: proton-transporting two-sector ATPase complex	0.00E+00
2	GO:0005675: holo TFIIH complex	0.00E+00
3	GO:0097361: CIA complex	0.00E+00
4	GO:0055037: recycling endosome	0.00E+00
5	GO:0005829: cytosol	3.10E-07
6	GO:0005747: mitochondrial respiratory chain complex I	1.07E-06
7	GO:0045271: respiratory chain complex I	1.64E-06
8	GO:0005840: ribosome	3.53E-06
9	GO:0031966: mitochondrial membrane	1.40E-04
10	GO:0000152: nuclear ubiquitin ligase complex	2.11E-04
11	GO:0043190: ATP-binding cassette (ABC) transporter complex	2.11E-04
12	GO:1990429: peroxisomal importomer complex	2.11E-04
13	GO:0022625: cytosolic large ribosomal subunit	3.86E-04
14	GO:0009507: chloroplast	5.35E-04
15	GO:0009941: chloroplast envelope	7.32E-04
16	GO:0000439: core TFIIH complex	7.67E-04
17	GO:0009536: plastid	8.10E-04
18	GO:1990726: Lsm1-7-Pat1 complex	1.09E-03
19	GO:0016471: vacuolar proton-transporting V-type ATPase complex	1.45E-03
20	GO:0000445: THO complex part of transcription export complex	1.45E-03
21	GO:0022626: cytosolic ribosome	1.79E-03
22	GO:0016591: DNA-directed RNA polymerase II, holoenzyme	1.85E-03
23	GO:0009706: chloroplast inner membrane	1.93E-03
24	GO:0032588: trans-Golgi network membrane	2.28E-03
25	GO:0031209: SCAR complex	2.28E-03
26	GO:0005778: peroxisomal membrane	2.70E-03
27	GO:0005801: cis-Golgi network	2.74E-03
28	GO:0005743: mitochondrial inner membrane	2.92E-03
29	GO:0031359: integral component of chloroplast outer membrane	3.23E-03
30	GO:0000347: THO complex	3.23E-03
31	GO:0005688: U6 snRNP	3.74E-03
32	GO:0009707: chloroplast outer membrane	3.94E-03
33	GO:0019773: proteasome core complex, alpha-subunit complex	4.29E-03
34	GO:0046540: U4/U6 x U5 tri-snRNP complex	4.29E-03
35	GO:0005763: mitochondrial small ribosomal subunit	4.85E-03
36	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.85E-03
37	GO:0071011: precatalytic spliceosome	5.44E-03
38	GO:0016604: nuclear body	5.44E-03
39	GO:0000418: DNA-directed RNA polymerase IV complex	6.06E-03
40	GO:0071013: catalytic step 2 spliceosome	6.69E-03
41	GO:0005856: cytoskeleton	7.22E-03
42	GO:0005665: DNA-directed RNA polymerase II, core complex	7.36E-03
43	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	7.58E-03
44	GO:0005774: vacuolar membrane	7.73E-03
45	GO:0005764: lysosome	8.75E-03
46	GO:0000419: DNA-directed RNA polymerase V complex	1.02E-02
47	GO:0005769: early endosome	1.02E-02
48	GO:0005737: cytoplasm	1.06E-02
49	GO:0016607: nuclear speck	1.06E-02
50	GO:0005758: mitochondrial intermembrane space	1.10E-02
51	GO:0070469: respiratory chain	1.18E-02
52	GO:0005739: mitochondrion	1.19E-02
53	GO:0005839: proteasome core complex	1.26E-02
54	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.52E-02
55	GO:0005730: nucleolus	1.65E-02
56	GO:0005770: late endosome	1.79E-02
57	GO:0005773: vacuole	1.91E-02
58	GO:0009523: photosystem II	1.98E-02
59	GO:0071944: cell periphery	2.28E-02
60	GO:0005794: Golgi apparatus	2.66E-02
61	GO:0009535: chloroplast thylakoid membrane	2.66E-02
62	GO:0000932: P-body	2.70E-02
63	GO:0000325: plant-type vacuole	3.62E-02
64	GO:0016020: membrane	3.82E-02
65	GO:0005789: endoplasmic reticulum membrane	4.18E-02