co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G46710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007141: male meiosis I	0.00E+00
2	GO:0009667: plastid inner membrane organization	0.00E+00
3	GO:1904526: regulation of microtubule binding	0.00E+00
4	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
5	GO:0009737: response to abscisic acid	6.52E-12
6	GO:0009409: response to cold	4.66E-10
7	GO:0009631: cold acclimation	9.15E-10
8	GO:0009415: response to water	1.68E-08
9	GO:0009414: response to water deprivation	1.07E-07
10	GO:0010200: response to chitin	1.89E-07
11	GO:0006970: response to osmotic stress	1.60E-06
12	GO:0009611: response to wounding	6.85E-06
13	GO:0009873: ethylene-activated signaling pathway	2.05E-05
14	GO:0006811: ion transport	3.05E-05
15	GO:0009269: response to desiccation	5.17E-05
16	GO:0035435: phosphate ion transmembrane transport	6.12E-05
17	GO:0050832: defense response to fungus	9.63E-05
18	GO:0042538: hyperosmotic salinity response	9.94E-05
19	GO:2000070: regulation of response to water deprivation	1.45E-04
20	GO:0034472: snRNA 3'-end processing	1.84E-04
21	GO:0009609: response to symbiotic bacterium	1.84E-04
22	GO:0051180: vitamin transport	1.84E-04
23	GO:0030974: thiamine pyrophosphate transport	1.84E-04
24	GO:0050691: regulation of defense response to virus by host	1.84E-04
25	GO:0006680: glucosylceramide catabolic process	1.84E-04
26	GO:2000280: regulation of root development	2.64E-04
27	GO:0010507: negative regulation of autophagy	4.15E-04
28	GO:0015709: thiosulfate transport	4.15E-04
29	GO:0071422: succinate transmembrane transport	4.15E-04
30	GO:0031407: oxylipin metabolic process	4.15E-04
31	GO:0010289: homogalacturonan biosynthetic process	4.15E-04
32	GO:0015893: drug transport	4.15E-04
33	GO:0015786: UDP-glucose transport	4.15E-04
34	GO:1901679: nucleotide transmembrane transport	4.15E-04
35	GO:0050826: response to freezing	4.70E-04
36	GO:0010150: leaf senescence	5.03E-04
37	GO:0006839: mitochondrial transport	5.77E-04
38	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	6.76E-04
39	GO:0015783: GDP-fucose transport	6.76E-04
40	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	6.76E-04
41	GO:0046168: glycerol-3-phosphate catabolic process	6.76E-04
42	GO:0006598: polyamine catabolic process	6.76E-04
43	GO:0080121: AMP transport	6.76E-04
44	GO:0080168: abscisic acid transport	6.76E-04
45	GO:0042344: indole glucosinolate catabolic process	6.76E-04
46	GO:0009413: response to flooding	9.65E-04
47	GO:0051259: protein oligomerization	9.65E-04
48	GO:0010371: regulation of gibberellin biosynthetic process	9.65E-04
49	GO:0015729: oxaloacetate transport	9.65E-04
50	GO:0072334: UDP-galactose transmembrane transport	9.65E-04
51	GO:0006072: glycerol-3-phosphate metabolic process	9.65E-04
52	GO:0015696: ammonium transport	9.65E-04
53	GO:0072488: ammonium transmembrane transport	1.28E-03
54	GO:0006552: leucine catabolic process	1.28E-03
55	GO:0015867: ATP transport	1.28E-03
56	GO:0048868: pollen tube development	1.41E-03
57	GO:0009651: response to salt stress	1.57E-03
58	GO:0051225: spindle assembly	1.63E-03
59	GO:0009247: glycolipid biosynthetic process	1.63E-03
60	GO:0071423: malate transmembrane transport	1.63E-03
61	GO:0045487: gibberellin catabolic process	1.63E-03
62	GO:0009749: response to glucose	1.63E-03
63	GO:0006873: cellular ion homeostasis	1.63E-03
64	GO:0015866: ADP transport	2.01E-03
65	GO:0048232: male gamete generation	2.01E-03
66	GO:0006796: phosphate-containing compound metabolic process	2.01E-03
67	GO:1900425: negative regulation of defense response to bacterium	2.01E-03
68	GO:0006574: valine catabolic process	2.01E-03
69	GO:0019760: glucosinolate metabolic process	2.10E-03
70	GO:0010286: heat acclimation	2.23E-03
71	GO:0009751: response to salicylic acid	2.38E-03
72	GO:0010555: response to mannitol	2.41E-03
73	GO:0045926: negative regulation of growth	2.41E-03
74	GO:0009082: branched-chain amino acid biosynthetic process	2.41E-03
75	GO:0098655: cation transmembrane transport	2.41E-03
76	GO:0006633: fatty acid biosynthetic process	2.69E-03
77	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.83E-03
78	GO:0006401: RNA catabolic process	2.83E-03
79	GO:0008272: sulfate transport	2.83E-03
80	GO:1902074: response to salt	2.83E-03
81	GO:0007155: cell adhesion	3.28E-03
82	GO:0009819: drought recovery	3.28E-03
83	GO:0019375: galactolipid biosynthetic process	3.28E-03
84	GO:0050821: protein stabilization	3.28E-03
85	GO:0006470: protein dephosphorylation	3.59E-03
86	GO:0010345: suberin biosynthetic process	4.25E-03
87	GO:0098656: anion transmembrane transport	4.25E-03
88	GO:0051865: protein autoubiquitination	4.25E-03
89	GO:0051707: response to other organism	5.30E-03
90	GO:0051026: chiasma assembly	5.30E-03
91	GO:0055062: phosphate ion homeostasis	5.30E-03
92	GO:0009644: response to high light intensity	5.73E-03
93	GO:0010015: root morphogenesis	5.85E-03
94	GO:0000038: very long-chain fatty acid metabolic process	5.85E-03
95	GO:0009682: induced systemic resistance	5.85E-03
96	GO:0052544: defense response by callose deposition in cell wall	5.85E-03
97	GO:0045037: protein import into chloroplast stroma	6.43E-03
98	GO:0010105: negative regulation of ethylene-activated signaling pathway	6.43E-03
99	GO:0018107: peptidyl-threonine phosphorylation	7.03E-03
100	GO:0002237: response to molecule of bacterial origin	7.64E-03
101	GO:0070588: calcium ion transmembrane transport	8.27E-03
102	GO:0055085: transmembrane transport	8.34E-03
103	GO:0009833: plant-type primary cell wall biogenesis	8.93E-03
104	GO:0030150: protein import into mitochondrial matrix	9.60E-03
105	GO:0005975: carbohydrate metabolic process	9.79E-03
106	GO:0009624: response to nematode	1.02E-02
107	GO:0007017: microtubule-based process	1.03E-02
108	GO:0009695: jasmonic acid biosynthetic process	1.03E-02
109	GO:0051260: protein homooligomerization	1.10E-02
110	GO:0031408: oxylipin biosynthetic process	1.10E-02
111	GO:0010017: red or far-red light signaling pathway	1.17E-02
112	GO:0007131: reciprocal meiotic recombination	1.17E-02
113	GO:0009686: gibberellin biosynthetic process	1.25E-02
114	GO:0070417: cellular response to cold	1.40E-02
115	GO:0042631: cellular response to water deprivation	1.48E-02
116	GO:0042335: cuticle development	1.48E-02
117	GO:0006814: sodium ion transport	1.64E-02
118	GO:0007623: circadian rhythm	1.76E-02
119	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.81E-02
120	GO:0000302: response to reactive oxygen species	1.81E-02
121	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.98E-02
122	GO:0009639: response to red or far red light	2.07E-02
123	GO:0006310: DNA recombination	2.07E-02
124	GO:0009617: response to bacterium	2.11E-02
125	GO:0009416: response to light stimulus	2.35E-02
126	GO:0009911: positive regulation of flower development	2.35E-02
127	GO:0009555: pollen development	2.35E-02
128	GO:0010027: thylakoid membrane organization	2.35E-02
129	GO:0006351: transcription, DNA-templated	2.42E-02
130	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.45E-02
131	GO:0010029: regulation of seed germination	2.45E-02
132	GO:0006950: response to stress	2.64E-02
133	GO:0006355: regulation of transcription, DNA-templated	2.66E-02
134	GO:0016049: cell growth	2.74E-02
135	GO:0009817: defense response to fungus, incompatible interaction	2.84E-02
136	GO:0006457: protein folding	3.24E-02
137	GO:0009637: response to blue light	3.36E-02
138	GO:0006631: fatty acid metabolic process	3.80E-02
139	GO:0009744: response to sucrose	4.03E-02
140	GO:0045892: negative regulation of transcription, DNA-templated	4.11E-02
141	GO:0000209: protein polyubiquitination	4.14E-02
142	GO:0042546: cell wall biogenesis	4.14E-02
143	GO:0008643: carbohydrate transport	4.26E-02
144	GO:0006855: drug transmembrane transport	4.50E-02
145	GO:0031347: regulation of defense response	4.61E-02
146	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.61E-02
147	GO:0006260: DNA replication	4.61E-02
148	GO:0006812: cation transport	4.73E-02
149	GO:0006629: lipid metabolic process	4.97E-02
150	GO:0006364: rRNA processing	4.98E-02
151	GO:0006813: potassium ion transport	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0005534: galactose binding	0.00E+00
2	GO:0009922: fatty acid elongase activity	2.72E-07
3	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	3.20E-05
4	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	3.20E-05
5	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	3.20E-05
6	GO:0015297: antiporter activity	5.70E-05
7	GO:0052894: norspermine:oxygen oxidoreductase activity	1.84E-04
8	GO:0090422: thiamine pyrophosphate transporter activity	1.84E-04
9	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	1.84E-04
10	GO:0090440: abscisic acid transporter activity	1.84E-04
11	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.84E-04
12	GO:0004348: glucosylceramidase activity	1.84E-04
13	GO:0001047: core promoter binding	4.15E-04
14	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	4.15E-04
15	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	4.15E-04
16	GO:0015117: thiosulfate transmembrane transporter activity	4.15E-04
17	GO:1901677: phosphate transmembrane transporter activity	4.15E-04
18	GO:0016629: 12-oxophytodienoate reductase activity	4.15E-04
19	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	6.76E-04
20	GO:0005457: GDP-fucose transmembrane transporter activity	6.76E-04
21	GO:0046592: polyamine oxidase activity	6.76E-04
22	GO:0005310: dicarboxylic acid transmembrane transporter activity	6.76E-04
23	GO:0015141: succinate transmembrane transporter activity	6.76E-04
24	GO:0046423: allene-oxide cyclase activity	6.76E-04
25	GO:0052654: L-leucine transaminase activity	9.65E-04
26	GO:0052655: L-valine transaminase activity	9.65E-04
27	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	9.65E-04
28	GO:0005432: calcium:sodium antiporter activity	9.65E-04
29	GO:0004715: non-membrane spanning protein tyrosine kinase activity	9.65E-04
30	GO:0015131: oxaloacetate transmembrane transporter activity	9.65E-04
31	GO:0035250: UDP-galactosyltransferase activity	9.65E-04
32	GO:0003883: CTP synthase activity	9.65E-04
33	GO:0005460: UDP-glucose transmembrane transporter activity	9.65E-04
34	GO:0052656: L-isoleucine transaminase activity	9.65E-04
35	GO:0044212: transcription regulatory region DNA binding	1.27E-03
36	GO:0004084: branched-chain-amino-acid transaminase activity	1.28E-03
37	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.63E-03
38	GO:0051011: microtubule minus-end binding	1.63E-03
39	GO:0005459: UDP-galactose transmembrane transporter activity	1.63E-03
40	GO:0080122: AMP transmembrane transporter activity	1.63E-03
41	GO:0008519: ammonium transmembrane transporter activity	2.01E-03
42	GO:0019137: thioglucosidase activity	2.01E-03
43	GO:0015217: ADP transmembrane transporter activity	2.41E-03
44	GO:0005347: ATP transmembrane transporter activity	2.41E-03
45	GO:0004427: inorganic diphosphatase activity	2.83E-03
46	GO:0015140: malate transmembrane transporter activity	2.83E-03
47	GO:0015288: porin activity	3.28E-03
48	GO:0015491: cation:cation antiporter activity	3.28E-03
49	GO:0008308: voltage-gated anion channel activity	3.75E-03
50	GO:0004713: protein tyrosine kinase activity	5.30E-03
51	GO:0015116: sulfate transmembrane transporter activity	6.43E-03
52	GO:0005262: calcium channel activity	7.03E-03
53	GO:0015114: phosphate ion transmembrane transporter activity	7.03E-03
54	GO:0000175: 3'-5'-exoribonuclease activity	7.03E-03
55	GO:0015266: protein channel activity	7.03E-03
56	GO:0008131: primary amine oxidase activity	7.64E-03
57	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.64E-03
58	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	8.84E-03
59	GO:0022857: transmembrane transporter activity	9.58E-03
60	GO:0004722: protein serine/threonine phosphatase activity	9.79E-03
61	GO:0051087: chaperone binding	1.03E-02
62	GO:0004540: ribonuclease activity	1.10E-02
63	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.16E-02
64	GO:0043565: sequence-specific DNA binding	1.17E-02
65	GO:0018024: histone-lysine N-methyltransferase activity	1.40E-02
66	GO:0010181: FMN binding	1.64E-02
67	GO:0019901: protein kinase binding	1.73E-02
68	GO:0005200: structural constituent of cytoskeleton	2.17E-02
69	GO:0046872: metal ion binding	2.55E-02
70	GO:0102483: scopolin beta-glucosidase activity	2.64E-02
71	GO:0004806: triglyceride lipase activity	2.64E-02
72	GO:0004721: phosphoprotein phosphatase activity	2.64E-02
73	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.74E-02
74	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.84E-02
75	GO:0005096: GTPase activator activity	2.94E-02
76	GO:0015238: drug transmembrane transporter activity	2.94E-02
77	GO:0061630: ubiquitin protein ligase activity	3.56E-02
78	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.58E-02
79	GO:0003677: DNA binding	3.58E-02
80	GO:0008422: beta-glucosidase activity	3.58E-02
81	GO:0051287: NAD binding	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0032039: integrator complex	0.00E+00
2	GO:0034426: etioplast membrane	0.00E+00
3	GO:0031357: integral component of chloroplast inner membrane	4.15E-04
4	GO:0005743: mitochondrial inner membrane	4.41E-04
5	GO:0070652: HAUS complex	6.76E-04
6	GO:0009331: glycerol-3-phosphate dehydrogenase complex	9.65E-04
7	GO:0009527: plastid outer membrane	1.28E-03
8	GO:0000178: exosome (RNase complex)	1.63E-03
9	GO:0031305: integral component of mitochondrial inner membrane	3.28E-03
10	GO:0009941: chloroplast envelope	3.52E-03
11	GO:0046930: pore complex	3.75E-03
12	GO:0045298: tubulin complex	4.25E-03
13	GO:0016604: nuclear body	4.76E-03
14	GO:0005876: spindle microtubule	4.76E-03
15	GO:0015629: actin cytoskeleton	1.25E-02
16	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.32E-02
17	GO:0000790: nuclear chromatin	1.40E-02
18	GO:0005770: late endosome	1.56E-02
19	GO:0005694: chromosome	1.90E-02
20	GO:0010319: stromule	2.17E-02
21	GO:0046658: anchored component of plasma membrane	2.34E-02
22	GO:0000932: P-body	2.35E-02
23	GO:0005829: cytosol	2.82E-02
24	GO:0009707: chloroplast outer membrane	2.84E-02
25	GO:0031902: late endosome membrane	3.80E-02
26	GO:0016020: membrane	3.89E-02
27	GO:0031225: anchored component of membrane	4.08E-02