Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G46330

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000630: positive regulation of miRNA metabolic process0.00E+00
2GO:0070328: triglyceride homeostasis0.00E+00
3GO:0055091: phospholipid homeostasis0.00E+00
4GO:0034775: glutathione transmembrane transport0.00E+00
5GO:0071475: cellular hyperosmotic salinity response0.00E+00
6GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
7GO:2000636: positive regulation of primary miRNA processing0.00E+00
8GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
9GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process0.00E+00
10GO:0019593: mannitol biosynthetic process0.00E+00
11GO:0010200: response to chitin5.84E-09
12GO:0009873: ethylene-activated signaling pathway1.39E-07
13GO:0015700: arsenite transport4.86E-05
14GO:0006351: transcription, DNA-templated1.48E-04
15GO:0035435: phosphate ion transmembrane transport1.92E-04
16GO:0006751: glutathione catabolic process1.92E-04
17GO:0009611: response to wounding1.93E-04
18GO:0006811: ion transport2.03E-04
19GO:0006355: regulation of transcription, DNA-templated2.70E-04
20GO:0006955: immune response3.37E-04
21GO:0009609: response to symbiotic bacterium3.75E-04
22GO:1902265: abscisic acid homeostasis3.75E-04
23GO:0051180: vitamin transport3.75E-04
24GO:0046938: phytochelatin biosynthetic process3.75E-04
25GO:0030974: thiamine pyrophosphate transport3.75E-04
26GO:0009865: pollen tube adhesion3.75E-04
27GO:0050691: regulation of defense response to virus by host3.75E-04
28GO:0006680: glucosylceramide catabolic process3.75E-04
29GO:0090421: embryonic meristem initiation3.75E-04
30GO:0045489: pectin biosynthetic process4.53E-04
31GO:0042538: hyperosmotic salinity response5.53E-04
32GO:0098656: anion transmembrane transport6.19E-04
33GO:0046685: response to arsenic-containing substance6.19E-04
34GO:2000280: regulation of root development7.31E-04
35GO:0055088: lipid homeostasis8.15E-04
36GO:0015893: drug transport8.15E-04
37GO:0015786: UDP-glucose transport8.15E-04
38GO:1901679: nucleotide transmembrane transport8.15E-04
39GO:0052542: defense response by callose deposition8.15E-04
40GO:0010507: negative regulation of autophagy8.15E-04
41GO:0015709: thiosulfate transport8.15E-04
42GO:0071422: succinate transmembrane transport8.15E-04
43GO:0031407: oxylipin metabolic process8.15E-04
44GO:0010289: homogalacturonan biosynthetic process8.15E-04
45GO:0009737: response to abscisic acid8.88E-04
46GO:0009624: response to nematode1.05E-03
47GO:0042344: indole glucosinolate catabolic process1.32E-03
48GO:0044210: 'de novo' CTP biosynthetic process1.32E-03
49GO:0080121: AMP transport1.32E-03
50GO:0046786: viral replication complex formation and maintenance1.32E-03
51GO:0010288: response to lead ion1.32E-03
52GO:0090630: activation of GTPase activity1.32E-03
53GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid1.32E-03
54GO:0015783: GDP-fucose transport1.32E-03
55GO:0010325: raffinose family oligosaccharide biosynthetic process1.32E-03
56GO:0070588: calcium ion transmembrane transport1.60E-03
57GO:0070301: cellular response to hydrogen peroxide1.91E-03
58GO:0015729: oxaloacetate transport1.91E-03
59GO:0072334: UDP-galactose transmembrane transport1.91E-03
60GO:0080170: hydrogen peroxide transmembrane transport1.91E-03
61GO:0030100: regulation of endocytosis1.91E-03
62GO:0080024: indolebutyric acid metabolic process1.91E-03
63GO:0055089: fatty acid homeostasis1.91E-03
64GO:0010371: regulation of gibberellin biosynthetic process1.91E-03
65GO:0009863: salicylic acid mediated signaling pathway1.97E-03
66GO:0006839: mitochondrial transport2.11E-03
67GO:0045892: negative regulation of transcription, DNA-templated2.23E-03
68GO:0006952: defense response2.24E-03
69GO:0031408: oxylipin biosynthetic process2.39E-03
70GO:0045490: pectin catabolic process2.42E-03
71GO:0022622: root system development2.56E-03
72GO:0015867: ATP transport2.56E-03
73GO:0042991: transcription factor import into nucleus2.56E-03
74GO:1902347: response to strigolactone2.56E-03
75GO:0009687: abscisic acid metabolic process2.56E-03
76GO:0046345: abscisic acid catabolic process2.56E-03
77GO:0051365: cellular response to potassium ion starvation2.56E-03
78GO:0006468: protein phosphorylation2.78E-03
79GO:0001944: vasculature development2.86E-03
80GO:0009414: response to water deprivation3.18E-03
81GO:0032957: inositol trisphosphate metabolic process3.28E-03
82GO:0071423: malate transmembrane transport3.28E-03
83GO:0009823: cytokinin catabolic process3.28E-03
84GO:0006656: phosphatidylcholine biosynthetic process3.28E-03
85GO:0006873: cellular ion homeostasis3.28E-03
86GO:0048497: maintenance of floral organ identity3.28E-03
87GO:0006665: sphingolipid metabolic process3.28E-03
88GO:0042631: cellular response to water deprivation3.64E-03
89GO:0047484: regulation of response to osmotic stress4.05E-03
90GO:1900425: negative regulation of defense response to bacterium4.05E-03
91GO:0010337: regulation of salicylic acid metabolic process4.05E-03
92GO:0015866: ADP transport4.05E-03
93GO:0048367: shoot system development4.65E-03
94GO:1901001: negative regulation of response to salt stress4.88E-03
95GO:2000033: regulation of seed dormancy process4.88E-03
96GO:0010016: shoot system morphogenesis4.88E-03
97GO:0098655: cation transmembrane transport4.88E-03
98GO:0010555: response to mannitol4.88E-03
99GO:0042545: cell wall modification5.44E-03
100GO:0008272: sulfate transport5.77E-03
101GO:1902074: response to salt5.77E-03
102GO:0010103: stomatal complex morphogenesis5.77E-03
103GO:0032880: regulation of protein localization5.77E-03
104GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.77E-03
105GO:0019760: glucosinolate metabolic process5.88E-03
106GO:0009409: response to cold6.45E-03
107GO:0007155: cell adhesion6.70E-03
108GO:0009819: drought recovery6.70E-03
109GO:0009938: negative regulation of gibberellic acid mediated signaling pathway6.70E-03
110GO:1900150: regulation of defense response to fungus6.70E-03
111GO:0009690: cytokinin metabolic process6.70E-03
112GO:2000070: regulation of response to water deprivation6.70E-03
113GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway6.90E-03
114GO:0009880: embryonic pattern specification7.69E-03
115GO:0009827: plant-type cell wall modification7.69E-03
116GO:0006098: pentose-phosphate shunt8.73E-03
117GO:0001708: cell fate specification8.73E-03
118GO:0048268: clathrin coat assembly9.82E-03
119GO:0042761: very long-chain fatty acid biosynthetic process9.82E-03
120GO:0007346: regulation of mitotic cell cycle9.82E-03
121GO:0071555: cell wall organization1.00E-02
122GO:0055062: phosphate ion homeostasis1.10E-02
123GO:0019538: protein metabolic process1.10E-02
124GO:0009641: shade avoidance1.10E-02
125GO:0010150: leaf senescence1.14E-02
126GO:0009751: response to salicylic acid1.16E-02
127GO:0016051: carbohydrate biosynthetic process1.17E-02
128GO:0052544: defense response by callose deposition in cell wall1.21E-02
129GO:0010105: negative regulation of ethylene-activated signaling pathway1.34E-02
130GO:0000266: mitochondrial fission1.34E-02
131GO:0007166: cell surface receptor signaling pathway1.35E-02
132GO:0006631: fatty acid metabolic process1.39E-02
133GO:0006897: endocytosis1.39E-02
134GO:0010468: regulation of gene expression1.42E-02
135GO:2000012: regulation of auxin polar transport1.46E-02
136GO:0030048: actin filament-based movement1.46E-02
137GO:0050826: response to freezing1.46E-02
138GO:0018107: peptidyl-threonine phosphorylation1.46E-02
139GO:0005986: sucrose biosynthetic process1.46E-02
140GO:0051707: response to other organism1.51E-02
141GO:0048467: gynoecium development1.59E-02
142GO:0002237: response to molecule of bacterial origin1.59E-02
143GO:0007165: signal transduction1.61E-02
144GO:0080188: RNA-directed DNA methylation1.73E-02
145GO:0071732: cellular response to nitric oxide1.73E-02
146GO:0010030: positive regulation of seed germination1.73E-02
147GO:0009651: response to salt stress1.86E-02
148GO:0010025: wax biosynthetic process1.87E-02
149GO:0006636: unsaturated fatty acid biosynthetic process1.87E-02
150GO:0009833: plant-type primary cell wall biogenesis1.87E-02
151GO:0010187: negative regulation of seed germination2.01E-02
152GO:2000377: regulation of reactive oxygen species metabolic process2.01E-02
153GO:0009695: jasmonic acid biosynthetic process2.15E-02
154GO:0006970: response to osmotic stress2.17E-02
155GO:0009269: response to desiccation2.30E-02
156GO:0051321: meiotic cell cycle2.30E-02
157GO:0030245: cellulose catabolic process2.46E-02
158GO:0080167: response to karrikin2.59E-02
159GO:0071215: cellular response to abscisic acid stimulus2.62E-02
160GO:0071369: cellular response to ethylene stimulus2.62E-02
161GO:0009620: response to fungus2.65E-02
162GO:0010584: pollen exine formation2.78E-02
163GO:0048443: stamen development2.78E-02
164GO:0010089: xylem development2.78E-02
165GO:0008284: positive regulation of cell proliferation2.94E-02
166GO:0018105: peptidyl-serine phosphorylation2.98E-02
167GO:0000271: polysaccharide biosynthetic process3.11E-02
168GO:0010268: brassinosteroid homeostasis3.28E-02
169GO:0009958: positive gravitropism3.28E-02
170GO:0010154: fruit development3.28E-02
171GO:0048868: pollen tube development3.28E-02
172GO:0000398: mRNA splicing, via spliceosome3.34E-02
173GO:0008654: phospholipid biosynthetic process3.63E-02
174GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.81E-02
175GO:0000302: response to reactive oxygen species3.81E-02
176GO:0010193: response to ozone3.81E-02
177GO:0016132: brassinosteroid biosynthetic process3.81E-02
178GO:0055085: transmembrane transport3.95E-02
179GO:0071281: cellular response to iron ion4.17E-02
180GO:1901657: glycosyl compound metabolic process4.17E-02
181GO:0009790: embryo development4.22E-02
182GO:0016125: sterol metabolic process4.36E-02
183GO:0009639: response to red or far red light4.36E-02
184GO:0048364: root development4.43E-02
185GO:0006633: fatty acid biosynthetic process4.54E-02
186GO:0009911: positive regulation of flower development4.94E-02
187GO:0007623: circadian rhythm4.98E-02
RankGO TermAdjusted P value
1GO:0004698: calcium-dependent protein kinase C activity0.00E+00
2GO:0017048: Rho GTPase binding0.00E+00
3GO:0042171: lysophosphatidic acid acyltransferase activity0.00E+00
4GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
5GO:0016629: 12-oxophytodienoate reductase activity6.33E-06
6GO:0043565: sequence-specific DNA binding7.11E-06
7GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity4.86E-05
8GO:0003883: CTP synthase activity4.86E-05
9GO:0044212: transcription regulatory region DNA binding8.61E-05
10GO:0003700: transcription factor activity, sequence-specific DNA binding1.24E-04
11GO:0090422: thiamine pyrophosphate transporter activity3.75E-04
12GO:0004105: choline-phosphate cytidylyltransferase activity3.75E-04
13GO:0046870: cadmium ion binding3.75E-04
14GO:0015446: ATPase-coupled arsenite transmembrane transporter activity3.75E-04
15GO:0052638: indole-3-butyrate beta-glucosyltransferase activity3.75E-04
16GO:0004348: glucosylceramidase activity3.75E-04
17GO:0071992: phytochelatin transmembrane transporter activity3.75E-04
18GO:0015117: thiosulfate transmembrane transporter activity8.15E-04
19GO:1901677: phosphate transmembrane transporter activity8.15E-04
20GO:0017022: myosin binding8.15E-04
21GO:0004103: choline kinase activity8.15E-04
22GO:0001047: core promoter binding8.15E-04
23GO:0042389: omega-3 fatty acid desaturase activity8.15E-04
24GO:0017040: ceramidase activity8.15E-04
25GO:0003839: gamma-glutamylcyclotransferase activity8.15E-04
26GO:0015105: arsenite transmembrane transporter activity8.15E-04
27GO:0005310: dicarboxylic acid transmembrane transporter activity1.32E-03
28GO:0047274: galactinol-sucrose galactosyltransferase activity1.32E-03
29GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.32E-03
30GO:0015141: succinate transmembrane transporter activity1.32E-03
31GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity1.32E-03
32GO:0003840: gamma-glutamyltransferase activity1.32E-03
33GO:0036374: glutathione hydrolase activity1.32E-03
34GO:0004383: guanylate cyclase activity1.32E-03
35GO:0005457: GDP-fucose transmembrane transporter activity1.32E-03
36GO:0047325: inositol tetrakisphosphate 1-kinase activity1.32E-03
37GO:0008083: growth factor activity1.43E-03
38GO:0001653: peptide receptor activity1.91E-03
39GO:0015131: oxaloacetate transmembrane transporter activity1.91E-03
40GO:0005460: UDP-glucose transmembrane transporter activity1.91E-03
41GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.91E-03
42GO:0016301: kinase activity2.00E-03
43GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity2.56E-03
44GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.62E-03
45GO:0010294: abscisic acid glucosyltransferase activity3.28E-03
46GO:0009922: fatty acid elongase activity3.28E-03
47GO:0005459: UDP-galactose transmembrane transporter activity3.28E-03
48GO:0019139: cytokinin dehydrogenase activity3.28E-03
49GO:0080122: AMP transmembrane transporter activity3.28E-03
50GO:0004623: phospholipase A2 activity3.28E-03
51GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.28E-03
52GO:0045330: aspartyl esterase activity4.11E-03
53GO:0010181: FMN binding4.22E-03
54GO:0005347: ATP transmembrane transporter activity4.88E-03
55GO:0051020: GTPase binding4.88E-03
56GO:0015217: ADP transmembrane transporter activity4.88E-03
57GO:0080044: quercetin 7-O-glucosyltransferase activity5.03E-03
58GO:0080043: quercetin 3-O-glucosyltransferase activity5.03E-03
59GO:0030599: pectinesterase activity5.24E-03
60GO:0016621: cinnamoyl-CoA reductase activity5.77E-03
61GO:0015140: malate transmembrane transporter activity5.77E-03
62GO:0016209: antioxidant activity6.70E-03
63GO:0016758: transferase activity, transferring hexosyl groups7.28E-03
64GO:0008308: voltage-gated anion channel activity7.69E-03
65GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.69E-03
66GO:0000989: transcription factor activity, transcription factor binding8.73E-03
67GO:0004674: protein serine/threonine kinase activity8.74E-03
68GO:0005096: GTPase activator activity9.64E-03
69GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.04E-02
70GO:0015297: antiporter activity1.07E-02
71GO:0004713: protein tyrosine kinase activity1.10E-02
72GO:0005545: 1-phosphatidylinositol binding1.10E-02
73GO:0003677: DNA binding1.13E-02
74GO:0015116: sulfate transmembrane transporter activity1.34E-02
75GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.39E-02
76GO:0015114: phosphate ion transmembrane transporter activity1.46E-02
77GO:0005388: calcium-transporting ATPase activity1.46E-02
78GO:0005315: inorganic phosphate transmembrane transporter activity1.46E-02
79GO:0005262: calcium channel activity1.46E-02
80GO:0019888: protein phosphatase regulator activity1.46E-02
81GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.59E-02
82GO:0003774: motor activity1.59E-02
83GO:0008146: sulfotransferase activity1.73E-02
84GO:0005516: calmodulin binding1.74E-02
85GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.87E-02
86GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.87E-02
87GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.87E-02
88GO:0004857: enzyme inhibitor activity2.01E-02
89GO:0051087: chaperone binding2.15E-02
90GO:0035251: UDP-glucosyltransferase activity2.30E-02
91GO:0004707: MAP kinase activity2.30E-02
92GO:0030570: pectate lyase activity2.62E-02
93GO:0008514: organic anion transmembrane transporter activity2.78E-02
94GO:0030276: clathrin binding3.28E-02
95GO:0016722: oxidoreductase activity, oxidizing metal ions4.55E-02
96GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.55E-02
97GO:0046910: pectinesterase inhibitor activity4.65E-02
98GO:0016413: O-acetyltransferase activity4.75E-02
99GO:0016597: amino acid binding4.75E-02
100GO:0015250: water channel activity4.94E-02
RankGO TermAdjusted P value
1GO:0070382: exocytic vesicle3.75E-04
2GO:0042170: plastid membrane8.15E-04
3GO:0030133: transport vesicle8.15E-04
4GO:0045177: apical part of cell1.91E-03
5GO:0046658: anchored component of plasma membrane3.72E-03
6GO:0005622: intracellular7.77E-03
7GO:0016604: nuclear body9.82E-03
8GO:0015030: Cajal body9.82E-03
9GO:0005743: mitochondrial inner membrane1.06E-02
10GO:0000159: protein phosphatase type 2A complex1.21E-02
11GO:0043231: intracellular membrane-bounded organelle1.37E-02
12GO:0005938: cell cortex1.46E-02
13GO:0005634: nucleus2.00E-02
14GO:0005905: clathrin-coated pit2.30E-02
15GO:0005768: endosome2.40E-02
16GO:0005681: spliceosomal complex2.41E-02
17GO:0005618: cell wall2.69E-02
18GO:0030136: clathrin-coated vesicle2.94E-02
19GO:0009505: plant-type cell wall4.16E-02
20GO:0000139: Golgi membrane4.71E-02
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Gene type



Gene DE type