GO Enrichment Analysis of Co-expressed Genes with
AT5G44610
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 2 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 3 | GO:0010027: thylakoid membrane organization | 2.82E-08 |
| 4 | GO:0010196: nonphotochemical quenching | 3.78E-06 |
| 5 | GO:0015979: photosynthesis | 1.26E-05 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 1.56E-05 |
| 7 | GO:0043007: maintenance of rDNA | 2.19E-05 |
| 8 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.24E-05 |
| 9 | GO:0035304: regulation of protein dephosphorylation | 5.64E-05 |
| 10 | GO:0018026: peptidyl-lysine monomethylation | 5.64E-05 |
| 11 | GO:0097054: L-glutamate biosynthetic process | 5.64E-05 |
| 12 | GO:0009416: response to light stimulus | 6.41E-05 |
| 13 | GO:0090391: granum assembly | 9.94E-05 |
| 14 | GO:0006537: glutamate biosynthetic process | 1.49E-04 |
| 15 | GO:0019676: ammonia assimilation cycle | 2.04E-04 |
| 16 | GO:0015976: carbon utilization | 2.04E-04 |
| 17 | GO:0009765: photosynthesis, light harvesting | 2.04E-04 |
| 18 | GO:0015994: chlorophyll metabolic process | 2.04E-04 |
| 19 | GO:0018298: protein-chromophore linkage | 2.11E-04 |
| 20 | GO:0042793: transcription from plastid promoter | 3.24E-04 |
| 21 | GO:0042549: photosystem II stabilization | 3.24E-04 |
| 22 | GO:0030488: tRNA methylation | 3.89E-04 |
| 23 | GO:0009645: response to low light intensity stimulus | 4.56E-04 |
| 24 | GO:0009769: photosynthesis, light harvesting in photosystem II | 4.56E-04 |
| 25 | GO:0010206: photosystem II repair | 6.71E-04 |
| 26 | GO:0010205: photoinhibition | 7.48E-04 |
| 27 | GO:0019684: photosynthesis, light reaction | 9.07E-04 |
| 28 | GO:0009073: aromatic amino acid family biosynthetic process | 9.07E-04 |
| 29 | GO:0010207: photosystem II assembly | 1.16E-03 |
| 30 | GO:0061077: chaperone-mediated protein folding | 1.63E-03 |
| 31 | GO:0009269: response to desiccation | 1.63E-03 |
| 32 | GO:0009658: chloroplast organization | 1.67E-03 |
| 33 | GO:0009561: megagametogenesis | 1.94E-03 |
| 34 | GO:0071554: cell wall organization or biogenesis | 2.61E-03 |
| 35 | GO:0010218: response to far red light | 4.28E-03 |
| 36 | GO:0009637: response to blue light | 4.70E-03 |
| 37 | GO:0009853: photorespiration | 4.70E-03 |
| 38 | GO:0010114: response to red light | 5.60E-03 |
| 39 | GO:0009744: response to sucrose | 5.60E-03 |
| 40 | GO:0009644: response to high light intensity | 5.91E-03 |
| 41 | GO:0006364: rRNA processing | 6.88E-03 |
| 42 | GO:0006396: RNA processing | 8.97E-03 |
| 43 | GO:0006979: response to oxidative stress | 1.09E-02 |
| 44 | GO:0009790: embryo development | 1.15E-02 |
| 45 | GO:0009409: response to cold | 1.47E-02 |
| 46 | GO:0006281: DNA repair | 2.71E-02 |
| 47 | GO:0009908: flower development | 3.79E-02 |
| 48 | GO:0009555: pollen development | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 2 | GO:0031072: heat shock protein binding | 2.17E-05 |
| 3 | GO:0016041: glutamate synthase (ferredoxin) activity | 2.19E-05 |
| 4 | GO:0010242: oxygen evolving activity | 2.19E-05 |
| 5 | GO:0031409: pigment binding | 3.32E-05 |
| 6 | GO:0047746: chlorophyllase activity | 5.64E-05 |
| 7 | GO:0016168: chlorophyll binding | 1.69E-04 |
| 8 | GO:0016279: protein-lysine N-methyltransferase activity | 2.04E-04 |
| 9 | GO:0051538: 3 iron, 4 sulfur cluster binding | 2.62E-04 |
| 10 | GO:0004033: aldo-keto reductase (NADP) activity | 5.25E-04 |
| 11 | GO:0008173: RNA methyltransferase activity | 5.98E-04 |
| 12 | GO:0051082: unfolded protein binding | 6.56E-04 |
| 13 | GO:0004089: carbonate dehydratase activity | 1.07E-03 |
| 14 | GO:0008266: poly(U) RNA binding | 1.16E-03 |
| 15 | GO:0005528: FK506 binding | 1.43E-03 |
| 16 | GO:0000287: magnesium ion binding | 1.64E-03 |
| 17 | GO:0003756: protein disulfide isomerase activity | 1.94E-03 |
| 18 | GO:0016413: O-acetyltransferase activity | 3.22E-03 |
| 19 | GO:0005515: protein binding | 6.12E-03 |
| 20 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.23E-03 |
| 21 | GO:0005509: calcium ion binding | 9.96E-03 |
| 22 | GO:0042802: identical protein binding | 1.53E-02 |
| 23 | GO:0046872: metal ion binding | 1.69E-02 |
| 24 | GO:0016787: hydrolase activity | 2.32E-02 |
| 25 | GO:0003924: GTPase activity | 2.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009534: chloroplast thylakoid | 1.56E-23 |
| 2 | GO:0009507: chloroplast | 1.03E-17 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.56E-17 |
| 4 | GO:0009579: thylakoid | 5.64E-09 |
| 5 | GO:0010287: plastoglobule | 1.61E-08 |
| 6 | GO:0009941: chloroplast envelope | 3.01E-08 |
| 7 | GO:0031977: thylakoid lumen | 1.35E-07 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.18E-06 |
| 9 | GO:0009570: chloroplast stroma | 1.83E-06 |
| 10 | GO:0009515: granal stacked thylakoid | 2.19E-05 |
| 11 | GO:0009783: photosystem II antenna complex | 2.19E-05 |
| 12 | GO:0030095: chloroplast photosystem II | 2.53E-05 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 4.24E-05 |
| 14 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 5.64E-05 |
| 15 | GO:0009522: photosystem I | 9.13E-05 |
| 16 | GO:0019898: extrinsic component of membrane | 9.89E-05 |
| 17 | GO:0009517: PSII associated light-harvesting complex II | 2.04E-04 |
| 18 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 6.71E-04 |
| 19 | GO:0009508: plastid chromosome | 1.07E-03 |
| 20 | GO:0030076: light-harvesting complex | 1.25E-03 |
| 21 | GO:0009523: photosystem II | 2.49E-03 |
| 22 | GO:0009295: nucleoid | 3.09E-03 |
| 23 | GO:0009706: chloroplast inner membrane | 8.79E-03 |
| 24 | GO:0005759: mitochondrial matrix | 1.21E-02 |
| 25 | GO:0016021: integral component of membrane | 3.77E-02 |
| 26 | GO:0048046: apoplast | 3.94E-02 |