co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G43950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:1904526: regulation of microtubule binding	0.00E+00
3	GO:0010412: mannan metabolic process	0.00E+00
4	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
5	GO:0000038: very long-chain fatty acid metabolic process	1.40E-06
6	GO:0010025: wax biosynthetic process	5.85E-06
7	GO:0009409: response to cold	1.05E-05
8	GO:0070417: cellular response to cold	2.34E-05
9	GO:0042335: cuticle development	2.76E-05
10	GO:0009913: epidermal cell differentiation	1.84E-04
11	GO:0035435: phosphate ion transmembrane transport	1.84E-04
12	GO:0009631: cold acclimation	2.05E-04
13	GO:0045926: negative regulation of growth	2.49E-04
14	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.58E-04
15	GO:0097298: regulation of nucleus size	3.65E-04
16	GO:0080051: cutin transport	3.65E-04
17	GO:0060627: regulation of vesicle-mediated transport	3.65E-04
18	GO:0009609: response to symbiotic bacterium	3.65E-04
19	GO:1902265: abscisic acid homeostasis	3.65E-04
20	GO:0006633: fatty acid biosynthetic process	3.90E-04
21	GO:0009819: drought recovery	4.05E-04
22	GO:0008610: lipid biosynthetic process	4.05E-04
23	GO:0015908: fatty acid transport	7.94E-04
24	GO:0006898: receptor-mediated endocytosis	7.94E-04
25	GO:0015786: UDP-glucose transport	7.94E-04
26	GO:1901679: nucleotide transmembrane transport	7.94E-04
27	GO:0015709: thiosulfate transport	7.94E-04
28	GO:0071258: cellular response to gravity	7.94E-04
29	GO:0071422: succinate transmembrane transport	7.94E-04
30	GO:0031407: oxylipin metabolic process	7.94E-04
31	GO:0010289: homogalacturonan biosynthetic process	7.94E-04
32	GO:0071712: ER-associated misfolded protein catabolic process	7.94E-04
33	GO:0032527: protein exit from endoplasmic reticulum	7.94E-04
34	GO:0030148: sphingolipid biosynthetic process	9.42E-04
35	GO:0030244: cellulose biosynthetic process	1.25E-03
36	GO:0051211: anisotropic cell growth	1.29E-03
37	GO:0032940: secretion by cell	1.29E-03
38	GO:0044210: 'de novo' CTP biosynthetic process	1.29E-03
39	GO:0016045: detection of bacterium	1.29E-03
40	GO:0080121: AMP transport	1.29E-03
41	GO:0010359: regulation of anion channel activity	1.29E-03
42	GO:0015783: GDP-fucose transport	1.29E-03
43	GO:0006811: ion transport	1.42E-03
44	GO:0009833: plant-type primary cell wall biogenesis	1.71E-03
45	GO:0006424: glutamyl-tRNA aminoacylation	1.85E-03
46	GO:1901332: negative regulation of lateral root development	1.85E-03
47	GO:1901000: regulation of response to salt stress	1.85E-03
48	GO:0015729: oxaloacetate transport	1.85E-03
49	GO:0072334: UDP-galactose transmembrane transport	1.85E-03
50	GO:0030100: regulation of endocytosis	1.85E-03
51	GO:0007017: microtubule-based process	2.09E-03
52	GO:0006631: fatty acid metabolic process	2.11E-03
53	GO:0045490: pectin catabolic process	2.27E-03
54	GO:2000122: negative regulation of stomatal complex development	2.49E-03
55	GO:0006552: leucine catabolic process	2.49E-03
56	GO:0042991: transcription factor import into nucleus	2.49E-03
57	GO:0015867: ATP transport	2.49E-03
58	GO:0010037: response to carbon dioxide	2.49E-03
59	GO:0010222: stem vascular tissue pattern formation	2.49E-03
60	GO:0009687: abscisic acid metabolic process	2.49E-03
61	GO:0015976: carbon utilization	2.49E-03
62	GO:0046345: abscisic acid catabolic process	2.49E-03
63	GO:0015689: molybdate ion transport	2.49E-03
64	GO:0045727: positive regulation of translation	2.49E-03
65	GO:0046355: mannan catabolic process	2.49E-03
66	GO:0022622: root system development	2.49E-03
67	GO:0071585: detoxification of cadmium ion	2.49E-03
68	GO:0001944: vasculature development	2.74E-03
69	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.74E-03
70	GO:0071555: cell wall organization	3.05E-03
71	GO:0042538: hyperosmotic salinity response	3.12E-03
72	GO:0071423: malate transmembrane transport	3.18E-03
73	GO:0009823: cytokinin catabolic process	3.18E-03
74	GO:0006656: phosphatidylcholine biosynthetic process	3.18E-03
75	GO:0032543: mitochondrial translation	3.18E-03
76	GO:0006873: cellular ion homeostasis	3.18E-03
77	GO:0006461: protein complex assembly	3.18E-03
78	GO:0006665: sphingolipid metabolic process	3.18E-03
79	GO:0042631: cellular response to water deprivation	3.49E-03
80	GO:0000226: microtubule cytoskeleton organization	3.49E-03
81	GO:0047484: regulation of response to osmotic stress	3.93E-03
82	GO:1900425: negative regulation of defense response to bacterium	3.93E-03
83	GO:0006574: valine catabolic process	3.93E-03
84	GO:0015866: ADP transport	3.93E-03
85	GO:0048825: cotyledon development	4.34E-03
86	GO:0000302: response to reactive oxygen species	4.65E-03
87	GO:0009082: branched-chain amino acid biosynthetic process	4.74E-03
88	GO:0098655: cation transmembrane transport	4.74E-03
89	GO:0010555: response to mannitol	4.74E-03
90	GO:0009955: adaxial/abaxial pattern specification	4.74E-03
91	GO:0071470: cellular response to osmotic stress	4.74E-03
92	GO:0042545: cell wall modification	5.16E-03
93	GO:0008272: sulfate transport	5.60E-03
94	GO:0050829: defense response to Gram-negative bacterium	5.60E-03
95	GO:1902074: response to salt	5.60E-03
96	GO:0010103: stomatal complex morphogenesis	5.60E-03
97	GO:0032880: regulation of protein localization	5.60E-03
98	GO:0009610: response to symbiotic fungus	5.60E-03
99	GO:0030497: fatty acid elongation	5.60E-03
100	GO:0009828: plant-type cell wall loosening	5.63E-03
101	GO:0009737: response to abscisic acid	5.91E-03
102	GO:0080167: response to karrikin	6.14E-03
103	GO:0010200: response to chitin	6.47E-03
104	GO:0042255: ribosome assembly	6.51E-03
105	GO:0006353: DNA-templated transcription, termination	6.51E-03
106	GO:0009690: cytokinin metabolic process	6.51E-03
107	GO:0009704: de-etiolation	6.51E-03
108	GO:0007155: cell adhesion	6.51E-03
109	GO:0035265: organ growth	6.51E-03
110	GO:0006997: nucleus organization	7.47E-03
111	GO:0032544: plastid translation	7.47E-03
112	GO:0009827: plant-type cell wall modification	7.47E-03
113	GO:0009416: response to light stimulus	7.96E-03
114	GO:0098656: anion transmembrane transport	8.47E-03
115	GO:0006098: pentose-phosphate shunt	8.47E-03
116	GO:0048767: root hair elongation	9.24E-03
117	GO:2000280: regulation of root development	9.53E-03
118	GO:0042761: very long-chain fatty acid biosynthetic process	9.53E-03
119	GO:0009641: shade avoidance	1.06E-02
120	GO:0006949: syncytium formation	1.06E-02
121	GO:0010150: leaf senescence	1.08E-02
122	GO:0052544: defense response by callose deposition in cell wall	1.18E-02
123	GO:0055085: transmembrane transport	1.20E-02
124	GO:0006839: mitochondrial transport	1.27E-02
125	GO:0006470: protein dephosphorylation	1.28E-02
126	GO:0016024: CDP-diacylglycerol biosynthetic process	1.30E-02
127	GO:0045037: protein import into chloroplast stroma	1.30E-02
128	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.30E-02
129	GO:0005983: starch catabolic process	1.30E-02
130	GO:0018107: peptidyl-threonine phosphorylation	1.42E-02
131	GO:0010588: cotyledon vascular tissue pattern formation	1.42E-02
132	GO:2000012: regulation of auxin polar transport	1.42E-02
133	GO:0010540: basipetal auxin transport	1.55E-02
134	GO:0010143: cutin biosynthetic process	1.55E-02
135	GO:0009873: ethylene-activated signaling pathway	1.63E-02
136	GO:0010030: positive regulation of seed germination	1.68E-02
137	GO:0070588: calcium ion transmembrane transport	1.68E-02
138	GO:0009826: unidimensional cell growth	1.79E-02
139	GO:0006636: unsaturated fatty acid biosynthetic process	1.81E-02
140	GO:0009664: plant-type cell wall organization	1.81E-02
141	GO:0030150: protein import into mitochondrial matrix	1.95E-02
142	GO:0006289: nucleotide-excision repair	1.95E-02
143	GO:0005975: carbohydrate metabolic process	2.06E-02
144	GO:0031408: oxylipin biosynthetic process	2.24E-02
145	GO:0016998: cell wall macromolecule catabolic process	2.24E-02
146	GO:0019915: lipid storage	2.24E-02
147	GO:0009269: response to desiccation	2.24E-02
148	GO:0043086: negative regulation of catalytic activity	2.31E-02
149	GO:0048367: shoot system development	2.38E-02
150	GO:0030245: cellulose catabolic process	2.38E-02
151	GO:0009414: response to water deprivation	2.56E-02
152	GO:0006284: base-excision repair	2.69E-02
153	GO:0009611: response to wounding	2.71E-02
154	GO:0006979: response to oxidative stress	2.71E-02
155	GO:0009624: response to nematode	2.78E-02
156	GO:0008284: positive regulation of cell proliferation	2.85E-02
157	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.85E-02
158	GO:0009958: positive gravitropism	3.18E-02
159	GO:0048868: pollen tube development	3.18E-02
160	GO:0010268: brassinosteroid homeostasis	3.18E-02
161	GO:0045489: pectin biosynthetic process	3.18E-02
162	GO:0009749: response to glucose	3.52E-02
163	GO:0019252: starch biosynthetic process	3.52E-02
164	GO:0009058: biosynthetic process	3.66E-02
165	GO:0016132: brassinosteroid biosynthetic process	3.69E-02
166	GO:0010583: response to cyclopentenone	3.87E-02
167	GO:0032502: developmental process	3.87E-02
168	GO:0010252: auxin homeostasis	4.23E-02
169	GO:0009639: response to red or far red light	4.23E-02
170	GO:0006310: DNA recombination	4.23E-02
171	GO:0016125: sterol metabolic process	4.23E-02
172	GO:0019760: glucosinolate metabolic process	4.23E-02
173	GO:0007623: circadian rhythm	4.78E-02
174	GO:0006355: regulation of transcription, DNA-templated	4.79E-02
175	GO:0010029: regulation of seed germination	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0052631: sphingolipid delta-8 desaturase activity	0.00E+00
2	GO:0051060: pullulanase activity	0.00E+00
3	GO:0010303: limit dextrinase activity	0.00E+00
4	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	5.85E-06
5	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	5.85E-06
6	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	5.85E-06
7	GO:0003883: CTP synthase activity	4.63E-05
8	GO:0009922: fatty acid elongase activity	1.28E-04
9	GO:0005534: galactose binding	3.65E-04
10	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	3.65E-04
11	GO:0015245: fatty acid transporter activity	3.65E-04
12	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	3.65E-04
13	GO:0004105: choline-phosphate cytidylyltransferase activity	3.65E-04
14	GO:0015117: thiosulfate transmembrane transporter activity	7.94E-04
15	GO:1901677: phosphate transmembrane transporter activity	7.94E-04
16	GO:0016629: 12-oxophytodienoate reductase activity	7.94E-04
17	GO:0042389: omega-3 fatty acid desaturase activity	7.94E-04
18	GO:0017040: ceramidase activity	7.94E-04
19	GO:0044390: ubiquitin-like protein conjugating enzyme binding	7.94E-04
20	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.19E-03
21	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	1.29E-03
22	GO:0015141: succinate transmembrane transporter activity	1.29E-03
23	GO:0017108: 5'-flap endonuclease activity	1.29E-03
24	GO:0005457: GDP-fucose transmembrane transporter activity	1.29E-03
25	GO:0070330: aromatase activity	1.29E-03
26	GO:0005310: dicarboxylic acid transmembrane transporter activity	1.29E-03
27	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.37E-03
28	GO:0043565: sequence-specific DNA binding	1.52E-03
29	GO:0015131: oxaloacetate transmembrane transporter activity	1.85E-03
30	GO:0005460: UDP-glucose transmembrane transporter activity	1.85E-03
31	GO:0052656: L-isoleucine transaminase activity	1.85E-03
32	GO:0052654: L-leucine transaminase activity	1.85E-03
33	GO:0052655: L-valine transaminase activity	1.85E-03
34	GO:0046910: pectinesterase inhibitor activity	2.04E-03
35	GO:0015098: molybdate ion transmembrane transporter activity	2.49E-03
36	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	2.49E-03
37	GO:0016985: mannan endo-1,4-beta-mannosidase activity	2.49E-03
38	GO:0019104: DNA N-glycosylase activity	2.49E-03
39	GO:0004084: branched-chain-amino-acid transaminase activity	2.49E-03
40	GO:0080122: AMP transmembrane transporter activity	3.18E-03
41	GO:0018685: alkane 1-monooxygenase activity	3.18E-03
42	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.18E-03
43	GO:0010294: abscisic acid glucosyltransferase activity	3.18E-03
44	GO:0005459: UDP-galactose transmembrane transporter activity	3.18E-03
45	GO:0019139: cytokinin dehydrogenase activity	3.18E-03
46	GO:0045330: aspartyl esterase activity	3.89E-03
47	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.93E-03
48	GO:0004556: alpha-amylase activity	3.93E-03
49	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	3.93E-03
50	GO:0005347: ATP transmembrane transporter activity	4.74E-03
51	GO:0015217: ADP transmembrane transporter activity	4.74E-03
52	GO:0030599: pectinesterase activity	4.96E-03
53	GO:0016746: transferase activity, transferring acyl groups	5.56E-03
54	GO:0015140: malate transmembrane transporter activity	5.60E-03
55	GO:0004620: phospholipase activity	5.60E-03
56	GO:0005200: structural constituent of cytoskeleton	5.99E-03
57	GO:0052747: sinapyl alcohol dehydrogenase activity	6.51E-03
58	GO:0015288: porin activity	6.51E-03
59	GO:0016209: antioxidant activity	6.51E-03
60	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	7.47E-03
61	GO:0008308: voltage-gated anion channel activity	7.47E-03
62	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	8.35E-03
63	GO:0009672: auxin:proton symporter activity	9.53E-03
64	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.85E-03
65	GO:0015020: glucuronosyltransferase activity	1.06E-02
66	GO:0003924: GTPase activity	1.11E-02
67	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.30E-02
68	GO:0015116: sulfate transmembrane transporter activity	1.30E-02
69	GO:0010329: auxin efflux transmembrane transporter activity	1.42E-02
70	GO:0015266: protein channel activity	1.42E-02
71	GO:0004089: carbonate dehydratase activity	1.42E-02
72	GO:0005262: calcium channel activity	1.42E-02
73	GO:0015114: phosphate ion transmembrane transporter activity	1.42E-02
74	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.46E-02
75	GO:0008266: poly(U) RNA binding	1.55E-02
76	GO:0008083: growth factor activity	1.55E-02
77	GO:0008146: sulfotransferase activity	1.68E-02
78	GO:0003690: double-stranded DNA binding	2.02E-02
79	GO:0004707: MAP kinase activity	2.24E-02
80	GO:0030570: pectate lyase activity	2.54E-02
81	GO:0008810: cellulase activity	2.54E-02
82	GO:0016760: cellulose synthase (UDP-forming) activity	2.54E-02
83	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.54E-02
84	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.54E-02
85	GO:0016874: ligase activity	2.62E-02
86	GO:0061630: ubiquitin protein ligase activity	2.62E-02
87	GO:0044212: transcription regulatory region DNA binding	2.67E-02
88	GO:0003727: single-stranded RNA binding	2.69E-02
89	GO:0003713: transcription coactivator activity	3.18E-02
90	GO:0010181: FMN binding	3.35E-02
91	GO:0050662: coenzyme binding	3.35E-02
92	GO:0004722: protein serine/threonine phosphatase activity	3.45E-02
93	GO:0019843: rRNA binding	3.48E-02
94	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.69E-02
95	GO:0004518: nuclease activity	3.87E-02
96	GO:0004674: protein serine/threonine kinase activity	3.92E-02
97	GO:0016791: phosphatase activity	4.23E-02
98	GO:0016759: cellulose synthase activity	4.23E-02
99	GO:0003684: damaged DNA binding	4.23E-02
100	GO:0004842: ubiquitin-protein transferase activity	4.55E-02
101	GO:0015297: antiporter activity	4.56E-02
102	GO:0016413: O-acetyltransferase activity	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0033557: Slx1-Slx4 complex	0.00E+00
2	GO:0034426: etioplast membrane	0.00E+00
3	GO:0031357: integral component of chloroplast inner membrane	6.00E-06
4	GO:0005886: plasma membrane	9.09E-05
5	GO:0009505: plant-type cell wall	1.60E-04
6	GO:0005618: cell wall	2.54E-04
7	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	3.65E-04
8	GO:0045298: tubulin complex	5.94E-04
9	GO:0046658: anchored component of plasma membrane	7.66E-04
10	GO:0042170: plastid membrane	7.94E-04
11	GO:0016021: integral component of membrane	8.03E-04
12	GO:0016020: membrane	1.25E-03
13	GO:0009897: external side of plasma membrane	1.29E-03
14	GO:0005652: nuclear lamina	1.29E-03
15	GO:0036513: Derlin-1 retrotranslocation complex	1.85E-03
16	GO:0005768: endosome	2.42E-03
17	GO:0009527: plastid outer membrane	2.49E-03
18	GO:0009941: chloroplast envelope	2.88E-03
19	GO:0005798: Golgi-associated vesicle	3.93E-03
20	GO:0000793: condensed chromosome	3.93E-03
21	GO:0031225: anchored component of membrane	5.55E-03
22	GO:0000794: condensed nuclear chromosome	5.60E-03
23	GO:0005802: trans-Golgi network	5.84E-03
24	GO:0034399: nuclear periphery	6.51E-03
25	GO:0031305: integral component of mitochondrial inner membrane	6.51E-03
26	GO:0046930: pore complex	7.47E-03
27	GO:0005789: endoplasmic reticulum membrane	7.63E-03
28	GO:0009508: plastid chromosome	1.42E-02
29	GO:0005576: extracellular region	1.42E-02
30	GO:0005769: early endosome	1.81E-02
31	GO:0005783: endoplasmic reticulum	1.95E-02
32	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.69E-02
33	GO:0010287: plastoglobule	3.29E-02
34	GO:0031965: nuclear membrane	3.52E-02
35	GO:0005743: mitochondrial inner membrane	3.65E-02
36	GO:0071944: cell periphery	4.05E-02
37	GO:0009295: nucleoid	4.42E-02
38	GO:0010319: stromule	4.42E-02