co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G43630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
2	GO:0042908: xenobiotic transport	0.00E+00
3	GO:0018293: protein-FAD linkage	0.00E+00
4	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
5	GO:0010100: negative regulation of photomorphogenesis	4.17E-07
6	GO:0007623: circadian rhythm	3.66E-06
7	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	7.75E-05
8	GO:1903409: reactive oxygen species biosynthetic process	7.75E-05
9	GO:0048438: floral whorl development	7.75E-05
10	GO:0000305: response to oxygen radical	7.75E-05
11	GO:0000103: sulfate assimilation	8.82E-05
12	GO:0010220: positive regulation of vernalization response	1.85E-04
13	GO:0080183: response to photooxidative stress	1.85E-04
14	GO:0043100: pyrimidine nucleobase salvage	1.85E-04
15	GO:0042754: negative regulation of circadian rhythm	1.85E-04
16	GO:0019419: sulfate reduction	3.11E-04
17	GO:0071230: cellular response to amino acid stimulus	3.11E-04
18	GO:1901562: response to paraquat	3.11E-04
19	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	4.49E-04
20	GO:0015700: arsenite transport	4.49E-04
21	GO:0010600: regulation of auxin biosynthetic process	5.98E-04
22	GO:0006749: glutathione metabolic process	5.98E-04
23	GO:0071483: cellular response to blue light	5.98E-04
24	GO:0009902: chloroplast relocation	5.98E-04
25	GO:0010021: amylopectin biosynthetic process	5.98E-04
26	GO:0006646: phosphatidylethanolamine biosynthetic process	5.98E-04
27	GO:0070534: protein K63-linked ubiquitination	5.98E-04
28	GO:0010236: plastoquinone biosynthetic process	7.57E-04
29	GO:0009739: response to gibberellin	7.90E-04
30	GO:0000060: protein import into nucleus, translocation	9.24E-04
31	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	9.24E-04
32	GO:0006301: postreplication repair	9.24E-04
33	GO:0070814: hydrogen sulfide biosynthetic process	9.24E-04
34	GO:0010076: maintenance of floral meristem identity	1.10E-03
35	GO:0017148: negative regulation of translation	1.10E-03
36	GO:0010077: maintenance of inflorescence meristem identity	1.10E-03
37	GO:0070370: cellular heat acclimation	1.29E-03
38	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.29E-03
39	GO:0030091: protein repair	1.48E-03
40	GO:0009231: riboflavin biosynthetic process	1.48E-03
41	GO:0048574: long-day photoperiodism, flowering	1.69E-03
42	GO:0015996: chlorophyll catabolic process	1.69E-03
43	GO:0009835: fruit ripening	1.91E-03
44	GO:0046685: response to arsenic-containing substance	1.91E-03
45	GO:0006855: drug transmembrane transport	1.92E-03
46	GO:0045454: cell redox homeostasis	1.93E-03
47	GO:0009970: cellular response to sulfate starvation	2.37E-03
48	GO:0009909: regulation of flower development	2.44E-03
49	GO:0006816: calcium ion transport	2.61E-03
50	GO:0000272: polysaccharide catabolic process	2.61E-03
51	GO:0010582: floral meristem determinacy	2.86E-03
52	GO:0051017: actin filament bundle assembly	4.23E-03
53	GO:0019344: cysteine biosynthetic process	4.23E-03
54	GO:0006874: cellular calcium ion homeostasis	4.52E-03
55	GO:0008299: isoprenoid biosynthetic process	4.52E-03
56	GO:0035556: intracellular signal transduction	5.56E-03
57	GO:0042391: regulation of membrane potential	6.44E-03
58	GO:0080022: primary root development	6.44E-03
59	GO:0042631: cellular response to water deprivation	6.44E-03
60	GO:0010182: sugar mediated signaling pathway	6.78E-03
61	GO:0009741: response to brassinosteroid	6.78E-03
62	GO:0042752: regulation of circadian rhythm	7.13E-03
63	GO:0019252: starch biosynthetic process	7.49E-03
64	GO:0008654: phospholipid biosynthetic process	7.49E-03
65	GO:0009851: auxin biosynthetic process	7.49E-03
66	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	7.85E-03
67	GO:0009630: gravitropism	8.22E-03
68	GO:0006464: cellular protein modification process	8.97E-03
69	GO:0009567: double fertilization forming a zygote and endosperm	8.97E-03
70	GO:0042128: nitrate assimilation	1.10E-02
71	GO:0015995: chlorophyll biosynthetic process	1.14E-02
72	GO:0010411: xyloglucan metabolic process	1.14E-02
73	GO:0018298: protein-chromophore linkage	1.22E-02
74	GO:0006811: ion transport	1.31E-02
75	GO:0009407: toxin catabolic process	1.31E-02
76	GO:0045087: innate immune response	1.45E-02
77	GO:0006099: tricarboxylic acid cycle	1.49E-02
78	GO:0008152: metabolic process	1.68E-02
79	GO:0009640: photomorphogenesis	1.73E-02
80	GO:0009636: response to toxic substance	1.88E-02
81	GO:0000165: MAPK cascade	1.98E-02
82	GO:0009585: red, far-red light phototransduction	2.14E-02
83	GO:0006813: potassium ion transport	2.14E-02
84	GO:0010224: response to UV-B	2.19E-02
85	GO:0006857: oligopeptide transport	2.25E-02
86	GO:0009620: response to fungus	2.58E-02
87	GO:0009416: response to light stimulus	2.71E-02
88	GO:0045893: positive regulation of transcription, DNA-templated	3.11E-02
89	GO:0055085: transmembrane transport	3.44E-02
90	GO:0010228: vegetative to reproductive phase transition of meristem	4.19E-02
91	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.40E-02
92	GO:0009617: response to bacterium	4.60E-02
93	GO:0010468: regulation of gene expression	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0015205: nucleobase transmembrane transporter activity	0.00E+00
2	GO:0047504: (-)-menthol dehydrogenase activity	0.00E+00
3	GO:0047501: (+)-neomenthol dehydrogenase activity	0.00E+00
4	GO:0000989: transcription factor activity, transcription factor binding	5.95E-07
5	GO:0008106: alcohol dehydrogenase (NADP+) activity	3.03E-06
6	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	7.75E-05
7	GO:0008066: glutamate receptor activity	7.75E-05
8	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	7.75E-05
9	GO:0010313: phytochrome binding	7.75E-05
10	GO:0071992: phytochelatin transmembrane transporter activity	7.75E-05
11	GO:0004307: ethanolaminephosphotransferase activity	7.75E-05
12	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	7.75E-05
13	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	7.75E-05
14	GO:0001530: lipopolysaccharide binding	7.75E-05
15	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	1.85E-04
16	GO:0030572: phosphatidyltransferase activity	1.85E-04
17	GO:0004142: diacylglycerol cholinephosphotransferase activity	1.85E-04
18	GO:0009973: adenylyl-sulfate reductase activity	1.85E-04
19	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	1.85E-04
20	GO:0004362: glutathione-disulfide reductase activity	1.85E-04
21	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	1.85E-04
22	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	1.85E-04
23	GO:0033201: alpha-1,4-glucan synthase activity	1.85E-04
24	GO:0050347: trans-octaprenyltranstransferase activity	1.85E-04
25	GO:0004373: glycogen (starch) synthase activity	3.11E-04
26	GO:0003913: DNA photolyase activity	3.11E-04
27	GO:0003935: GTP cyclohydrolase II activity	3.11E-04
28	GO:0004781: sulfate adenylyltransferase (ATP) activity	3.11E-04
29	GO:0004180: carboxypeptidase activity	3.11E-04
30	GO:0048027: mRNA 5'-UTR binding	4.49E-04
31	GO:0009011: starch synthase activity	5.98E-04
32	GO:0008177: succinate dehydrogenase (ubiquinone) activity	7.57E-04
33	GO:0000210: NAD+ diphosphatase activity	9.24E-04
34	GO:2001070: starch binding	9.24E-04
35	GO:0004709: MAP kinase kinase kinase activity	9.24E-04
36	GO:0016161: beta-amylase activity	1.10E-03
37	GO:0005261: cation channel activity	1.10E-03
38	GO:0009881: photoreceptor activity	1.29E-03
39	GO:0030674: protein binding, bridging	1.48E-03
40	GO:0019904: protein domain specific binding	2.61E-03
41	GO:0008559: xenobiotic-transporting ATPase activity	2.61E-03
42	GO:0005262: calcium channel activity	3.12E-03
43	GO:0005217: intracellular ligand-gated ion channel activity	3.66E-03
44	GO:0004970: ionotropic glutamate receptor activity	3.66E-03
45	GO:0030552: cAMP binding	3.66E-03
46	GO:0030553: cGMP binding	3.66E-03
47	GO:0008270: zinc ion binding	4.00E-03
48	GO:0005216: ion channel activity	4.52E-03
49	GO:0008324: cation transmembrane transporter activity	4.52E-03
50	GO:0004672: protein kinase activity	4.95E-03
51	GO:0030551: cyclic nucleotide binding	6.44E-03
52	GO:0005249: voltage-gated potassium channel activity	6.44E-03
53	GO:0004527: exonuclease activity	6.78E-03
54	GO:0042802: identical protein binding	6.82E-03
55	GO:0010181: FMN binding	7.13E-03
56	GO:0004518: nuclease activity	8.22E-03
57	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	8.59E-03
58	GO:0016413: O-acetyltransferase activity	9.75E-03
59	GO:0061630: ubiquitin protein ligase activity	1.08E-02
60	GO:0008236: serine-type peptidase activity	1.18E-02
61	GO:0015238: drug transmembrane transporter activity	1.27E-02
62	GO:0004871: signal transducer activity	1.29E-02
63	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.45E-02
64	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.54E-02
65	GO:0050661: NADP binding	1.59E-02
66	GO:0004364: glutathione transferase activity	1.68E-02
67	GO:0016491: oxidoreductase activity	1.80E-02
68	GO:0015293: symporter activity	1.88E-02
69	GO:0016298: lipase activity	2.19E-02
70	GO:0031625: ubiquitin protein ligase binding	2.30E-02
71	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.67E-02
72	GO:0015035: protein disulfide oxidoreductase activity	2.81E-02
73	GO:0016787: hydrolase activity	3.31E-02
74	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.54E-02
75	GO:0015297: antiporter activity	3.93E-02
76	GO:0005516: calmodulin binding	4.07E-02
77	GO:0005525: GTP binding	4.44E-02
78	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0031313: extrinsic component of endosome membrane	0.00E+00
2	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	7.75E-05
3	GO:0009526: plastid envelope	5.98E-04
4	GO:0031372: UBC13-MMS2 complex	5.98E-04
5	GO:0009501: amyloplast	1.48E-03
6	GO:0005884: actin filament	2.61E-03
7	GO:0031969: chloroplast membrane	1.03E-02
8	GO:0000325: plant-type vacuole	1.36E-02
9	GO:0005834: heterotrimeric G-protein complex	2.52E-02
10	GO:0010287: plastoglobule	3.11E-02
11	GO:0009543: chloroplast thylakoid lumen	3.23E-02
12	GO:0005615: extracellular space	4.40E-02