GO Enrichment Analysis of Co-expressed Genes with
AT5G42770
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 2 | GO:0034053: modulation by symbiont of host defense-related programmed cell death | 0.00E+00 |
| 3 | GO:0009249: protein lipoylation | 0.00E+00 |
| 4 | GO:0015822: ornithine transport | 0.00E+00 |
| 5 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 6 | GO:0036172: thiamine salvage | 0.00E+00 |
| 7 | GO:0034971: histone H3-R17 methylation | 5.94E-05 |
| 8 | GO:0000066: mitochondrial ornithine transport | 5.94E-05 |
| 9 | GO:0034970: histone H3-R2 methylation | 5.94E-05 |
| 10 | GO:0016031: tRNA import into mitochondrion | 5.94E-05 |
| 11 | GO:0034972: histone H3-R26 methylation | 5.94E-05 |
| 12 | GO:0043407: negative regulation of MAP kinase activity | 5.94E-05 |
| 13 | GO:0016122: xanthophyll metabolic process | 1.44E-04 |
| 14 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 1.44E-04 |
| 15 | GO:2000071: regulation of defense response by callose deposition | 1.44E-04 |
| 16 | GO:0034051: negative regulation of plant-type hypersensitive response | 2.46E-04 |
| 17 | GO:0009150: purine ribonucleotide metabolic process | 2.46E-04 |
| 18 | GO:0071492: cellular response to UV-A | 2.46E-04 |
| 19 | GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation | 2.46E-04 |
| 20 | GO:0009399: nitrogen fixation | 3.57E-04 |
| 21 | GO:0034613: cellular protein localization | 4.78E-04 |
| 22 | GO:0006542: glutamine biosynthetic process | 4.78E-04 |
| 23 | GO:0071486: cellular response to high light intensity | 4.78E-04 |
| 24 | GO:0009765: photosynthesis, light harvesting | 4.78E-04 |
| 25 | GO:0006749: glutathione metabolic process | 4.78E-04 |
| 26 | GO:0000956: nuclear-transcribed mRNA catabolic process | 4.78E-04 |
| 27 | GO:0010117: photoprotection | 6.05E-04 |
| 28 | GO:0009229: thiamine diphosphate biosynthetic process | 6.05E-04 |
| 29 | GO:0009107: lipoate biosynthetic process | 6.05E-04 |
| 30 | GO:0006544: glycine metabolic process | 6.05E-04 |
| 31 | GO:0042793: transcription from plastid promoter | 7.40E-04 |
| 32 | GO:0033365: protein localization to organelle | 7.40E-04 |
| 33 | GO:0006563: L-serine metabolic process | 7.40E-04 |
| 34 | GO:0016070: RNA metabolic process | 7.40E-04 |
| 35 | GO:0031053: primary miRNA processing | 7.40E-04 |
| 36 | GO:0009228: thiamine biosynthetic process | 7.40E-04 |
| 37 | GO:0009704: de-etiolation | 1.18E-03 |
| 38 | GO:0045292: mRNA cis splicing, via spliceosome | 1.18E-03 |
| 39 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.18E-03 |
| 40 | GO:0019430: removal of superoxide radicals | 1.35E-03 |
| 41 | GO:0010100: negative regulation of photomorphogenesis | 1.35E-03 |
| 42 | GO:0032544: plastid translation | 1.35E-03 |
| 43 | GO:0022900: electron transport chain | 1.35E-03 |
| 44 | GO:0098656: anion transmembrane transport | 1.52E-03 |
| 45 | GO:0035999: tetrahydrofolate interconversion | 1.69E-03 |
| 46 | GO:1900865: chloroplast RNA modification | 1.69E-03 |
| 47 | GO:0009688: abscisic acid biosynthetic process | 1.88E-03 |
| 48 | GO:0009682: induced systemic resistance | 2.07E-03 |
| 49 | GO:0006790: sulfur compound metabolic process | 2.27E-03 |
| 50 | GO:0000398: mRNA splicing, via spliceosome | 2.55E-03 |
| 51 | GO:0034976: response to endoplasmic reticulum stress | 3.11E-03 |
| 52 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 4.05E-03 |
| 53 | GO:0007005: mitochondrion organization | 4.05E-03 |
| 54 | GO:0010118: stomatal movement | 5.07E-03 |
| 55 | GO:0002229: defense response to oomycetes | 6.17E-03 |
| 56 | GO:0010193: response to ozone | 6.17E-03 |
| 57 | GO:0010090: trichome morphogenesis | 6.75E-03 |
| 58 | GO:0042128: nitrate assimilation | 8.60E-03 |
| 59 | GO:0009407: toxin catabolic process | 1.03E-02 |
| 60 | GO:0032259: methylation | 1.03E-02 |
| 61 | GO:0006281: DNA repair | 1.07E-02 |
| 62 | GO:0009867: jasmonic acid mediated signaling pathway | 1.13E-02 |
| 63 | GO:0034599: cellular response to oxidative stress | 1.17E-02 |
| 64 | GO:0006839: mitochondrial transport | 1.24E-02 |
| 65 | GO:0009636: response to toxic substance | 1.47E-02 |
| 66 | GO:0009965: leaf morphogenesis | 1.47E-02 |
| 67 | GO:0031347: regulation of defense response | 1.55E-02 |
| 68 | GO:0009585: red, far-red light phototransduction | 1.67E-02 |
| 69 | GO:0010224: response to UV-B | 1.71E-02 |
| 70 | GO:0009909: regulation of flower development | 1.80E-02 |
| 71 | GO:0006417: regulation of translation | 1.80E-02 |
| 72 | GO:0009620: response to fungus | 2.01E-02 |
| 73 | GO:0016569: covalent chromatin modification | 2.06E-02 |
| 74 | GO:0006396: RNA processing | 2.19E-02 |
| 75 | GO:0006457: protein folding | 2.48E-02 |
| 76 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.28E-02 |
| 77 | GO:0009826: unidimensional cell growth | 4.21E-02 |
| 78 | GO:0009658: chloroplast organization | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 2 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 3 | GO:0033549: MAP kinase phosphatase activity | 5.94E-05 |
| 4 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 1.44E-04 |
| 5 | GO:0017118: lipoyltransferase activity | 1.44E-04 |
| 6 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 1.44E-04 |
| 7 | GO:0016415: octanoyltransferase activity | 1.44E-04 |
| 8 | GO:0000064: L-ornithine transmembrane transporter activity | 1.44E-04 |
| 9 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 1.44E-04 |
| 10 | GO:0017176: phosphatidylinositol N-acetylglucosaminyltransferase activity | 2.46E-04 |
| 11 | GO:0008469: histone-arginine N-methyltransferase activity | 2.46E-04 |
| 12 | GO:0004848: ureidoglycolate hydrolase activity | 2.46E-04 |
| 13 | GO:0000339: RNA cap binding | 3.57E-04 |
| 14 | GO:0047627: adenylylsulfatase activity | 3.57E-04 |
| 15 | GO:0005319: lipid transporter activity | 4.78E-04 |
| 16 | GO:0004372: glycine hydroxymethyltransferase activity | 6.05E-04 |
| 17 | GO:0004356: glutamate-ammonia ligase activity | 6.05E-04 |
| 18 | GO:0008375: acetylglucosaminyltransferase activity | 6.38E-04 |
| 19 | GO:0008168: methyltransferase activity | 7.31E-04 |
| 20 | GO:0004784: superoxide dismutase activity | 7.40E-04 |
| 21 | GO:0071949: FAD binding | 1.52E-03 |
| 22 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.52E-03 |
| 23 | GO:0005315: inorganic phosphate transmembrane transporter activity | 2.47E-03 |
| 24 | GO:0015266: protein channel activity | 2.47E-03 |
| 25 | GO:0004725: protein tyrosine phosphatase activity | 3.11E-03 |
| 26 | GO:0005528: FK506 binding | 3.34E-03 |
| 27 | GO:0003756: protein disulfide isomerase activity | 4.55E-03 |
| 28 | GO:0008514: organic anion transmembrane transporter activity | 4.55E-03 |
| 29 | GO:0016787: hydrolase activity | 5.14E-03 |
| 30 | GO:0008080: N-acetyltransferase activity | 5.34E-03 |
| 31 | GO:0048038: quinone binding | 6.17E-03 |
| 32 | GO:0016168: chlorophyll binding | 8.28E-03 |
| 33 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.59E-03 |
| 34 | GO:0003723: RNA binding | 1.13E-02 |
| 35 | GO:0004364: glutathione transferase activity | 1.32E-02 |
| 36 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.43E-02 |
| 37 | GO:0043621: protein self-association | 1.43E-02 |
| 38 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.51E-02 |
| 39 | GO:0004386: helicase activity | 2.29E-02 |
| 40 | GO:0046872: metal ion binding | 2.66E-02 |
| 41 | GO:0030170: pyridoxal phosphate binding | 2.72E-02 |
| 42 | GO:0015144: carbohydrate transmembrane transporter activity | 2.86E-02 |
| 43 | GO:0005351: sugar:proton symporter activity | 3.12E-02 |
| 44 | GO:0003824: catalytic activity | 4.24E-02 |
| 45 | GO:0046982: protein heterodimerization activity | 4.27E-02 |
| 46 | GO:0004601: peroxidase activity | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.31E-07 |
| 2 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 5.94E-05 |
| 3 | GO:0005845: mRNA cap binding complex | 5.94E-05 |
| 4 | GO:0005846: nuclear cap binding complex | 1.44E-04 |
| 5 | GO:0042646: plastid nucleoid | 3.57E-04 |
| 6 | GO:1990726: Lsm1-7-Pat1 complex | 3.57E-04 |
| 7 | GO:0009536: plastid | 4.45E-04 |
| 8 | GO:0009517: PSII associated light-harvesting complex II | 4.78E-04 |
| 9 | GO:0009295: nucleoid | 5.12E-04 |
| 10 | GO:0097526: spliceosomal tri-snRNP complex | 6.05E-04 |
| 11 | GO:0005689: U12-type spliceosomal complex | 8.82E-04 |
| 12 | GO:0071004: U2-type prespliceosome | 1.18E-03 |
| 13 | GO:0005688: U6 snRNP | 1.18E-03 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.52E-03 |
| 15 | GO:0042644: chloroplast nucleoid | 1.52E-03 |
| 16 | GO:0071013: catalytic step 2 spliceosome | 2.07E-03 |
| 17 | GO:0009508: plastid chromosome | 2.47E-03 |
| 18 | GO:0015935: small ribosomal subunit | 3.81E-03 |
| 19 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 4.55E-03 |
| 20 | GO:0009941: chloroplast envelope | 4.67E-03 |
| 21 | GO:0009535: chloroplast thylakoid membrane | 5.50E-03 |
| 22 | GO:0009523: photosystem II | 5.89E-03 |
| 23 | GO:0031969: chloroplast membrane | 7.26E-03 |
| 24 | GO:0009707: chloroplast outer membrane | 9.59E-03 |
| 25 | GO:0009706: chloroplast inner membrane | 2.15E-02 |
| 26 | GO:0009579: thylakoid | 2.29E-02 |
| 27 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.29E-02 |
| 28 | GO:0009543: chloroplast thylakoid lumen | 2.52E-02 |
| 29 | GO:0009570: chloroplast stroma | 2.76E-02 |
| 30 | GO:0005840: ribosome | 4.05E-02 |
| 31 | GO:0005575: cellular_component | 4.61E-02 |
| 32 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.62E-02 |