co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G42750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010336: gibberellic acid homeostasis	0.00E+00
2	GO:0046460: neutral lipid biosynthetic process	0.00E+00
3	GO:0006044: N-acetylglucosamine metabolic process	0.00E+00
4	GO:0009946: proximal/distal axis specification	0.00E+00
5	GO:0051776: detection of redox state	0.00E+00
6	GO:0046294: formaldehyde catabolic process	0.00E+00
7	GO:0034971: histone H3-R17 methylation	7.07E-05
8	GO:0034970: histone H3-R2 methylation	7.07E-05
9	GO:0034972: histone H3-R26 methylation	7.07E-05
10	GO:1902265: abscisic acid homeostasis	7.07E-05
11	GO:0050826: response to freezing	1.23E-04
12	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	1.70E-04
13	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	1.70E-04
14	GO:0071712: ER-associated misfolded protein catabolic process	1.70E-04
15	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	2.86E-04
16	GO:0071492: cellular response to UV-A	2.86E-04
17	GO:0010476: gibberellin mediated signaling pathway	2.86E-04
18	GO:0010325: raffinose family oligosaccharide biosynthetic process	2.86E-04
19	GO:0010338: leaf formation	2.86E-04
20	GO:0031022: nuclear migration along microfilament	2.86E-04
21	GO:1902290: positive regulation of defense response to oomycetes	4.15E-04
22	GO:0006882: cellular zinc ion homeostasis	4.15E-04
23	GO:0009902: chloroplast relocation	5.53E-04
24	GO:0034613: cellular protein localization	5.53E-04
25	GO:0010109: regulation of photosynthesis	5.53E-04
26	GO:0071486: cellular response to high light intensity	5.53E-04
27	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	5.53E-04
28	GO:0009765: photosynthesis, light harvesting	5.53E-04
29	GO:0045088: regulation of innate immune response	5.53E-04
30	GO:0006749: glutathione metabolic process	5.53E-04
31	GO:0009615: response to virus	7.13E-04
32	GO:0006796: phosphate-containing compound metabolic process	8.57E-04
33	GO:0009117: nucleotide metabolic process	8.57E-04
34	GO:0010304: PSII associated light-harvesting complex II catabolic process	8.57E-04
35	GO:0051568: histone H3-K4 methylation	8.57E-04
36	GO:0009903: chloroplast avoidance movement	1.02E-03
37	GO:0048444: floral organ morphogenesis	1.02E-03
38	GO:0034389: lipid particle organization	1.02E-03
39	GO:0030026: cellular manganese ion homeostasis	1.19E-03
40	GO:0071446: cellular response to salicylic acid stimulus	1.19E-03
41	GO:0010928: regulation of auxin mediated signaling pathway	1.37E-03
42	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.37E-03
43	GO:0042255: ribosome assembly	1.37E-03
44	GO:1900150: regulation of defense response to fungus	1.37E-03
45	GO:0019430: removal of superoxide radicals	1.56E-03
46	GO:0010100: negative regulation of photomorphogenesis	1.56E-03
47	GO:2000031: regulation of salicylic acid mediated signaling pathway	1.56E-03
48	GO:0022900: electron transport chain	1.56E-03
49	GO:0009056: catabolic process	1.76E-03
50	GO:0015780: nucleotide-sugar transport	1.76E-03
51	GO:0019432: triglyceride biosynthetic process	1.76E-03
52	GO:0008356: asymmetric cell division	1.97E-03
53	GO:1900426: positive regulation of defense response to bacterium	1.97E-03
54	GO:0009751: response to salicylic acid	2.12E-03
55	GO:0055062: phosphate ion homeostasis	2.19E-03
56	GO:0006816: calcium ion transport	2.41E-03
57	GO:0030048: actin filament-based movement	2.88E-03
58	GO:0006071: glycerol metabolic process	3.63E-03
59	GO:0009944: polarity specification of adaxial/abaxial axis	3.89E-03
60	GO:0016575: histone deacetylation	4.17E-03
61	GO:0019915: lipid storage	4.44E-03
62	GO:0016226: iron-sulfur cluster assembly	4.73E-03
63	GO:0006012: galactose metabolic process	5.02E-03
64	GO:0009739: response to gibberellin	5.33E-03
65	GO:0009958: positive gravitropism	6.24E-03
66	GO:0010268: brassinosteroid homeostasis	6.24E-03
67	GO:0016132: brassinosteroid biosynthetic process	7.22E-03
68	GO:0032502: developmental process	7.56E-03
69	GO:0007264: small GTPase mediated signal transduction	7.56E-03
70	GO:1901657: glycosyl compound metabolic process	7.90E-03
71	GO:0006970: response to osmotic stress	7.93E-03
72	GO:0016125: sterol metabolic process	8.25E-03
73	GO:0016126: sterol biosynthetic process	9.34E-03
74	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.44E-03
75	GO:0010029: regulation of seed germination	9.71E-03
76	GO:0009816: defense response to bacterium, incompatible interaction	9.71E-03
77	GO:0042128: nitrate assimilation	1.01E-02
78	GO:0008219: cell death	1.13E-02
79	GO:0009407: toxin catabolic process	1.21E-02
80	GO:0009631: cold acclimation	1.25E-02
81	GO:0032259: methylation	1.29E-02
82	GO:0009637: response to blue light	1.33E-02
83	GO:0008643: carbohydrate transport	1.68E-02
84	GO:0009636: response to toxic substance	1.73E-02
85	GO:0009965: leaf morphogenesis	1.73E-02
86	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.82E-02
87	GO:0046686: response to cadmium ion	1.91E-02
88	GO:0009585: red, far-red light phototransduction	1.97E-02
89	GO:0051603: proteolysis involved in cellular protein catabolic process	2.01E-02
90	GO:0006857: oligopeptide transport	2.06E-02
91	GO:0009909: regulation of flower development	2.11E-02
92	GO:0055114: oxidation-reduction process	2.99E-02
93	GO:0007623: circadian rhythm	3.73E-02
94	GO:0010228: vegetative to reproductive phase transition of meristem	3.85E-02
95	GO:0008380: RNA splicing	4.23E-02
96	GO:0009617: response to bacterium	4.23E-02
97	GO:0009651: response to salt stress	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
2	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
3	GO:0004343: glucosamine 6-phosphate N-acetyltransferase activity	0.00E+00
4	GO:0046480: galactolipid galactosyltransferase activity	7.07E-05
5	GO:0080079: cellobiose glucosidase activity	7.07E-05
6	GO:0015085: calcium ion transmembrane transporter activity	7.07E-05
7	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	1.70E-04
8	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	1.70E-04
9	GO:0010331: gibberellin binding	1.70E-04
10	GO:0044390: ubiquitin-like protein conjugating enzyme binding	1.70E-04
11	GO:0035241: protein-arginine omega-N monomethyltransferase activity	1.70E-04
12	GO:0008469: histone-arginine N-methyltransferase activity	2.86E-04
13	GO:0019003: GDP binding	2.86E-04
14	GO:0035529: NADH pyrophosphatase activity	4.15E-04
15	GO:0000254: C-4 methylsterol oxidase activity	4.15E-04
16	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	5.53E-04
17	GO:0015368: calcium:cation antiporter activity	5.53E-04
18	GO:0015369: calcium:proton antiporter activity	5.53E-04
19	GO:0004784: superoxide dismutase activity	8.57E-04
20	GO:0008168: methyltransferase activity	9.69E-04
21	GO:0004144: diacylglycerol O-acyltransferase activity	1.02E-03
22	GO:0005338: nucleotide-sugar transmembrane transporter activity	1.19E-03
23	GO:0004427: inorganic diphosphatase activity	1.19E-03
24	GO:0004034: aldose 1-epimerase activity	1.37E-03
25	GO:0008047: enzyme activator activity	2.19E-03
26	GO:0004129: cytochrome-c oxidase activity	2.41E-03
27	GO:0022857: transmembrane transporter activity	2.62E-03
28	GO:0008378: galactosyltransferase activity	2.64E-03
29	GO:0008131: primary amine oxidase activity	3.12E-03
30	GO:0004176: ATP-dependent peptidase activity	4.44E-03
31	GO:0003727: single-stranded RNA binding	5.32E-03
32	GO:0008080: N-acetyltransferase activity	6.24E-03
33	GO:0016853: isomerase activity	6.56E-03
34	GO:0004518: nuclease activity	7.56E-03
35	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	7.90E-03
36	GO:0008237: metallopeptidase activity	8.61E-03
37	GO:0016168: chlorophyll binding	9.71E-03
38	GO:0004806: triglyceride lipase activity	1.05E-02
39	GO:0042803: protein homodimerization activity	1.15E-02
40	GO:0004222: metalloendopeptidase activity	1.21E-02
41	GO:0008422: beta-glucosidase activity	1.41E-02
42	GO:0004364: glutathione transferase activity	1.55E-02
43	GO:0004185: serine-type carboxypeptidase activity	1.59E-02
44	GO:0051537: 2 iron, 2 sulfur cluster binding	1.68E-02
45	GO:0020037: heme binding	1.94E-02
46	GO:0016787: hydrolase activity	2.85E-02
47	GO:0019843: rRNA binding	2.96E-02
48	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.02E-02
49	GO:0019825: oxygen binding	3.42E-02
50	GO:0015297: antiporter activity	3.61E-02
51	GO:0005516: calmodulin binding	3.61E-02
52	GO:0005506: iron ion binding	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0097708: intracellular vesicle	0.00E+00
2	GO:0030427: site of polarized growth	0.00E+00
3	GO:0036513: Derlin-1 retrotranslocation complex	4.15E-04
4	GO:0042646: plastid nucleoid	4.15E-04
5	GO:0000793: condensed chromosome	8.57E-04
6	GO:0031359: integral component of chloroplast outer membrane	1.19E-03
7	GO:0005811: lipid particle	1.56E-03
8	GO:0042644: chloroplast nucleoid	1.76E-03
9	GO:0030176: integral component of endoplasmic reticulum membrane	3.37E-03
10	GO:0009507: chloroplast	3.79E-03
11	GO:0015935: small ribosomal subunit	4.44E-03
12	GO:0009523: photosystem II	6.89E-03
13	GO:0009535: chloroplast thylakoid membrane	7.80E-03
14	GO:0016020: membrane	7.97E-03
15	GO:0016021: integral component of membrane	8.29E-03
16	GO:0009295: nucleoid	8.61E-03
17	GO:0005773: vacuole	8.65E-03
18	GO:0019005: SCF ubiquitin ligase complex	1.13E-02
19	GO:0009707: chloroplast outer membrane	1.13E-02
20	GO:0005819: spindle	1.41E-02
21	GO:0005789: endoplasmic reticulum membrane	1.87E-02
22	GO:0009534: chloroplast thylakoid	2.90E-02
23	GO:0005623: cell	3.02E-02
24	GO:0009705: plant-type vacuole membrane	3.73E-02
25	GO:0005615: extracellular space	4.04E-02