co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G42680

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015746: citrate transport	0.00E+00
2	GO:0070918: production of small RNA involved in gene silencing by RNA	0.00E+00
3	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
4	GO:0006432: phenylalanyl-tRNA aminoacylation	1.00E-04
5	GO:0034243: regulation of transcription elongation from RNA polymerase II promoter	1.00E-04
6	GO:0071712: ER-associated misfolded protein catabolic process	1.00E-04
7	GO:0032786: positive regulation of DNA-templated transcription, elongation	1.73E-04
8	GO:0045793: positive regulation of cell size	1.73E-04
9	GO:0006107: oxaloacetate metabolic process	2.55E-04
10	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.55E-04
11	GO:0032877: positive regulation of DNA endoreduplication	2.55E-04
12	GO:1902358: sulfate transmembrane transport	2.55E-04
13	GO:0006749: glutathione metabolic process	3.43E-04
14	GO:0032366: intracellular sterol transport	3.43E-04
15	GO:0051781: positive regulation of cell division	3.43E-04
16	GO:0006751: glutathione catabolic process	5.37E-04
17	GO:0045454: cell redox homeostasis	6.70E-04
18	GO:0009926: auxin polar transport	7.35E-04
19	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	7.49E-04
20	GO:0010044: response to aluminum ion	7.49E-04
21	GO:0009850: auxin metabolic process	8.61E-04
22	GO:0044030: regulation of DNA methylation	9.77E-04
23	GO:0009245: lipid A biosynthetic process	1.10E-03
24	GO:0006325: chromatin organization	1.35E-03
25	GO:0072593: reactive oxygen species metabolic process	1.49E-03
26	GO:0006378: mRNA polyadenylation	1.49E-03
27	GO:0006807: nitrogen compound metabolic process	1.77E-03
28	GO:0006108: malate metabolic process	1.77E-03
29	GO:0006071: glycerol metabolic process	2.23E-03
30	GO:0010228: vegetative to reproductive phase transition of meristem	2.43E-03
31	GO:0006306: DNA methylation	2.72E-03
32	GO:0015992: proton transport	2.72E-03
33	GO:0016226: iron-sulfur cluster assembly	2.89E-03
34	GO:0080092: regulation of pollen tube growth	2.89E-03
35	GO:0015991: ATP hydrolysis coupled proton transport	3.61E-03
36	GO:0006662: glycerol ether metabolic process	3.80E-03
37	GO:0015986: ATP synthesis coupled proton transport	3.99E-03
38	GO:0019761: glucosinolate biosynthetic process	4.58E-03
39	GO:0000910: cytokinesis	5.42E-03
40	GO:0006974: cellular response to DNA damage stimulus	6.09E-03
41	GO:0008219: cell death	6.77E-03
42	GO:0009407: toxin catabolic process	7.25E-03
43	GO:0045087: innate immune response	7.99E-03
44	GO:0009853: photorespiration	7.99E-03
45	GO:0034599: cellular response to oxidative stress	8.24E-03
46	GO:0009636: response to toxic substance	1.03E-02
47	GO:0006855: drug transmembrane transport	1.06E-02
48	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.09E-02
49	GO:0051726: regulation of cell cycle	1.57E-02
50	GO:0006633: fatty acid biosynthetic process	2.08E-02
51	GO:0009826: unidimensional cell growth	2.95E-02
52	GO:0042254: ribosome biogenesis	3.08E-02
53	GO:0080167: response to karrikin	3.54E-02
54	GO:0009751: response to salicylic acid	4.62E-02
55	GO:0006281: DNA repair	4.67E-02
56	GO:0006629: lipid metabolic process	4.67E-02
57	GO:0009408: response to heat	4.67E-02
58	GO:0006397: mRNA processing	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0050152: omega-amidase activity	0.00E+00
2	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
3	GO:0015137: citrate transmembrane transporter activity	4.04E-05
4	GO:0004826: phenylalanine-tRNA ligase activity	1.00E-04
5	GO:0044390: ubiquitin-like protein conjugating enzyme binding	1.00E-04
6	GO:0047364: desulfoglucosinolate sulfotransferase activity	1.00E-04
7	GO:0015035: protein disulfide oxidoreductase activity	1.11E-04
8	GO:0004751: ribose-5-phosphate isomerase activity	1.73E-04
9	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.95E-04
10	GO:0010178: IAA-amino acid conjugate hydrolase activity	2.55E-04
11	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	3.43E-04
12	GO:0000993: RNA polymerase II core binding	3.43E-04
13	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	3.43E-04
14	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	3.43E-04
15	GO:0010011: auxin binding	3.43E-04
16	GO:0050897: cobalt ion binding	5.28E-04
17	GO:0031177: phosphopantetheine binding	5.37E-04
18	GO:0000035: acyl binding	6.40E-04
19	GO:0042162: telomeric DNA binding	7.49E-04
20	GO:0008121: ubiquinol-cytochrome-c reductase activity	7.49E-04
21	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	8.61E-04
22	GO:0008271: secondary active sulfate transmembrane transporter activity	9.77E-04
23	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.10E-03
24	GO:0001055: RNA polymerase II activity	1.22E-03
25	GO:0008047: enzyme activator activity	1.35E-03
26	GO:0004129: cytochrome-c oxidase activity	1.49E-03
27	GO:0008794: arsenate reductase (glutaredoxin) activity	1.49E-03
28	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.49E-03
29	GO:0000049: tRNA binding	1.63E-03
30	GO:0015116: sulfate transmembrane transporter activity	1.63E-03
31	GO:0004089: carbonate dehydratase activity	1.77E-03
32	GO:0008146: sulfotransferase activity	2.07E-03
33	GO:0003727: single-stranded RNA binding	3.24E-03
34	GO:0047134: protein-disulfide reductase activity	3.42E-03
35	GO:0004791: thioredoxin-disulfide reductase activity	3.99E-03
36	GO:0004872: receptor activity	4.19E-03
37	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.79E-03
38	GO:0008237: metallopeptidase activity	5.21E-03
39	GO:0009055: electron carrier activity	6.98E-03
40	GO:0015238: drug transmembrane transporter activity	7.01E-03
41	GO:0003746: translation elongation factor activity	7.99E-03
42	GO:0003697: single-stranded DNA binding	7.99E-03
43	GO:0004364: glutathione transferase activity	9.27E-03
44	GO:0043621: protein self-association	1.01E-02
45	GO:0051537: 2 iron, 2 sulfur cluster binding	1.01E-02
46	GO:0015293: symporter activity	1.03E-02
47	GO:0016787: hydrolase activity	1.13E-02
48	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.18E-02
49	GO:0019843: rRNA binding	1.77E-02
50	GO:0015297: antiporter activity	2.15E-02
51	GO:0003729: mRNA binding	3.49E-02

Rank	GO Term	Adjusted P value
1	GO:0016469: proton-transporting two-sector ATPase complex	0.00E+00
2	GO:0032044: DSIF complex	4.04E-05
3	GO:0005750: mitochondrial respiratory chain complex III	6.26E-05
4	GO:0005753: mitochondrial proton-transporting ATP synthase complex	7.15E-05
5	GO:0000419: DNA-directed RNA polymerase V complex	8.11E-05
6	GO:0005697: telomerase holoenzyme complex	1.00E-04
7	GO:0005739: mitochondrion	2.53E-04
8	GO:0036513: Derlin-1 retrotranslocation complex	2.55E-04
9	GO:0005849: mRNA cleavage factor complex	2.55E-04
10	GO:0016471: vacuolar proton-transporting V-type ATPase complex	3.43E-04
11	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	3.43E-04
12	GO:0005788: endoplasmic reticulum lumen	3.73E-04
13	GO:0016591: DNA-directed RNA polymerase II, holoenzyme	4.37E-04
14	GO:0005746: mitochondrial respiratory chain	4.37E-04
15	GO:0000418: DNA-directed RNA polymerase IV complex	1.35E-03
16	GO:0005665: DNA-directed RNA polymerase II, core complex	1.63E-03
17	GO:0009508: plastid chromosome	1.77E-03
18	GO:0005759: mitochondrial matrix	2.12E-03
19	GO:0045271: respiratory chain complex I	2.55E-03
20	GO:0070469: respiratory chain	2.55E-03
21	GO:0005774: vacuolar membrane	4.93E-03
22	GO:0009295: nucleoid	5.21E-03
23	GO:0000325: plant-type vacuole	7.49E-03
24	GO:0005773: vacuole	9.42E-03
25	GO:0031966: mitochondrial membrane	1.12E-02
26	GO:0005747: mitochondrial respiratory chain complex I	1.35E-02
27	GO:0005654: nucleoplasm	1.74E-02
28	GO:0031225: anchored component of membrane	1.81E-02
29	GO:0005829: cytosol	2.43E-02
30	GO:0005840: ribosome	2.46E-02