GO Enrichment Analysis of Co-expressed Genes with
AT5G42030
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine | 0.00E+00 |
| 2 | GO:1904281: positive regulation of transcription from RNA polymerase V promoter | 0.00E+00 |
| 3 | GO:1990280: RNA localization to chromatin | 0.00E+00 |
| 4 | GO:0044030: regulation of DNA methylation | 3.93E-08 |
| 5 | GO:0019343: cysteine biosynthetic process via cystathionine | 9.19E-07 |
| 6 | GO:1902466: positive regulation of histone H3-K27 trimethylation | 9.19E-07 |
| 7 | GO:0071266: 'de novo' L-methionine biosynthetic process | 9.19E-07 |
| 8 | GO:1903705: positive regulation of production of siRNA involved in RNA interference | 9.19E-07 |
| 9 | GO:0019346: transsulfuration | 9.19E-07 |
| 10 | GO:0046653: tetrahydrofolate metabolic process | 8.12E-06 |
| 11 | GO:0006346: methylation-dependent chromatin silencing | 1.18E-05 |
| 12 | GO:0009396: folic acid-containing compound biosynthetic process | 3.12E-05 |
| 13 | GO:0035999: tetrahydrofolate interconversion | 5.67E-05 |
| 14 | GO:0080188: RNA-directed DNA methylation | 1.04E-04 |
| 15 | GO:0006730: one-carbon metabolic process | 1.49E-04 |
| 16 | GO:0006811: ion transport | 3.77E-04 |
| 17 | GO:0009853: photorespiration | 4.13E-04 |
| 18 | GO:0009658: chloroplast organization | 1.40E-03 |
| 19 | GO:0006810: transport | 6.48E-03 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004123: cystathionine gamma-lyase activity | 9.19E-07 |
| 2 | GO:0004121: cystathionine beta-lyase activity | 9.19E-07 |
| 3 | GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity | 2.63E-06 |
| 4 | GO:0004477: methenyltetrahydrofolate cyclohydrolase activity | 2.63E-06 |
| 5 | GO:0003962: cystathionine gamma-synthase activity | 5.06E-06 |
| 6 | GO:0000175: 3'-5'-exoribonuclease activity | 8.72E-05 |
| 7 | GO:0008408: 3'-5' exonuclease activity | 1.40E-04 |
| 8 | GO:0003727: single-stranded RNA binding | 1.68E-04 |
| 9 | GO:0022857: transmembrane transporter activity | 7.14E-04 |
| 10 | GO:0016746: transferase activity, transferring acyl groups | 7.57E-04 |
| 11 | GO:0030170: pyridoxal phosphate binding | 9.17E-04 |
| 12 | GO:0000166: nucleotide binding | 3.07E-03 |
| 13 | GO:0003824: catalytic activity | 5.30E-03 |
| 14 | GO:0003676: nucleic acid binding | 1.34E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046930: pore complex | 4.33E-05 |
| 2 | GO:0005654: nucleoplasm | 8.44E-04 |
| 3 | GO:0009507: chloroplast | 2.70E-03 |
| 4 | GO:0005622: intracellular | 4.54E-03 |
| 5 | GO:0005730: nucleolus | 7.15E-03 |
| 6 | GO:0009941: chloroplast envelope | 1.47E-02 |
| 7 | GO:0009570: chloroplast stroma | 1.86E-02 |